EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000004502 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 8111 bases
Position: chrJH208521.1:54964-63074
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000004815	zf-C2H2	PF00096.26	1.7e-55	1	9
ENSPSIP00000004815	zf-C2H2	PF00096.26	1.7e-55	2	9
ENSPSIP00000004815	zf-C2H2	PF00096.26	1.7e-55	3	9
ENSPSIP00000004815	zf-C2H2	PF00096.26	1.7e-55	4	9
ENSPSIP00000004815	zf-C2H2	PF00096.26	1.7e-55	5	9
ENSPSIP00000004815	zf-C2H2	PF00096.26	1.7e-55	6	9
ENSPSIP00000004815	zf-C2H2	PF00096.26	1.7e-55	7	9
ENSPSIP00000004815	zf-C2H2	PF00096.26	1.7e-55	8	9
ENSPSIP00000004815	zf-C2H2	PF00096.26	1.7e-55	9	9
ENSPSIP00000004815	zf-met	PF12874.7	7.5e-11	1	2
ENSPSIP00000004815	zf-met	PF12874.7	7.5e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000004842	-	1593	-	ENSPSIP00000004815	530 (aa)	-	K7F9V5

Gene Model

Click here to download ENSPSIG00000004502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000004502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000004502	-	64	39.298	ENSPSIG00000004303	ZNF319	93	39.298
ENSPSIG00000004502	-	78	44.872	ENSPSIG00000002565	-	82	44.872
ENSPSIG00000004502	-	63	53.785	ENSPSIG00000002569	-	94	53.785
ENSPSIG00000004502	-	55	68.421	ENSPSIG00000009603	-	99	68.421
ENSPSIG00000004502	-	83	40.618	ENSPSIG00000010328	-	96	43.805
ENSPSIG00000004502	-	94	49.383	ENSPSIG00000016380	-	100	49.383
ENSPSIG00000004502	-	52	42.105	ENSPSIG00000004262	SNAI3	57	42.105
ENSPSIG00000004502	-	94	66.667	ENSPSIG00000005603	-	99	66.667
ENSPSIG00000004502	-	55	36.842	ENSPSIG00000012859	ZBTB41	61	36.842
ENSPSIG00000004502	-	62	60.996	ENSPSIG00000005128	-	100	63.158
ENSPSIG00000004502	-	54	52.174	ENSPSIG00000006790	-	88	52.174
ENSPSIG00000004502	-	56	47.335	ENSPSIG00000001026	-	98	47.335
ENSPSIG00000004502	-	87	45.878	ENSPSIG00000015465	-	99	50.000
ENSPSIG00000004502	-	52	45.342	ENSPSIG00000012112	GFI1B	56	45.342
ENSPSIG00000004502	-	57	32.867	ENSPSIG00000011722	GTF3A	74	32.867
ENSPSIG00000004502	-	52	49.153	ENSPSIG00000004682	ZNF652	65	49.123
ENSPSIG00000004502	-	84	44.898	ENSPSIG00000009893	-	99	44.898
ENSPSIG00000004502	-	89	67.890	ENSPSIG00000010248	-	97	67.890
ENSPSIG00000004502	-	80	51.220	ENSPSIG00000003152	-	88	51.220
ENSPSIG00000004502	-	94	58.140	ENSPSIG00000015459	-	100	58.491
ENSPSIG00000004502	-	61	39.423	ENSPSIG00000013505	PRDM5	83	39.423
ENSPSIG00000004502	-	58	37.069	ENSPSIG00000006768	OVOL2	52	37.069
ENSPSIG00000004502	-	52	41.284	ENSPSIG00000011896	ZIC3	50	41.284
ENSPSIG00000004502	-	52	36.283	ENSPSIG00000002538	ZNF521	52	36.283
ENSPSIG00000004502	-	88	56.579	ENSPSIG00000005672	-	100	63.317
ENSPSIG00000004502	-	78	48.052	ENSPSIG00000012650	-	95	48.582
ENSPSIG00000004502	-	59	61.033	ENSPSIG00000010405	-	99	61.033
ENSPSIG00000004502	-	53	35.465	ENSPSIG00000016553	-	53	35.465
