EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000005318 (Gene tree)
Gene ID: 102448337
Gene Symbol: TNRC6B
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 173564 bases
Position: chrJH209111.1:573462-747025
Accession: 102448337
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000005719	Ago_hook	PF10427.9	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000005752	TNRC6B-201	7490	XM_006123939	ENSPSIP00000005719	1768 (aa)	XP_006124001	K7FCF9

Gene Model

Click here to download ENSPSIG00000005318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000005318's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000005318	TNRC6B	89	35.760	ENSPSIG00000018069	TNRC6C	99	35.092
ENSPSIG00000005318	TNRC6B	73	37.958	ENSPSIG00000003965	TNRC6A	90	37.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000005318	TNRC6B	99	85.691	ENSG00000100354	TNRC6B	99	88.126	Homo_sapiens
ENSPSIG00000005318	TNRC6B	99	85.199	ENSAMEG00000011025	TNRC6B	99	84.653	Ailuropoda_melanoleuca
ENSPSIG00000005318	TNRC6B	98	88.208	ENSAPLG00000009347	TNRC6B	100	88.037	Anas_platyrhynchos
ENSPSIG00000005318	TNRC6B	99	76.906	ENSACAG00000007281	TNRC6B	99	76.437	Anolis_carolinensis
ENSPSIG00000005318	TNRC6B	99	87.402	ENSANAG00000035042	TNRC6B	98	88.895	Aotus_nancymaae
ENSPSIG00000005318	TNRC6B	100	87.144	ENSBTAG00000021076	TNRC6B	99	87.514	Bos_taurus
ENSPSIG00000005318	TNRC6B	98	88.043	ENSCJAG00000002732	TNRC6B	99	95.775	Callithrix_jacchus
ENSPSIG00000005318	TNRC6B	96	88.201	ENSCAFG00000001255	TNRC6B	99	85.827	Canis_familiaris
ENSPSIG00000005318	TNRC6B	99	87.739	ENSCAFG00020002189	TNRC6B	98	88.076	Canis_lupus_dingo
ENSPSIG00000005318	TNRC6B	99	87.233	ENSCHIG00000003491	TNRC6B	99	87.739	Capra_hircus
ENSPSIG00000005318	TNRC6B	99	87.436	ENSTSYG00000011836	TNRC6B	99	87.763	Carlito_syrichta
ENSPSIG00000005318	TNRC6B	99	87.690	ENSCPOG00000005705	TNRC6B	99	87.634	Cavia_porcellus
ENSPSIG00000005318	TNRC6B	98	87.364	ENSCCAG00000019912	TNRC6B	98	87.650	Cebus_capucinus
ENSPSIG00000005318	TNRC6B	98	88.717	ENSCATG00000029291	TNRC6B	99	88.660	Cercocebus_atys
ENSPSIG00000005318	TNRC6B	99	87.451	ENSCLAG00000016942	TNRC6B	97	87.845	Chinchilla_lanigera
ENSPSIG00000005318	TNRC6B	99	85.110	ENSCSAG00000006021	TNRC6B	99	85.054	Chlorocebus_sabaeus
ENSPSIG00000005318	TNRC6B	92	93.616	ENSCPBG00000022932	TNRC6B	100	93.616	Chrysemys_picta_bellii
ENSPSIG00000005318	TNRC6B	98	88.717	ENSCANG00000030776	TNRC6B	99	88.571	Colobus_angolensis_palliatus
ENSPSIG00000005318	TNRC6B	96	86.542	ENSCGRG00001020166	Tnrc6b	97	86.542	Cricetulus_griseus_chok1gshd
ENSPSIG00000005318	TNRC6B	99	86.599	ENSCGRG00000016696	Tnrc6b	99	86.599	Cricetulus_griseus_crigri
ENSPSIG00000005318	TNRC6B	100	87.962	ENSDNOG00000012744	TNRC6B	99	88.394	Dasypus_novemcinctus
ENSPSIG00000005318	TNRC6B	99	87.655	ENSDORG00000003386	Tnrc6b	97	87.824	Dipodomys_ordii
