EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000004948 (Gene tree)
Gene ID: -
Gene Symbol: TDP2
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 8950 bases
Position: chrJH211933.1:682681-691630
Accession: 102455428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000005313	Exo_endo_phos	PF03372.23	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000005344	TDP2-201	1467	XM_006134022	ENSPSIP00000005313	289 (aa)	XP_006134084	K7FBA3

Gene Model

Click here to download ENSPSIG00000004948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000004948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000004948	TDP2	100	69.966	ENSG00000111802	TDP2	92	71.326	Homo_sapiens
ENSPSIG00000004948	TDP2	87	54.331	ENSAPOG00000018379	-	89	54.331	Acanthochromis_polyacanthus
ENSPSIG00000004948	TDP2	96	72.043	ENSAMEG00000010230	TDP2	99	72.043	Ailuropoda_melanoleuca
ENSPSIG00000004948	TDP2	56	59.756	ENSAOCG00000010081	-	72	59.756	Amphiprion_ocellaris
ENSPSIG00000004948	TDP2	88	55.078	ENSAPEG00000004208	-	91	55.078	Amphiprion_percula
ENSPSIG00000004948	TDP2	92	52.143	ENSATEG00000010663	-	91	52.143	Anabas_testudineus
ENSPSIG00000004948	TDP2	99	70.383	ENSACAG00000002332	TDP2	78	70.383	Anolis_carolinensis
ENSPSIG00000004948	TDP2	100	69.521	ENSANAG00000020033	TDP2	81	69.521	Aotus_nancymaae
ENSPSIG00000004948	TDP2	94	50.725	ENSACLG00000016132	tdp2b	93	50.725	Astatotilapia_calliptera
ENSPSIG00000004948	TDP2	87	56.917	ENSACLG00000016148	tdp2b	90	56.917	Astatotilapia_calliptera
ENSPSIG00000004948	TDP2	94	50.725	ENSACLG00000016174	tdp2b	93	50.725	Astatotilapia_calliptera
ENSPSIG00000004948	TDP2	94	55.636	ENSAMXG00000011775	tdp2b	72	55.636	Astyanax_mexicanus
ENSPSIG00000004948	TDP2	94	50.365	ENSAMXG00000036549	tdp2a	89	50.365	Astyanax_mexicanus
ENSPSIG00000004948	TDP2	94	71.429	ENSBTAG00000000365	TDP2	75	71.429	Bos_taurus
ENSPSIG00000004948	TDP2	84	32.932	WBGene00013405	tdpt-1	73	32.353	Caenorhabditis_elegans
ENSPSIG00000004948	TDP2	100	69.178	ENSCJAG00000006074	TDP2	92	70.968	Callithrix_jacchus
ENSPSIG00000004948	TDP2	100	68.151	ENSCJAG00000021963	-	81	68.151	Callithrix_jacchus
ENSPSIG00000004948	TDP2	96	73.118	ENSCAFG00000010428	TDP2	96	73.118	Canis_familiaris
ENSPSIG00000004948	TDP2	96	73.118	ENSCAFG00020009994	TDP2	96	73.118	Canis_lupus_dingo
ENSPSIG00000004948	TDP2	97	70.423	ENSCHIG00000015294	-	92	72.161	Capra_hircus
ENSPSIG00000004948	TDP2	99	68.493	ENSTSYG00000037199	TDP2	94	68.836	Carlito_syrichta
ENSPSIG00000004948	TDP2	96	73.022	ENSCPOG00000006390	TDP2	78	73.022	Cavia_porcellus
ENSPSIG00000004948	TDP2	100	70.548	ENSCCAG00000022734	TDP2	92	72.401	Cebus_capucinus
ENSPSIG00000004948	TDP2	100	69.966	ENSCATG00000022076	TDP2	94	69.686	Cercocebus_atys
ENSPSIG00000004948	TDP2	96	73.381	ENSCLAG00000002072	TDP2	78	73.381	Chinchilla_lanigera
ENSPSIG00000004948	TDP2	100	69.966	ENSCSAG00000007769	TDP2	82	69.966	Chlorocebus_sabaeus
ENSPSIG00000004948	TDP2	96	89.493	ENSCPBG00000006551	TDP2	71	89.493	Chrysemys_picta_bellii
