EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPSIG00000004679 (Gene tree)
Gene ID
102457641
Gene Symbol
PUF60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Pelodiscus_sinensis
Status
putative
Strand
Minus strand
Length
16862 bases
Position
chrJH210345.1:467411-484272
Accession
102457641
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPSIP00000005010RRM_1PF00076.226.3e-4412
ENSPSIP00000005010RRM_1PF00076.226.3e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPSIT00000005039PUF60-2011848XM_006128725ENSPSIP00000005010527 (aa)XP_006128787K7FAF0
Gene Model
Click here to download ENSPSIG00000004679's gene model file
Pathways
Pathway IDPathway NameSource
pss03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000004679's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPSIG00000004679PUF609997.897ENSG00000179950PUF6010098.062Homo_sapiens
ENSPSIG00000004679PUF609985.389ENSAPOG00000001713puf60b9985.389Acanthochromis_polyacanthus
ENSPSIG00000004679PUF609996.176ENSAMEG00000006406PUF609496.176Ailuropoda_melanoleuca
ENSPSIG00000004679PUF609885.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSPSIG00000004679PUF609877.159ENSACIG00000003263-9977.395Amphilophus_citrinellus
ENSPSIG00000004679PUF609981.096ENSAOCG00000015558-9981.664Amphiprion_ocellaris
ENSPSIG00000004679PUF609985.389ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSPSIG00000004679PUF609979.773ENSAPEG00000011923puf60b9979.773Amphiprion_percula
ENSPSIG00000004679PUF609872.553ENSAPEG00000001836-9973.574Amphiprion_percula
ENSPSIG00000004679PUF609980.952ENSATEG00000006303-9981.179Anabas_testudineus
ENSPSIG00000004679PUF609985.444ENSATEG00000001730puf60b9985.444Anabas_testudineus
ENSPSIG00000004679PUF609998.659ENSAPLG00000010150PUF6010098.659Anas_platyrhynchos
ENSPSIG00000004679PUF609997.137ENSACAG00000001645PUF609797.137Anolis_carolinensis
ENSPSIG00000004679PUF609997.897ENSANAG00000018626PUF6010098.062Aotus_nancymaae
ENSPSIG00000004679PUF609885.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSPSIG00000004679PUF609876.636ENSAMXG00000041030puf60b10074.157Astyanax_mexicanus
ENSPSIG00000004679PUF609984.045ENSAMXG00000036570puf60a10081.455Astyanax_mexicanus
ENSPSIG00000004679PUF609998.088ENSBTAG00000037493PUF609998.084Bos_taurus
ENSPSIG00000004679PUF608050.162WBGene00004389rnp-68351.485Caenorhabditis_elegans
ENSPSIG00000004679PUF609998.088ENSCJAG00000021485PUF609898.084Callithrix_jacchus
ENSPSIG00000004679PUF609997.897ENSCAFG00000001400PUF609397.897Canis_familiaris
ENSPSIG00000004679PUF609998.279ENSCAFG00020018754PUF609898.276Canis_lupus_dingo
ENSPSIG00000004679PUF609998.088ENSCHIG00000001618PUF608798.088Capra_hircus
ENSPSIG00000004679PUF609998.470ENSTSYG00000011912PUF6010098.450Carlito_syrichta
ENSPSIG00000004679PUF609992.600ENSCPOG00000014613PUF609492.600Cavia_porcellus
ENSPSIG00000004679PUF609997.897ENSCCAG00000007744PUF609897.893Cebus_capucinus
ENSPSIG00000004679PUF609997.897ENSCATG00000035405PUF609897.893Cercocebus_atys
ENSPSIG00000004679PUF609998.470ENSCLAG00000009154PUF609398.470Chinchilla_lanigera
ENSPSIG00000004679PUF609898.062ENSCSAG00000008878PUF6010098.062Chlorocebus_sabaeus
