EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000004614 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 8718 bases
Position: chrJH211018.1:19623-28340
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	1	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	2	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	3	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	4	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	5	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	6	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	7	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	8	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	9	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	10	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	11	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	12	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	13	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	14	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	15	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	16	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	17	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	18	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	19	20
ENSPSIP00000004940	zf-C2H2	PF00096.26	5.7e-127	20	20
ENSPSIP00000004940	zf-met	PF12874.7	5.7e-16	1	2
ENSPSIP00000004940	zf-met	PF12874.7	5.7e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000004968	-	2245	-	ENSPSIP00000004940	673 (aa)	-	K7FA80

Gene Model

Click here to download ENSPSIG00000004614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000004614's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000004614	-	83	47.273	ENSPSIG00000009066	SALL4	56	47.059
ENSPSIG00000004614	-	94	57.971	ENSPSIG00000001026	-	91	57.971
ENSPSIG00000004614	-	99	60.116	ENSPSIG00000012865	-	99	61.635
ENSPSIG00000004614	-	98	55.298	ENSPSIG00000009650	-	87	53.822
ENSPSIG00000004614	-	86	47.328	ENSPSIG00000000333	-	79	47.328
ENSPSIG00000004614	-	94	52.308	ENSPSIG00000000672	-	93	52.308
ENSPSIG00000004614	-	99	56.272	ENSPSIG00000016380	-	98	56.272
ENSPSIG00000004614	-	88	44.928	ENSPSIG00000000943	ZNF770	99	44.928
ENSPSIG00000004614	-	87	59.833	ENSPSIG00000016247	-	60	59.833
ENSPSIG00000004614	-	83	38.235	ENSPSIG00000006768	OVOL2	64	38.235
ENSPSIG00000004614	-	87	38.426	ENSPSIG00000004682	ZNF652	69	38.426
ENSPSIG00000004614	-	95	35.260	ENSPSIG00000004303	ZNF319	96	35.309
ENSPSIG00000004614	-	91	41.239	ENSPSIG00000000760	-	91	41.599
ENSPSIG00000004614	-	86	41.071	ENSPSIG00000011896	ZIC3	55	41.071
ENSPSIG00000004614	-	89	55.946	ENSPSIG00000010405	-	99	57.292
ENSPSIG00000004614	-	99	50.856	ENSPSIG00000010248	-	94	50.856
ENSPSIG00000004614	-	84	48.259	ENSPSIG00000012650	-	87	48.259
ENSPSIG00000004614	-	88	62.771	ENSPSIG00000015216	-	80	62.771
ENSPSIG00000004614	-	97	47.119	ENSPSIG00000000075	-	76	47.119
ENSPSIG00000004614	-	87	35.294	ENSPSIG00000016395	SNAI2	56	35.294
ENSPSIG00000004614	-	87	52.632	ENSPSIG00000004647	-	57	52.632
ENSPSIG00000004614	-	99	49.719	ENSPSIG00000005603	-	96	49.719
ENSPSIG00000004614	-	91	47.015	ENSPSIG00000008734	GFI1	53	47.015
ENSPSIG00000004614	-	88	46.341	ENSPSIG00000005128	-	100	46.606
ENSPSIG00000004614	-	83	39.610	ENSPSIG00000013505	PRDM5	73	39.610
ENSPSIG00000004614	-	89	58.621	ENSPSIG00000000522	-	91	58.621
ENSPSIG00000004614	-	99	47.426	ENSPSIG00000013021	-	98	47.426
ENSPSIG00000004614	-	100	78.571	ENSPSIG00000002565	-	83	78.571
ENSPSIG00000004614	-	87	60.227	ENSPSIG00000002569	-	78	60.227
ENSPSIG00000004614	-	97	65.019	ENSPSIG00000009893	-	99	64.259
ENSPSIG00000004614	-	89	58.889	ENSPSIG00000006790	-	94	58.889
ENSPSIG00000004614	-	99	49.034	ENSPSIG00000015459	-	97	48.297
ENSPSIG00000004614	-	88	45.614	ENSPSIG00000006586	-	99	45.614
ENSPSIG00000004614	-	87	31.395	ENSPSIG00000011562	-	91	32.796
ENSPSIG00000004614	-	94	37.016	ENSPSIG00000005522	ZNF646	99	36.791
ENSPSIG00000004614	-	99	45.455	ENSPSIG00000005672	-	99	45.455
ENSPSIG00000004614	-	88	53.218	ENSPSIG00000009603	-	99	52.882
ENSPSIG00000004614	-	86	38.519	ENSPSIG00000004262	SNAI3	53	38.519
ENSPSIG00000004614	-	71	34.965	ENSPSIG00000011722	GTF3A	71	34.965
ENSPSIG00000004614	-	99	55.285	ENSPSIG00000015465	-	99	55.285
ENSPSIG00000004614	-	83	37.288	ENSPSIG00000002913	OVOL1	64	37.288
ENSPSIG00000004614	-	88	46.358	ENSPSIG00000012112	GFI1B	72	46.358
ENSPSIG00000004614	-	96	31.169	ENSPSIG00000016553	-	68	31.169
ENSPSIG00000004614	-	99	47.561	ENSPSIG00000010328	-	97	47.561
ENSPSIG00000004614	-	89	46.931	ENSPSIG00000009270	-	87	43.176
ENSPSIG00000004614	-	89	34.559	ENSPSIG00000003607	SNAI1	60	34.559
ENSPSIG00000004614	-	87	47.345	ENSPSIG00000001739	-	100	47.867
ENSPSIG00000004614	-	90	48.832	ENSPSIG00000003152	-	82	48.852
ENSPSIG00000004614	-	95	71.429	ENSPSIG00000004502	-	63	71.429
ENSPSIG00000004614	-	87	47.992	ENSPSIG00000008588	-	100	47.992

