EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000005234 (Gene tree)
Gene ID: 102460009
Gene Symbol: LSM11
Alias: -
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 8365 bases
Position: chrJH224652.1:6708511-6716875
Accession: 102460009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000005625	LSM	PF01423.22	4.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000005658	LSM11-201	5053	XM_006138317	ENSPSIP00000005625	209 (aa)	XP_006138379	K7FC65

Gene Model

Click here to download ENSPSIG00000005234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000005234's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000005234	LSM11	99	59.447	ENSCAPG00000009739	LSM11	100	62.212	Cavia_aperea
ENSPSIG00000005234	LSM11	100	59.174	ENSCPOG00000000906	LSM11	99	61.927	Cavia_porcellus
ENSPSIG00000005234	LSM11	100	61.468	ENSCLAG00000017067	LSM11	91	61.468	Chinchilla_lanigera
ENSPSIG00000005234	LSM11	99	59.259	ENSCHOG00000010946	LSM11	99	62.500	Choloepus_hoffmanni
ENSPSIG00000005234	LSM11	99	61.751	ENSCANG00000040781	LSM11	100	61.751	Colobus_angolensis_palliatus
ENSPSIG00000005234	LSM11	100	61.927	ENSCGRG00000000197	Lsm11	95	61.927	Cricetulus_griseus_crigri
ENSPSIG00000005234	LSM11	97	40.488	ENSCSEG00000019951	lsm11	50	40.488	Cynoglossus_semilaevis
ENSPSIG00000005234	LSM11	99	59.908	ENSEEUG00000010814	LSM11	100	59.908	Erinaceus_europaeus
ENSPSIG00000005234	LSM11	99	61.751	ENSMLEG00000027420	LSM11	100	61.751	Mandrillus_leucophaeus
ENSPSIG00000005234	LSM11	100	60.000	ENSMLUG00000015930	LSM11	96	60.000	Myotis_lucifugus
ENSPSIG00000005234	LSM11	100	62.385	ENSOGAG00000009059	LSM11	100	62.385	Otolemur_garnettii
ENSPSIG00000005234	LSM11	98	43.137	ENSPLAG00000019434	lsm11	50	43.137	Poecilia_latipinna
ENSPSIG00000005234	LSM11	100	59.633	ENSPCAG00000016360	LSM11	99	62.385	Procavia_capensis
ENSPSIG00000005234	LSM11	99	62.212	ENSTBEG00000000992	LSM11	100	62.212	Tupaia_belangeri
ENSPSIG00000005234	LSM11	98	42.647	ENSXMAG00000008238	lsm11	50	42.647	Xiphophorus_maculatus