ENSPSIG00000004679PUF609999.234ENSCPBG00000005595PUF609899.234Chrysemys_picta_bellii
ENSPSIG00000004679PUF606259.882ENSCING00000002156-8759.882Ciona_intestinalis
ENSPSIG00000004679PUF609948.609ENSCING00000008436-9848.496Ciona_intestinalis
ENSPSIG00000004679PUF609555.556ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSPSIG00000004679PUF609549.407ENSCSAVG00000004765-9749.304Ciona_savignyi
ENSPSIG00000004679PUF607998.321ENSCANG00000041843PUF6010098.321Colobus_angolensis_palliatus
ENSPSIG00000004679PUF609997.897ENSCGRG00001017442Puf609397.897Cricetulus_griseus_chok1gshd
ENSPSIG00000004679PUF609997.897ENSCGRG00000003717Puf609397.897Cricetulus_griseus_crigri
ENSPSIG00000004679PUF609985.009ENSCSEG00000019887puf60b9384.630Cynoglossus_semilaevis
ENSPSIG00000004679PUF609872.275ENSCSEG00000014845-8974.570Cynoglossus_semilaevis
ENSPSIG00000004679PUF608980.421ENSCVAG00000001560-9880.042Cyprinodon_variegatus
ENSPSIG00000004679PUF609884.453ENSCVAG00000009386puf60b10085.605Cyprinodon_variegatus
ENSPSIG00000004679PUF609886.932ENSDARG00000032175puf60a9993.617Danio_rerio
ENSPSIG00000004679PUF609878.571ENSDARG00000001241puf60b9995.238Danio_rerio
ENSPSIG00000004679PUF609683.235ENSDNOG00000043278PUF609083.235Dasypus_novemcinctus
ENSPSIG00000004679PUF609998.279ENSDORG00000004585Puf609598.279Dipodomys_ordii
ENSPSIG00000004679PUF609548.797FBgn0028577hfp9947.237Drosophila_melanogaster
ENSPSIG00000004679PUF609669.841ENSEBUG00000005470-8869.583Eptatretus_burgeri
ENSPSIG00000004679PUF609961.046ENSEBUG00000014291puf60b8464.177Eptatretus_burgeri
ENSPSIG00000004679PUF609998.279ENSEASG00005009695PUF609898.276Equus_asinus_asinus
ENSPSIG00000004679PUF609998.279ENSECAG00000024681PUF609798.276Equus_caballus
ENSPSIG00000004679PUF609983.365ENSELUG00000006507puf60b9980.769Esox_lucius
ENSPSIG00000004679PUF609985.606ENSELUG00000018443-9885.417Esox_lucius
ENSPSIG00000004679PUF609997.897ENSFCAG00000001045PUF6010098.062Felis_catus
ENSPSIG00000004679PUF609985.824ENSFALG00000001136PUF609886.998Ficedula_albicollis
ENSPSIG00000004679PUF609998.470ENSFDAG00000017177PUF609398.470Fukomys_damarensis
ENSPSIG00000004679PUF609479.719ENSFHEG00000021687PUF6010080.573Fundulus_heteroclitus
ENSPSIG00000004679PUF609984.250ENSFHEG00000020046puf60b10085.988Fundulus_heteroclitus
ENSPSIG00000004679PUF609971.617ENSGMOG00000006392puf60b10070.677Gadus_morhua
ENSPSIG00000004679PUF606598.256ENSGALG00000039901PUF609498.256Gallus_gallus
ENSPSIG00000004679PUF609878.958ENSGAFG00000004334-9978.980Gambusia_affinis
ENSPSIG00000004679PUF609983.681ENSGAFG00000021040puf60b10085.221Gambusia_affinis
ENSPSIG00000004679PUF609870.793ENSGACG00000001484-10070.155Gasterosteus_aculeatus
ENSPSIG00000004679PUF609973.120ENSGACG00000004717puf60b9972.453Gasterosteus_aculeatus
ENSPSIG00000004679PUF609999.234ENSGAGG00000013289PUF609299.234Gopherus_agassizii
ENSPSIG00000004679PUF609997.897ENSGGOG00000004646PUF609897.893Gorilla_gorilla
ENSPSIG00000004679PUF609984.820ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSPSIG00000004679PUF609981.784ENSHBUG00000009634-9981.404Haplochromis_burtoni
ENSPSIG00000004679PUF609998.470ENSHGLG00000006111PUF609398.470Heterocephalus_glaber_female