ENSPSIG00000004502	-	88	68.508	ENSPSIG00000013021	-	100	68.508
ENSPSIG00000004502	-	71	67.956	ENSPSIG00000000075	-	91	67.956
ENSPSIG00000004502	-	61	42.857	ENSPSIG00000001739	-	99	42.857
ENSPSIG00000004502	-	69	50.739	ENSPSIG00000000522	-	100	50.739
ENSPSIG00000004502	-	63	71.429	ENSPSIG00000004614	-	95	71.429
ENSPSIG00000004502	-	55	49.495	ENSPSIG00000016033	-	53	49.495
ENSPSIG00000004502	-	61	41.969	ENSPSIG00000018010	ZBTB47	51	41.969
ENSPSIG00000004502	-	58	43.621	ENSPSIG00000000672	-	87	41.250
ENSPSIG00000004502	-	60	48.954	ENSPSIG00000008588	-	100	48.954
ENSPSIG00000004502	-	55	43.421	ENSPSIG00000003607	SNAI1	59	43.421
ENSPSIG00000004502	-	88	37.853	ENSPSIG00000009270	-	87	41.825
ENSPSIG00000004502	-	73	49.367	ENSPSIG00000015216	-	99	51.415
ENSPSIG00000004502	-	71	62.195	ENSPSIG00000000333	-	99	62.195
ENSPSIG00000004502	-	87	49.648	ENSPSIG00000012865	-	98	52.206
ENSPSIG00000004502	-	59	47.826	ENSPSIG00000009650	-	79	48.971
ENSPSIG00000004502	-	61	34.759	ENSPSIG00000005522	ZNF646	98	34.759
ENSPSIG00000004502	-	55	51.429	ENSPSIG00000000943	ZNF770	99	51.429
ENSPSIG00000004502	-	78	47.845	ENSPSIG00000016247	-	83	47.845
ENSPSIG00000004502	-	57	39.754	ENSPSIG00000006586	-	99	39.754
ENSPSIG00000004502	-	55	31.330	ENSPSIG00000011562	-	84	31.330
ENSPSIG00000004502	-	55	45.769	ENSPSIG00000000760	-	92	45.769
ENSPSIG00000004502	-	57	36.697	ENSPSIG00000002913	OVOL1	59	36.697
ENSPSIG00000004502	-	51	43.421	ENSPSIG00000016395	SNAI2	51	43.421
ENSPSIG00000004502	-	53	44.751	ENSPSIG00000008734	GFI1	50	44.751

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000004502	-	90	52.091	ENSACAG00000024956	-	99	52.091	Anolis_carolinensis
ENSPSIG00000004502	-	54	45.050	ENSACAG00000024898	-	98	45.050	Anolis_carolinensis
ENSPSIG00000004502	-	61	52.632	ENSACAG00000008664	-	69	52.632	Anolis_carolinensis
ENSPSIG00000004502	-	53	50.562	ENSAMXG00000038325	-	92	50.562	Astyanax_mexicanus
ENSPSIG00000004502	-	54	57.500	ENSAMXG00000042784	-	92	57.500	Astyanax_mexicanus
ENSPSIG00000004502	-	59	54.601	ENSAMXG00000034847	-	85	54.601	Astyanax_mexicanus
ENSPSIG00000004502	-	59	52.713	ENSAMXG00000042746	-	84	52.713	Astyanax_mexicanus
ENSPSIG00000004502	-	51	56.044	ENSAMXG00000036233	-	77	56.044	Astyanax_mexicanus
ENSPSIG00000004502	-	59	59.898	ENSAMXG00000025452	-	94	59.898	Astyanax_mexicanus
ENSPSIG00000004502	-	62	54.286	ENSAMXG00000032841	-	81	54.286	Astyanax_mexicanus
ENSPSIG00000004502	-	59	53.488	ENSAMXG00000038536	-	84	53.488	Astyanax_mexicanus
ENSPSIG00000004502	-	56	59.533	ENSAMXG00000038636	-	99	59.533	Astyanax_mexicanus
ENSPSIG00000004502	-	55	45.890	ENSAMXG00000035246	-	66	45.890	Astyanax_mexicanus
ENSPSIG00000004502	-	63	52.963	ENSAMXG00000010805	-	96	52.963	Astyanax_mexicanus
ENSPSIG00000004502	-	59	55.665	ENSAMXG00000034344	-	74	55.665	Astyanax_mexicanus
ENSPSIG00000004502	-	54	39.781	ENSBTAG00000038322	-	76	39.781	Bos_taurus