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000004614	-	94	58.528	ENSBTAG00000038088	-	100	58.528	Bos_taurus
ENSPSIG00000004614	-	99	59.030	ENSCAFG00000029340	-	100	59.030	Canis_familiaris
ENSPSIG00000004614	-	94	59.030	ENSCAFG00020014950	-	96	59.030	Canis_lupus_dingo
ENSPSIG00000004614	-	96	56.837	ENSCAFG00020014929	-	100	58.276	Canis_lupus_dingo
ENSPSIG00000004614	-	99	63.230	ENSCPBG00000017494	-	99	59.780	Chrysemys_picta_bellii
ENSPSIG00000004614	-	98	56.743	ENSEASG00005020355	-	100	56.743	Equus_asinus_asinus
ENSPSIG00000004614	-	94	57.827	ENSEASG00005020335	-	96	59.310	Equus_asinus_asinus
ENSPSIG00000004614	-	93	60.342	ENSECAG00000002193	-	96	60.342	Equus_caballus
ENSPSIG00000004614	-	99	55.556	ENSECAG00000013505	-	99	55.556	Equus_caballus
ENSPSIG00000004614	-	98	56.557	ENSECAG00000002021	-	97	53.908	Equus_caballus
ENSPSIG00000004614	-	99	64.775	ENSGAGG00000020594	-	99	62.287	Gopherus_agassizii
ENSPSIG00000004614	-	98	48.000	ENSLACG00000004191	-	91	48.000	Latimeria_chalumnae
ENSPSIG00000004614	-	99	56.706	ENSMPUG00000008442	-	100	56.766	Mustela_putorius_furo
ENSPSIG00000004614	-	99	58.194	ENSMPUG00000006213	-	100	58.194	Mustela_putorius_furo
ENSPSIG00000004614	-	94	58.528	ENSOARG00000003770	-	96	58.528	Ovis_aries
ENSPSIG00000004614	-	99	56.190	ENSPPAG00000037706	-	99	56.190	Pan_paniscus
ENSPSIG00000004614	-	99	56.420	ENSSBOG00000022380	-	97	57.217	Saimiri_boliviensis_boliviensis
ENSPSIG00000004614	-	99	56.036	ENSSSCG00000031774	-	100	56.036	Sus_scrofa
ENSPSIG00000004614	-	98	55.786	ENSUAMG00000027381	-	95	55.786	Ursus_americanus
ENSPSIG00000004614	-	97	58.784	ENSUAMG00000028270	-	90	58.784	Ursus_americanus
ENSPSIG00000004614	-	98	55.786	ENSUMAG00000004061	-	95	55.786	Ursus_maritimus
ENSPSIG00000004614	-	94	53.610	ENSUMAG00000004054	-	98	53.610	Ursus_maritimus
ENSPSIG00000004614	-	94	59.030	ENSVVUG00000001996	-	96	59.030	Vulpes_vulpes
ENSPSIG00000004614	-	91	56.042	ENSVVUG00000002085	-	90	56.042	Vulpes_vulpes