ENSPSIG00000004679PUF609998.470ENSHGLG00100012362PUF609398.470Heterocephalus_glaber_male
ENSPSIG00000004679PUF609666.472ENSHCOG00000000378-9965.038Hippocampus_comes
ENSPSIG00000004679PUF609881.952ENSHCOG00000015541puf60b10082.320Hippocampus_comes
ENSPSIG00000004679PUF609882.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSPSIG00000004679PUF609878.383ENSIPUG00000004660puf60b9978.383Ictalurus_punctatus
ENSPSIG00000004679PUF609998.470ENSSTOG00000025037PUF609498.470Ictidomys_tridecemlineatus
ENSPSIG00000004679PUF609998.088ENSJJAG00000001076Puf609398.088Jaculus_jaculus
ENSPSIG00000004679PUF609884.837ENSKMAG00000016745puf60b10085.988Kryptolebias_marmoratus
ENSPSIG00000004679PUF609878.072ENSKMAG00000010106-10075.000Kryptolebias_marmoratus
ENSPSIG00000004679PUF609984.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSPSIG00000004679PUF606991.460ENSLACG00000005456PUF609991.460Latimeria_chalumnae
ENSPSIG00000004679PUF6010090.377ENSLOCG00000010106puf60b9989.905Lepisosteus_oculatus
ENSPSIG00000004679PUF609997.132ENSLAFG00000022929PUF609497.132Loxodonta_africana
ENSPSIG00000004679PUF609997.897ENSMFAG00000043373PUF609997.893Macaca_fascicularis
ENSPSIG00000004679PUF609997.897ENSMMUG00000013558PUF609897.893Macaca_mulatta
ENSPSIG00000004679PUF609997.897ENSMNEG00000031099PUF609897.893Macaca_nemestrina
ENSPSIG00000004679PUF609898.062ENSMLEG00000040009PUF6010098.062Mandrillus_leucophaeus
ENSPSIG00000004679PUF609982.353ENSMAMG00000019476-9981.973Mastacembelus_armatus
ENSPSIG00000004679PUF609985.389ENSMAMG00000010394puf60b10083.738Mastacembelus_armatus
ENSPSIG00000004679PUF609885.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSPSIG00000004679PUF609981.973ENSMZEG00005019425-9981.594Maylandia_zebra
ENSPSIG00000004679PUF609998.659ENSMGAG00000013070PUF609898.659Meleagris_gallopavo
ENSPSIG00000004679PUF607098.365ENSMAUG00000014267-9098.365Mesocricetus_auratus
ENSPSIG00000004679PUF609479.559ENSMAUG00000018549-9579.800Mesocricetus_auratus
ENSPSIG00000004679PUF609998.279ENSMICG00000012226PUF609998.276Microcebus_murinus
ENSPSIG00000004679PUF609997.897ENSMOCG00000018780Puf609497.897Microtus_ochrogaster
ENSPSIG00000004679PUF609885.797ENSMMOG00000004217puf60b10085.797Mola_mola
ENSPSIG00000004679PUF6010072.159ENSMMOG00000018059-9976.484Mola_mola
ENSPSIG00000004679PUF609997.897ENSMODG00000009161PUF609597.897Monodelphis_domestica
ENSPSIG00000004679PUF609977.778ENSMALG00000006797puf60b9977.778Monopterus_albus
ENSPSIG00000004679PUF609980.076ENSMALG00000000200-9978.868Monopterus_albus
ENSPSIG00000004679PUF609998.088MGP_CAROLIEiJ_G0019910Puf609398.088Mus_caroli
ENSPSIG00000004679PUF609998.088ENSMUSG00000002524Puf609398.088Mus_musculus
ENSPSIG00000004679PUF609998.088MGP_PahariEiJ_G0019920Puf609398.088Mus_pahari
ENSPSIG00000004679PUF609998.088MGP_SPRETEiJ_G0020812Puf609398.088Mus_spretus
ENSPSIG00000004679PUF609998.088ENSMPUG00000008137PUF609398.088Mustela_putorius_furo
ENSPSIG00000004679PUF609991.188ENSMLUG00000013032-9891.188Myotis_lucifugus
ENSPSIG00000004679PUF609997.514ENSMLUG00000000238-9497.514Myotis_lucifugus
ENSPSIG00000004679PUF609998.088ENSNGAG00000000712Puf6010098.256Nannospalax_galili