ENSPSIG00000005318	TNRC6B	99	77.565	ENSETEG00000006570	TNRC6B	99	78.354	Echinops_telfairi
ENSPSIG00000005318	TNRC6B	99	88.014	ENSEASG00005005306	TNRC6B	99	88.409	Equus_asinus_asinus
ENSPSIG00000005318	TNRC6B	95	94.500	ENSECAG00000009759	TNRC6B	99	94.500	Equus_caballus
ENSPSIG00000005318	TNRC6B	56	92.674	ENSEEUG00000008690	-	60	92.674	Erinaceus_europaeus
ENSPSIG00000005318	TNRC6B	99	88.153	ENSFCAG00000004791	TNRC6B	97	88.490	Felis_catus
ENSPSIG00000005318	TNRC6B	95	92.130	ENSFALG00000012195	TNRC6B	100	91.834	Ficedula_albicollis
ENSPSIG00000005318	TNRC6B	99	87.950	ENSFDAG00000021368	TNRC6B	97	88.288	Fukomys_damarensis
ENSPSIG00000005318	TNRC6B	99	92.513	ENSGALG00000012050	TNRC6B	97	92.343	Gallus_gallus
ENSPSIG00000005318	TNRC6B	99	95.398	ENSGAGG00000025188	TNRC6B	98	95.341	Gopherus_agassizii
ENSPSIG00000005318	TNRC6B	99	88.309	ENSGGOG00000008444	TNRC6B	98	88.895	Gorilla_gorilla
ENSPSIG00000005318	TNRC6B	99	87.535	ENSHGLG00000009306	TNRC6B	97	87.479	Heterocephalus_glaber_female
ENSPSIG00000005318	TNRC6B	99	87.930	ENSHGLG00100018108	TNRC6B	98	87.535	Heterocephalus_glaber_male
ENSPSIG00000005318	TNRC6B	78	44.647	ENSIPUG00000001515	tnrc6b	94	45.690	Ictalurus_punctatus
ENSPSIG00000005318	TNRC6B	99	87.542	ENSSTOG00000008927	TNRC6B	97	87.824	Ictidomys_tridecemlineatus
ENSPSIG00000005318	TNRC6B	99	87.028	ENSJJAG00000015779	Tnrc6b	97	86.858	Jaculus_jaculus
ENSPSIG00000005318	TNRC6B	99	62.603	ENSLACG00000000628	-	99	61.957	Latimeria_chalumnae
ENSPSIG00000005318	TNRC6B	77	87.980	ENSLAFG00000014473	TNRC6B	100	88.712	Loxodonta_africana
ENSPSIG00000005318	TNRC6B	98	88.774	ENSMFAG00000003862	TNRC6B	99	88.717	Macaca_fascicularis
ENSPSIG00000005318	TNRC6B	99	88.832	ENSMMUG00000021345	TNRC6B	97	88.511	Macaca_mulatta
ENSPSIG00000005318	TNRC6B	98	88.674	ENSMNEG00000042745	TNRC6B	99	88.617	Macaca_nemestrina
ENSPSIG00000005318	TNRC6B	98	88.774	ENSMLEG00000041780	TNRC6B	99	88.717	Mandrillus_leucophaeus
ENSPSIG00000005318	TNRC6B	99	89.077	ENSMGAG00000012333	TNRC6B	99	87.500	Meleagris_gallopavo
ENSPSIG00000005318	TNRC6B	99	86.922	ENSMAUG00000016123	Tnrc6b	98	86.809	Mesocricetus_auratus
ENSPSIG00000005318	TNRC6B	98	88.424	ENSMICG00000014056	TNRC6B	99	88.424	Microcebus_murinus
ENSPSIG00000005318	TNRC6B	96	92.000	ENSMOCG00000020334	Tnrc6b	97	92.000	Microtus_ochrogaster
ENSPSIG00000005318	TNRC6B	99	86.979	MGP_CAROLIEiJ_G0020043	Tnrc6b	97	86.922	Mus_caroli
ENSPSIG00000005318	TNRC6B	99	86.979	ENSMUSG00000047888	Tnrc6b	97	86.866	Mus_musculus
ENSPSIG00000005318	TNRC6B	99	86.979	MGP_PahariEiJ_G0020045	Tnrc6b	97	86.866	Mus_pahari
ENSPSIG00000005318	TNRC6B	99	87.204	MGP_SPRETEiJ_G0020941	Tnrc6b	97	87.091	Mus_spretus
ENSPSIG00000005318	TNRC6B	96	91.985	ENSMPUG00000016442	TNRC6B	96	92.161	Mustela_putorius_furo
ENSPSIG00000005318	TNRC6B	99	84.683	ENSMLUG00000008765	TNRC6B	99	84.081	Myotis_lucifugus
ENSPSIG00000005318	TNRC6B	99	87.247	ENSNGAG00000021294	Tnrc6b	97	87.416	Nannospalax_galili