ENSPSIG00000004948	TDP2	100	69.178	ENSCANG00000040122	TDP2	95	69.338	Colobus_angolensis_palliatus
ENSPSIG00000004948	TDP2	88	67.323	ENSCGRG00001000384	Tdp2	68	67.323	Cricetulus_griseus_chok1gshd
ENSPSIG00000004948	TDP2	88	67.323	ENSCGRG00000010250	Tdp2	72	67.323	Cricetulus_griseus_crigri
ENSPSIG00000004948	TDP2	92	57.621	ENSCVAG00000003114	tdp2b	74	57.621	Cyprinodon_variegatus
ENSPSIG00000004948	TDP2	92	48.679	ENSDARG00000069941	tdp2a	59	48.679	Danio_rerio
ENSPSIG00000004948	TDP2	95	55.872	ENSDARG00000035954	tdp2b	73	55.872	Danio_rerio
ENSPSIG00000004948	TDP2	99	70.280	ENSDNOG00000044082	TDP2	77	70.280	Dasypus_novemcinctus
ENSPSIG00000004948	TDP2	96	70.863	ENSETEG00000019096	TDP2	100	70.863	Echinops_telfairi
ENSPSIG00000004948	TDP2	87	51.181	ENSEBUG00000006535	tdp2a	59	51.181	Eptatretus_burgeri
ENSPSIG00000004948	TDP2	96	72.302	ENSEASG00005007656	TDP2	77	72.302	Equus_asinus_asinus
ENSPSIG00000004948	TDP2	96	71.942	ENSECAG00000014264	TDP2	77	71.942	Equus_caballus
ENSPSIG00000004948	TDP2	96	70.652	ENSEEUG00000010776	TDP2	76	70.652	Erinaceus_europaeus
ENSPSIG00000004948	TDP2	92	49.811	ENSELUG00000009321	tdp2a	82	49.811	Esox_lucius
ENSPSIG00000004948	TDP2	94	56.098	ENSELUG00000016449	tdp2b	76	56.098	Esox_lucius
ENSPSIG00000004948	TDP2	100	69.521	ENSFCAG00000025612	TDP2	81	69.521	Felis_catus
ENSPSIG00000004948	TDP2	96	69.928	ENSFALG00000004710	TDP2	77	69.928	Ficedula_albicollis
ENSPSIG00000004948	TDP2	96	72.043	ENSFDAG00000006512	TDP2	96	72.043	Fukomys_damarensis
ENSPSIG00000004948	TDP2	86	53.175	ENSFHEG00000013560	-	86	53.175	Fundulus_heteroclitus
ENSPSIG00000004948	TDP2	96	74.638	ENSGALG00000013637	TDP2	75	74.638	Gallus_gallus
ENSPSIG00000004948	TDP2	96	89.855	ENSGAGG00000002853	TDP2	71	89.855	Gopherus_agassizii
ENSPSIG00000004948	TDP2	100	69.625	ENSGGOG00000014237	TDP2	94	69.338	Gorilla_gorilla
ENSPSIG00000004948	TDP2	72	56.132	ENSHBUG00000005421	-	82	58.883	Haplochromis_burtoni
ENSPSIG00000004948	TDP2	94	58.394	ENSHBUG00000002714	tdp2b	74	58.394	Haplochromis_burtoni
ENSPSIG00000004948	TDP2	96	72.826	ENSHGLG00000008655	TDP2	77	72.826	Heterocephalus_glaber_female
ENSPSIG00000004948	TDP2	96	72.826	ENSHGLG00100019087	TDP2	77	72.826	Heterocephalus_glaber_male
ENSPSIG00000004948	TDP2	94	57.721	ENSIPUG00000013691	tdp2b	72	57.721	Ictalurus_punctatus
ENSPSIG00000004948	TDP2	96	63.768	ENSJJAG00000021685	Tdp2	79	63.768	Jaculus_jaculus
ENSPSIG00000004948	TDP2	89	53.077	ENSKMAG00000015485	-	83	53.077	Kryptolebias_marmoratus
ENSPSIG00000004948	TDP2	96	66.547	ENSLACG00000008852	TDP2	76	66.547	Latimeria_chalumnae
ENSPSIG00000004948	TDP2	95	61.314	ENSLOCG00000005817	tdp2b	98	61.314	Lepisosteus_oculatus
ENSPSIG00000004948	TDP2	100	69.521	ENSLAFG00000002567	TDP2	83	69.521	Loxodonta_africana
ENSPSIG00000004948	TDP2	100	70.307	ENSMFAG00000045296	TDP2	92	71.685	Macaca_fascicularis
ENSPSIG00000004948	TDP2	100	70.307	ENSMMUG00000009803	TDP2	82	70.307	Macaca_mulatta
ENSPSIG00000004948	TDP2	100	70.307	ENSMNEG00000038003	TDP2	92	71.685	Macaca_nemestrina