ENSPSIG00000004679PUF608084.471ENSNBRG00000013047puf60b9784.471Neolamprologus_brichardi
ENSPSIG00000004679PUF609982.129ENSNBRG00000017223-9982.129Neolamprologus_brichardi
ENSPSIG00000004679PUF609997.897ENSNLEG00000002156PUF609897.893Nomascus_leucogenys
ENSPSIG00000004679PUF607399.317ENSOPRG00000002147PUF607599.317Ochotona_princeps
ENSPSIG00000004679PUF607298.847ENSODEG00000014024-9098.847Octodon_degus
ENSPSIG00000004679PUF609673.176ENSODEG00000015513-9671.567Octodon_degus
ENSPSIG00000004679PUF6010084.398ENSONIG00000006247puf60b9984.398Oreochromis_niloticus
ENSPSIG00000004679PUF609982.075ENSONIG00000014030-9981.698Oreochromis_niloticus
ENSPSIG00000004679PUF609778.320ENSOANG00000006962PUF609978.516Ornithorhynchus_anatinus
ENSPSIG00000004679PUF609984.440ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSPSIG00000004679PUF609878.220ENSORLG00000028655-9978.517Oryzias_latipes
ENSPSIG00000004679PUF609984.440ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSPSIG00000004679PUF609978.113ENSORLG00020018144-9878.409Oryzias_latipes_hni
ENSPSIG00000004679PUF609984.121ENSORLG00015007718puf60b10084.704Oryzias_latipes_hsok
ENSPSIG00000004679PUF609878.368ENSORLG00015016833-9878.667Oryzias_latipes_hsok
ENSPSIG00000004679PUF609982.714ENSOMEG00000001643puf60b9983.232Oryzias_melastigma
ENSPSIG00000004679PUF609979.507ENSOMEG00000022185-9879.507Oryzias_melastigma
ENSPSIG00000004679PUF609998.470ENSOGAG00000006259PUF609498.470Otolemur_garnettii
ENSPSIG00000004679PUF609995.420ENSOARG00000016235PUF609995.420Ovis_aries
ENSPSIG00000004679PUF609997.897ENSPPAG00000029933PUF609897.893Pan_paniscus
ENSPSIG00000004679PUF609997.897ENSPPRG00000003257PUF6010098.062Panthera_pardus
ENSPSIG00000004679PUF609995.594ENSPTIG00000009795PUF609995.594Panthera_tigris_altaica
ENSPSIG00000004679PUF609997.706ENSPTRG00000020670PUF609897.701Pan_troglodytes
ENSPSIG00000004679PUF609997.706ENSPTRG00000043963-9897.701Pan_troglodytes
ENSPSIG00000004679PUF609997.897ENSPANG00000021936PUF609897.893Papio_anubis
ENSPSIG00000004679PUF609987.643ENSPKIG00000012204puf60b10088.077Paramormyrops_kingsleyae
ENSPSIG00000004679PUF609986.389ENSPKIG00000004295puf60a9992.353Paramormyrops_kingsleyae
ENSPSIG00000004679PUF609884.160ENSPMGG00000013444puf60b9984.160Periophthalmus_magnuspinnatus
ENSPSIG00000004679PUF609997.897ENSPEMG00000008820Puf609397.897Peromyscus_maniculatus_bairdii
ENSPSIG00000004679PUF609998.470ENSPCIG00000020270PUF609998.273Phascolarctos_cinereus
ENSPSIG00000004679PUF609984.250ENSPFOG00000019217puf60b9982.197Poecilia_formosa
ENSPSIG00000004679PUF609979.962ENSPFOG00000011118-9980.344Poecilia_formosa
ENSPSIG00000004679PUF609884.837ENSPLAG00000010754puf60b10085.988Poecilia_latipinna
ENSPSIG00000004679PUF609979.962ENSPLAG00000017025-9179.962Poecilia_latipinna
ENSPSIG00000004679PUF609984.250ENSPMEG00000000838puf60b10085.988Poecilia_mexicana
ENSPSIG00000004679PUF609980.153ENSPMEG00000009767-9180.534Poecilia_mexicana
ENSPSIG00000004679PUF609981.516ENSPREG00000005440puf60b9983.179Poecilia_reticulata
ENSPSIG00000004679PUF607996.643ENSPPYG00000018951-9596.643Pongo_abelii
