EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000005027 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 29251 bases
Position: chrJH212182.1:369281-398531
Accession: 102460633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000005432	RRM_1	PF00076.22	8.3e-07	1	1
ENSPSIP00000005448	RRM_1	PF00076.22	8.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000005480	-	6339	-	ENSPSIP00000005448	1738 (aa)	-	K7FBN8
ENSPSIT00000005464	-	5967	XM_006134364	ENSPSIP00000005432	1614 (aa)	-	K7FBM2

Gene Model

Click here to download ENSPSIG00000005027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000005027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000005027	-	73	82.692	ENSAMEG00000007540	-	67	82.132	Ailuropoda_melanoleuca
ENSPSIG00000005027	-	76	86.228	ENSACAG00000007606	-	67	85.757	Anolis_carolinensis
ENSPSIG00000005027	-	50	79.257	ENSANAG00000021698	-	76	72.802	Aotus_nancymaae
ENSPSIG00000005027	-	76	72.304	ENSCAPG00000006491	-	76	74.611	Cavia_aperea
ENSPSIG00000005027	-	74	93.460	ENSCPBG00000010830	-	81	93.188	Chrysemys_picta_bellii
ENSPSIG00000005027	-	56	59.457	ENSDNOG00000025514	-	94	58.529	Dasypus_novemcinctus
ENSPSIG00000005027	-	80	95.770	ENSGAGG00000010781	-	76	96.764	Gopherus_agassizii
ENSPSIG00000005027	-	76	80.997	ENSHGLG00000014238	-	81	72.656	Heterocephalus_glaber_female
ENSPSIG00000005027	-	72	87.160	ENSHGLG00100010551	-	75	88.189	Heterocephalus_glaber_male
ENSPSIG00000005027	-	64	78.188	ENSHCOG00000003119	setd1a	51	76.923	Hippocampus_comes
ENSPSIG00000005027	-	50	80.000	ENSMNEG00000032572	-	78	70.361	Macaca_nemestrina
ENSPSIG00000005027	-	63	72.727	ENSMAMG00000021851	setd1a	70	72.524	Mastacembelus_armatus
ENSPSIG00000005027	-	74	83.692	ENSMAUG00000008959	-	79	74.227	Mesocricetus_auratus
ENSPSIG00000005027	-	57	80.000	ENSMMOG00000016992	setd1a	59	76.677	Mola_mola
ENSPSIG00000005027	-	56	57.905	ENSMODG00000001726	-	58	57.071	Monodelphis_domestica
ENSPSIG00000005027	-	73	83.540	MGP_CAROLIEiJ_G0030519	-	100	79.188	Mus_caroli
ENSPSIG00000005027	-	56	57.723	ENSMUSG00000042308	Setd1a	100	79.188	Mus_musculus
ENSPSIG00000005027	-	57	81.308	MGP_SPRETEiJ_G0031633	Setd1a	100	78.680	Mus_spretus
ENSPSIG00000005027	-	71	86.942	ENSMPUG00000011867	-	65	84.314	Mustela_putorius_furo
ENSPSIG00000005027	-	79	68.765	ENSMLUG00000027303	-	74	71.795	Myotis_lucifugus
ENSPSIG00000005027	-	53	80.667	ENSOMEG00000019732	setd1a	50	77.316	Oryzias_melastigma
ENSPSIG00000005027	-	74	86.242	ENSOARG00000008207	-	73	85.574	Ovis_aries
ENSPSIG00000005027	-	71	86.348	ENSPPAG00000030470	-	85	86.689	Pan_paniscus
ENSPSIG00000005027	-	72	86.792	ENSPTIG00000010871	-	76	86.567	Panthera_tigris_altaica
ENSPSIG00000005027	-	75	80.967	ENSPCIG00000016725	-	78	73.779	Phascolarctos_cinereus
ENSPSIG00000005027	-	68	78.302	ENSPFOG00000013669	setd1a	50	77.287	Poecilia_formosa
ENSPSIG00000005027	-	68	78.302	ENSPLAG00000009294	setd1a	50	77.955	Poecilia_latipinna
ENSPSIG00000005027	-	58	78.302	ENSPMEG00000005864	setd1a	50	77.955	Poecilia_mexicana
ENSPSIG00000005027	-	62	94.175	ENSPPYG00000007296	-	68	94.175	Pongo_abelii
ENSPSIG00000005027	-	63	87.817	ENSPCAG00000014351	-	68	87.817	Procavia_capensis
ENSPSIG00000005027	-	51	76.636	ENSPVAG00000011049	-	65	78.646	Pteropus_vampyrus
ENSPSIG00000005027	-	71	86.348	ENSRROG00000040062	-	87	86.689	Rhinopithecus_roxellana
ENSPSIG00000005027	-	75	84.923	ENSSHAG00000010784	-	79	75.457	Sarcophilus_harrisii
ENSPSIG00000005027	-	68	64.516	ENSSARG00000005591	-	79	64.875	Sorex_araneus
ENSPSIG00000005027	-	57	94.175	ENSTBEG00000009714	-	59	94.175	Tupaia_belangeri
ENSPSIG00000005027	-	57	90.756	ENSUMAG00000013935	-	67	90.756	Ursus_maritimus
ENSPSIG00000005027	-	67	79.817	ENSVVUG00000027687	-	52	59.813	Vulpes_vulpes