ENSPSIG00000004502	-	59	44.218	ENSCPBG00000001526	-	80	44.218	Chrysemys_picta_bellii
ENSPSIG00000004502	-	57	37.049	ENSCPBG00000013652	-	69	38.811	Chrysemys_picta_bellii
ENSPSIG00000004502	-	83	50.943	ENSCPBG00000026433	-	87	50.943	Chrysemys_picta_bellii
ENSPSIG00000004502	-	85	37.500	ENSCPBG00000008580	-	100	37.500	Chrysemys_picta_bellii
ENSPSIG00000004502	-	54	49.143	ENSCSAVG00000010960	-	100	49.143	Ciona_savignyi
ENSPSIG00000004502	-	54	39.914	ENSDNOG00000047495	-	79	39.914	Dasypus_novemcinctus
ENSPSIG00000004502	-	66	43.561	ENSEBUG00000011694	-	95	43.561	Eptatretus_burgeri
ENSPSIG00000004502	-	73	36.194	ENSEBUG00000013875	-	94	37.333	Eptatretus_burgeri
ENSPSIG00000004502	-	54	46.269	ENSEBUG00000015837	-	78	46.269	Eptatretus_burgeri
ENSPSIG00000004502	-	57	42.966	ENSEBUG00000002075	-	65	43.015	Eptatretus_burgeri
ENSPSIG00000004502	-	66	46.875	ENSEBUG00000012919	-	81	46.875	Eptatretus_burgeri
ENSPSIG00000004502	-	65	40.625	ENSEBUG00000014717	-	74	40.625	Eptatretus_burgeri
ENSPSIG00000004502	-	59	42.754	ENSEBUG00000005264	-	84	42.754	Eptatretus_burgeri
ENSPSIG00000004502	-	65	47.186	ENSEBUG00000008306	-	79	47.186	Eptatretus_burgeri
ENSPSIG00000004502	-	58	47.186	ENSEBUG00000011435	-	79	44.788	Eptatretus_burgeri
ENSPSIG00000004502	-	60	39.860	ENSEASG00005004469	-	70	39.860	Equus_asinus_asinus
ENSPSIG00000004502	-	54	44.059	ENSGMOG00000018506	-	100	44.059	Gadus_morhua
ENSPSIG00000004502	-	56	53.883	ENSGALG00000046336	-	99	53.883	Gallus_gallus
ENSPSIG00000004502	-	60	47.902	ENSGALG00000053507	-	78	47.902	Gallus_gallus
ENSPSIG00000004502	-	94	55.078	ENSGALG00000044069	-	85	55.078	Gallus_gallus
ENSPSIG00000004502	-	55	43.774	ENSGALG00000049609	-	56	44.488	Gallus_gallus
ENSPSIG00000004502	-	82	50.000	ENSGALG00000055127	-	89	49.242	Gallus_gallus
ENSPSIG00000004502	-	66	50.923	ENSGALG00000054325	-	99	50.923	Gallus_gallus
ENSPSIG00000004502	-	52	48.905	ENSGACG00000006283	-	95	48.905	Gasterosteus_aculeatus
ENSPSIG00000004502	-	55	50.216	ENSGAGG00000011399	-	90	50.216	Gopherus_agassizii
ENSPSIG00000004502	-	54	50.000	ENSGAGG00000018885	-	65	50.000	Gopherus_agassizii
ENSPSIG00000004502	-	62	48.913	ENSGAGG00000011366	-	88	48.913	Gopherus_agassizii
ENSPSIG00000004502	-	62	42.029	ENSHCOG00000018201	-	84	42.735	Hippocampus_comes
ENSPSIG00000004502	-	71	42.574	ENSIPUG00000012109	ZN12	59	42.574	Ictalurus_punctatus
ENSPSIG00000004502	-	55	53.390	ENSIPUG00000021515	-	85	52.669	Ictalurus_punctatus
ENSPSIG00000004502	-	63	51.601	ENSIPUG00000015468	-	88	58.007	Ictalurus_punctatus
ENSPSIG00000004502	-	58	52.074	ENSJJAG00000023633	Zfp672	89	52.074	Jaculus_jaculus
ENSPSIG00000004502	-	93	49.580	ENSLACG00000022211	-	98	49.580	Latimeria_chalumnae
ENSPSIG00000004502	-	58	39.409	ENSLACG00000009005	-	99	39.409	Latimeria_chalumnae
ENSPSIG00000004502	-	57	41.667	ENSLACG00000005264	-	96	41.667	Latimeria_chalumnae