ENSPSIG00000004948	TDP2	100	69.521	ENSMLEG00000028883	TDP2	94	69.686	Mandrillus_leucophaeus
ENSPSIG00000004948	TDP2	97	55.477	ENSMAMG00000013654	tdp2b	78	55.477	Mastacembelus_armatus
ENSPSIG00000004948	TDP2	87	56.917	ENSMZEG00005004077	tdp2b	86	56.917	Maylandia_zebra
ENSPSIG00000004948	TDP2	83	51.037	ENSMZEG00005003980	-	78	51.037	Maylandia_zebra
ENSPSIG00000004948	TDP2	87	50.593	ENSMZEG00005004103	tdp2b	84	50.593	Maylandia_zebra
ENSPSIG00000004948	TDP2	92	53.333	ENSMZEG00005004153	tdp2b	95	53.333	Maylandia_zebra
ENSPSIG00000004948	TDP2	85	53.441	ENSMZEG00005004055	tdp2b	82	53.441	Maylandia_zebra
ENSPSIG00000004948	TDP2	94	56.934	ENSMZEG00005003950	tdp2b	74	56.934	Maylandia_zebra
ENSPSIG00000004948	TDP2	94	50.730	ENSMZEG00005004126	tdp2b	93	50.730	Maylandia_zebra
ENSPSIG00000004948	TDP2	96	73.551	ENSMGAG00000008014	TDP2	75	73.551	Meleagris_gallopavo
ENSPSIG00000004948	TDP2	96	63.177	ENSMAUG00000014451	Tdp2	75	63.177	Mesocricetus_auratus
ENSPSIG00000004948	TDP2	100	69.863	ENSMICG00000000039	TDP2	94	71.942	Microcebus_murinus
ENSPSIG00000004948	TDP2	99	61.938	ENSMOCG00000002823	Tdp2	78	61.938	Microtus_ochrogaster
ENSPSIG00000004948	TDP2	84	67.623	ENSMODG00000011653	TDP2	73	68.333	Monodelphis_domestica
ENSPSIG00000004948	TDP2	94	53.623	ENSMALG00000005368	-	90	53.623	Monopterus_albus
ENSPSIG00000004948	TDP2	99	62.284	MGP_CAROLIEiJ_G0018354	Tdp2	78	62.284	Mus_caroli
ENSPSIG00000004948	TDP2	99	62.976	ENSMUSG00000035958	Tdp2	78	62.373	Mus_musculus
ENSPSIG00000004948	TDP2	88	67.717	MGP_PahariEiJ_G0019417	Tdp2	68	67.717	Mus_pahari
ENSPSIG00000004948	TDP2	99	62.759	MGP_SPRETEiJ_G0019220	Tdp2	77	62.759	Mus_spretus
ENSPSIG00000004948	TDP2	96	71.685	ENSMPUG00000004516	TDP2	78	71.685	Mustela_putorius_furo
ENSPSIG00000004948	TDP2	96	68.459	ENSMLUG00000013506	TDP2	81	66.212	Myotis_lucifugus
ENSPSIG00000004948	TDP2	85	66.397	ENSNGAG00000001375	Tdp2	67	66.397	Nannospalax_galili
ENSPSIG00000004948	TDP2	100	69.625	ENSNLEG00000002447	TDP2	91	69.338	Nomascus_leucogenys
ENSPSIG00000004948	TDP2	96	70.504	ENSOPRG00000016299	TDP2	80	70.504	Ochotona_princeps
ENSPSIG00000004948	TDP2	96	72.760	ENSODEG00000014018	TDP2	95	72.760	Octodon_degus
ENSPSIG00000004948	TDP2	100	67.698	ENSOCUG00000013773	TDP2	81	67.698	Oryctolagus_cuniculus
ENSPSIG00000004948	TDP2	91	49.627	ENSORLG00000001661	-	98	49.627	Oryzias_latipes
ENSPSIG00000004948	TDP2	93	48.897	ENSORLG00020004634	-	98	49.627	Oryzias_latipes_hni
ENSPSIG00000004948	TDP2	90	44.815	ENSORLG00015008190	-	98	44.815	Oryzias_latipes_hsok
ENSPSIG00000004948	TDP2	93	50.000	ENSOMEG00000015899	-	95	50.195	Oryzias_melastigma
ENSPSIG00000004948	TDP2	100	68.942	ENSOGAG00000025303	TDP2	80	68.942	Otolemur_garnettii
ENSPSIG00000004948	TDP2	100	70.307	ENSPPAG00000029023	TDP2	95	70.035	Pan_paniscus
ENSPSIG00000004948	TDP2	100	68.836	ENSPPRG00000015398	TDP2	81	68.836	Panthera_pardus
ENSPSIG00000004948	TDP2	96	71.223	ENSPTIG00000018574	TDP2	95	71.223	Panthera_tigris_altaica
ENSPSIG00000004948	TDP2	100	70.307	ENSPTRG00000017778	TDP2	94	70.035	Pan_troglodytes