ENSPSIG00000004679PUF607998.801ENSPCAG00000014837PUF6010098.801Procavia_capensis
ENSPSIG00000004679PUF609998.279ENSPCOG00000027981PUF609998.276Propithecus_coquereli
ENSPSIG00000004679PUF609899.367ENSPVAG00000016167PUF608199.367Pteropus_vampyrus
ENSPSIG00000004679PUF609885.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSPSIG00000004679PUF609981.973ENSPNYG00000004273-9981.594Pundamilia_nyererei
ENSPSIG00000004679PUF609976.952ENSPNAG00000019415puf60b9074.905Pygocentrus_nattereri
ENSPSIG00000004679PUF609982.765ENSPNAG00000019909puf60a9982.420Pygocentrus_nattereri
ENSPSIG00000004679PUF609998.088ENSRNOG00000009960Puf609398.088Rattus_norvegicus
ENSPSIG00000004679PUF609997.897ENSRBIG00000035274PUF609897.893Rhinopithecus_bieti
ENSPSIG00000004679PUF609997.897ENSRROG00000029360PUF609997.893Rhinopithecus_roxellana
ENSPSIG00000004679PUF6010096.015ENSSBOG00000027089PUF609896.743Saimiri_boliviensis_boliviensis
ENSPSIG00000004679PUF608997.877ENSSHAG00000006668PUF609097.877Sarcophilus_harrisii
ENSPSIG00000004679PUF609882.667ENSSFOG00015019619puf60b9986.032Scleropages_formosus
ENSPSIG00000004679PUF609981.884ENSSFOG00015019371puf60a9887.525Scleropages_formosus
ENSPSIG00000004679PUF607292.580ENSSMAG00000016381puf60b7392.580Scophthalmus_maximus
ENSPSIG00000004679PUF609681.605ENSSDUG00000007048-9681.996Seriola_dumerili
ENSPSIG00000004679PUF609983.829ENSSDUG00000009935puf60b9984.646Seriola_dumerili
ENSPSIG00000004679PUF609885.878ENSSLDG00000024011puf60b10083.925Seriola_lalandi_dorsalis
ENSPSIG00000004679PUF609880.266ENSSLDG00000007366-9980.455Seriola_lalandi_dorsalis
ENSPSIG00000004679PUF606486.726ENSSPUG00000013518PUF609485.549Sphenodon_punctatus
ENSPSIG00000004679PUF609982.810ENSSPAG00000012144puf60b10084.112Stegastes_partitus
ENSPSIG00000004679PUF609881.679ENSSPAG00000020285-10082.252Stegastes_partitus
ENSPSIG00000004679PUF609997.706ENSSSCG00000038800PUF6010092.964Sus_scrofa
ENSPSIG00000004679PUF609995.019ENSTGUG00000012797-10095.019Taeniopygia_guttata
ENSPSIG00000004679PUF609984.310ENSTRUG00000005420puf60b10082.617Takifugu_rubripes
ENSPSIG00000004679PUF609877.907ENSTRUG00000008843-10077.519Takifugu_rubripes
ENSPSIG00000004679PUF609984.280ENSTNIG00000013675puf60b10084.280Tetraodon_nigroviridis
ENSPSIG00000004679PUF609977.820ENSTNIG00000003069-10078.203Tetraodon_nigroviridis
ENSPSIG00000004679PUF606196.284ENSTBEG00000002751-9996.284Tupaia_belangeri
ENSPSIG00000004679PUF607580.058ENSTBEG00000001899-10081.214Tupaia_belangeri
ENSPSIG00000004679PUF609897.674ENSTTRG00000017088PUF6010097.674Tursiops_truncatus
ENSPSIG00000004679PUF609998.279ENSUAMG00000024917PUF609898.276Ursus_americanus
ENSPSIG00000004679PUF609993.117ENSUMAG00000000272PUF609492.925Ursus_maritimus
ENSPSIG00000004679PUF609998.279ENSVVUG00000022527PUF6010098.450Vulpes_vulpes
ENSPSIG00000004679PUF609994.434ENSXETG00000012469puf609894.615Xenopus_tropicalis
ENSPSIG00000004679PUF609881.574ENSXCOG00000012355puf60b10082.726Xiphophorus_couchianus
ENSPSIG00000004679PUF609977.567ENSXMAG00000010507-9977.143Xiphophorus_maculatus
ENSPSIG00000004679PUF609984.250ENSXMAG00000001862puf60b10085.988Xiphophorus_maculatus

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