ENSPSIG00000004502	-	52	42.697	ENSLOCG00000014210	-	50	42.697	Lepisosteus_oculatus
ENSPSIG00000004502	-	56	40.271	ENSLOCG00000017864	-	99	40.271	Lepisosteus_oculatus
ENSPSIG00000004502	-	70	50.725	ENSMGAG00000013362	-	100	50.725	Meleagris_gallopavo
ENSPSIG00000004502	-	57	52.018	ENSMAUG00000009945	Zfp672	88	52.018	Mesocricetus_auratus
ENSPSIG00000004502	-	54	45.390	ENSMMOG00000003923	-	75	45.390	Mola_mola
ENSPSIG00000004502	-	89	46.038	ENSMODG00000001880	-	99	46.038	Monodelphis_domestica
ENSPSIG00000004502	-	83	47.594	ENSMODG00000010532	-	98	47.594	Monodelphis_domestica
ENSPSIG00000004502	-	89	49.102	MGP_CAROLIEiJ_G0030502	-	96	49.102	Mus_caroli
ENSPSIG00000004502	-	55	49.784	MGP_CAROLIEiJ_G0016391	Zfp672	96	51.220	Mus_caroli
ENSPSIG00000004502	-	86	47.143	ENSMUSG00000030823	9130019O22Rik	91	47.143	Mus_musculus
ENSPSIG00000004502	-	54	48.413	MGP_SPRETEiJ_G0031613	-	84	48.413	Mus_spretus
ENSPSIG00000004502	-	55	49.784	MGP_SPRETEiJ_G0017233	Zfp672	91	51.111	Mus_spretus
ENSPSIG00000004502	-	86	41.754	ENSNGAG00000015777	Zim1	94	41.754	Nannospalax_galili
ENSPSIG00000004502	-	59	43.607	ENSNBRG00000000708	-	86	43.607	Neolamprologus_brichardi
ENSPSIG00000004502	-	54	42.202	ENSNBRG00000007276	-	51	42.202	Neolamprologus_brichardi
ENSPSIG00000004502	-	52	50.000	ENSORLG00020001922	-	85	44.144	Oryzias_latipes_hni
ENSPSIG00000004502	-	59	49.580	ENSOMEG00000001598	-	65	49.580	Oryzias_melastigma
ENSPSIG00000004502	-	63	42.857	ENSPREG00000002642	-	92	44.403	Poecilia_reticulata
ENSPSIG00000004502	-	54	45.238	ENSPNYG00000015486	-	59	45.238	Pundamilia_nyererei
ENSPSIG00000004502	-	60	54.891	ENSPNAG00000000088	-	98	54.891	Pygocentrus_nattereri
ENSPSIG00000004502	-	52	52.153	ENSPNAG00000018395	-	59	52.336	Pygocentrus_nattereri
ENSPSIG00000004502	-	55	49.351	ENSRNOG00000002713	Zfp672	90	49.351	Rattus_norvegicus
ENSPSIG00000004502	-	85	45.185	ENSSHAG00000018106	-	99	45.185	Sarcophilus_harrisii
ENSPSIG00000004502	-	54	55.794	ENSSFOG00015019818	-	69	55.794	Scleropages_formosus
ENSPSIG00000004502	-	62	40.851	ENSSMAG00000004252	-	90	41.202	Scophthalmus_maximus
ENSPSIG00000004502	-	72	49.367	ENSSPUG00000004366	-	67	49.020	Sphenodon_punctatus
ENSPSIG00000004502	-	57	47.719	ENSSPUG00000010016	-	94	47.719	Sphenodon_punctatus
ENSPSIG00000004502	-	52	50.909	ENSSPAG00000021653	-	79	50.909	Stegastes_partitus
ENSPSIG00000004502	-	54	54.128	ENSTGUG00000018351	-	100	54.128	Taeniopygia_guttata
ENSPSIG00000004502	-	59	48.529	ENSTGUG00000015210	-	100	50.000	Taeniopygia_guttata
ENSPSIG00000004502	-	84	44.199	ENSTRUG00000022066	-	88	43.750	Takifugu_rubripes
ENSPSIG00000004502	-	54	46.154	ENSXETG00000031192	-	100	46.154	Xenopus_tropicalis
ENSPSIG00000004502	-	63	55.385	ENSXCOG00000006553	-	87	55.385	Xiphophorus_couchianus
ENSPSIG00000004502	-	59	40.541	ENSXMAG00000026680	-	82	40.541	Xiphophorus_maculatus