ENSPSIG00000004948	TDP2	100	68.151	ENSPANG00000017590	TDP2	94	69.686	Papio_anubis
ENSPSIG00000004948	TDP2	94	57.818	ENSPKIG00000006483	tdp2b	75	57.818	Paramormyrops_kingsleyae
ENSPSIG00000004948	TDP2	99	62.630	ENSPEMG00000001788	Tdp2	78	62.630	Peromyscus_maniculatus_bairdii
ENSPSIG00000004948	TDP2	87	46.816	ENSPMAG00000001570	tdp2b	97	47.191	Petromyzon_marinus
ENSPSIG00000004948	TDP2	99	67.018	ENSPCIG00000007316	TDP2	74	67.018	Phascolarctos_cinereus
ENSPSIG00000004948	TDP2	87	53.360	ENSPFOG00000017990	-	91	53.360	Poecilia_formosa
ENSPSIG00000004948	TDP2	87	52.964	ENSPLAG00000019439	-	80	52.964	Poecilia_latipinna
ENSPSIG00000004948	TDP2	87	53.755	ENSPMEG00000010824	-	85	53.755	Poecilia_mexicana
ENSPSIG00000004948	TDP2	100	68.601	ENSPPYG00000016282	TDP2	74	68.601	Pongo_abelii
ENSPSIG00000004948	TDP2	100	71.233	ENSPCOG00000021415	TDP2	98	73.381	Propithecus_coquereli
ENSPSIG00000004948	TDP2	94	57.664	ENSPNYG00000011532	tdp2b	74	57.664	Pundamilia_nyererei
ENSPSIG00000004948	TDP2	92	48.951	ENSPNYG00000011504	tdp2b	93	48.951	Pundamilia_nyererei
ENSPSIG00000004948	TDP2	56	55.828	ENSPNYG00000001944	-	68	55.828	Pundamilia_nyererei
ENSPSIG00000004948	TDP2	87	54.365	ENSPNAG00000022162	tdp2a	63	55.285	Pygocentrus_nattereri
ENSPSIG00000004948	TDP2	88	68.898	ENSRNOG00000018246	Tdp2	69	68.898	Rattus_norvegicus
ENSPSIG00000004948	TDP2	100	69.625	ENSRBIG00000037119	TDP2	92	70.968	Rhinopithecus_bieti
ENSPSIG00000004948	TDP2	100	69.283	ENSRROG00000005025	TDP2	92	70.609	Rhinopithecus_roxellana
ENSPSIG00000004948	TDP2	100	70.205	ENSSBOG00000028734	TDP2	91	72.662	Saimiri_boliviensis_boliviensis
ENSPSIG00000004948	TDP2	96	69.424	ENSSHAG00000002506	TDP2	74	69.424	Sarcophilus_harrisii
ENSPSIG00000004948	TDP2	88	52.362	ENSSFOG00015011322	-	71	52.362	Scleropages_formosus
ENSPSIG00000004948	TDP2	96	67.742	ENSSARG00000013547	TDP2	100	67.742	Sorex_araneus
ENSPSIG00000004948	TDP2	100	67.110	ENSSPUG00000008288	TDP2	82	67.110	Sphenodon_punctatus
ENSPSIG00000004948	TDP2	100	69.863	ENSSSCG00000001092	TDP2	81	69.863	Sus_scrofa
ENSPSIG00000004948	TDP2	90	73.359	ENSTGUG00000009035	TDP2	99	73.359	Taeniopygia_guttata
ENSPSIG00000004948	TDP2	88	53.612	ENSTRUG00000012218	-	91	53.612	Takifugu_rubripes
ENSPSIG00000004948	TDP2	95	58.333	ENSTRUG00000014347	tdp2b	75	58.333	Takifugu_rubripes
ENSPSIG00000004948	TDP2	96	58.273	ENSTNIG00000017792	tdp2b	75	58.273	Tetraodon_nigroviridis
ENSPSIG00000004948	TDP2	87	53.906	ENSTNIG00000010260	TDP2	97	53.906	Tetraodon_nigroviridis
ENSPSIG00000004948	TDP2	89	75.875	ENSTTRG00000016376	TDP2	77	71.942	Tursiops_truncatus
ENSPSIG00000004948	TDP2	96	71.685	ENSUAMG00000025939	TDP2	80	71.685	Ursus_americanus
ENSPSIG00000004948	TDP2	96	71.685	ENSUMAG00000020111	TDP2	93	71.685	Ursus_maritimus
ENSPSIG00000004948	TDP2	96	68.214	ENSXETG00000014826	tdp2	75	68.214	Xenopus_tropicalis
ENSPSIG00000004948	TDP2	87	53.543	ENSXCOG00000010778	-	70	53.543	Xiphophorus_couchianus
ENSPSIG00000004948	TDP2	87	53.937	ENSXMAG00000022252	-	73	53.937	Xiphophorus_maculatus