ENSPSIG00000005318	TNRC6B	88	87.114	ENSNLEG00000015311	TNRC6B	95	90.118	Nomascus_leucogenys
ENSPSIG00000005318	TNRC6B	90	84.348	ENSOPRG00000012054	TNRC6B	88	84.348	Ochotona_princeps
ENSPSIG00000005318	TNRC6B	99	87.852	ENSODEG00000013146	TNRC6B	97	88.133	Octodon_degus
ENSPSIG00000005318	TNRC6B	51	46.472	ENSONIG00000019679	-	99	40.900	Oreochromis_niloticus
ENSPSIG00000005318	TNRC6B	99	87.465	ENSOCUG00000016128	TNRC6B	97	87.804	Oryctolagus_cuniculus
ENSPSIG00000005318	TNRC6B	99	84.796	ENSOGAG00000011096	TNRC6B	99	83.924	Otolemur_garnettii
ENSPSIG00000005318	TNRC6B	99	87.010	ENSOARG00000017238	TNRC6B	97	87.458	Ovis_aries
ENSPSIG00000005318	TNRC6B	98	88.781	ENSPPAG00000028514	TNRC6B	98	88.724	Pan_paniscus
ENSPSIG00000005318	TNRC6B	99	85.145	ENSPPRG00000017741	TNRC6B	95	90.471	Panthera_pardus
ENSPSIG00000005318	TNRC6B	99	81.038	ENSPTIG00000022064	TNRC6B	98	83.190	Panthera_tigris_altaica
ENSPSIG00000005318	TNRC6B	98	88.554	ENSPTRG00000047826	TNRC6B	99	88.497	Pan_troglodytes
ENSPSIG00000005318	TNRC6B	98	81.475	ENSPANG00000009271	TNRC6B	99	84.677	Papio_anubis
ENSPSIG00000005318	TNRC6B	99	86.550	ENSPEMG00000011403	Tnrc6b	97	86.832	Peromyscus_maniculatus_bairdii
ENSPSIG00000005318	TNRC6B	98	85.139	ENSPCIG00000020347	TNRC6B	99	85.423	Phascolarctos_cinereus
ENSPSIG00000005318	TNRC6B	76	48.054	ENSPFOG00000006033	-	99	36.006	Poecilia_formosa
ENSPSIG00000005318	TNRC6B	78	53.846	ENSPMEG00000006371	-	90	53.349	Poecilia_mexicana
ENSPSIG00000005318	TNRC6B	99	83.661	ENSPPYG00000011849	TNRC6B	99	86.189	Pongo_abelii
ENSPSIG00000005318	TNRC6B	72	85.041	ENSPCAG00000008739	TNRC6B	74	83.903	Procavia_capensis
ENSPSIG00000005318	TNRC6B	99	88.111	ENSPCOG00000020790	TNRC6B	99	88.141	Propithecus_coquereli
ENSPSIG00000005318	TNRC6B	92	88.516	ENSPVAG00000004975	TNRC6B	91	88.516	Pteropus_vampyrus
ENSPSIG00000005318	TNRC6B	75	44.214	ENSPNAG00000011713	tnrc6b	85	45.125	Pygocentrus_nattereri
ENSPSIG00000005318	TNRC6B	99	86.275	ENSRNOG00000024907	Tnrc6b	97	86.218	Rattus_norvegicus
ENSPSIG00000005318	TNRC6B	97	88.659	ENSRBIG00000035576	TNRC6B	97	89.870	Rhinopithecus_bieti
ENSPSIG00000005318	TNRC6B	98	88.503	ENSRROG00000031135	TNRC6B	99	88.446	Rhinopithecus_roxellana
ENSPSIG00000005318	TNRC6B	99	85.003	ENSSBOG00000029743	TNRC6B	96	90.000	Saimiri_boliviensis_boliviensis
ENSPSIG00000005318	TNRC6B	99	81.853	ENSSHAG00000009692	TNRC6B	99	80.981	Sarcophilus_harrisii
ENSPSIG00000005318	TNRC6B	66	81.197	ENSSARG00000007971	-	70	81.197	Sorex_araneus
ENSPSIG00000005318	TNRC6B	91	87.478	ENSSPUG00000010801	TNRC6B	100	86.643	Sphenodon_punctatus
ENSPSIG00000005318	TNRC6B	99	87.993	ENSSSCG00000000078	TNRC6B	99	88.331	Sus_scrofa
ENSPSIG00000005318	TNRC6B	93	87.886	ENSTGUG00000010138	-	99	84.894	Taeniopygia_guttata
ENSPSIG00000005318	TNRC6B	99	82.545	ENSTTRG00000011465	TNRC6B	97	82.995	Tursiops_truncatus
ENSPSIG00000005318	TNRC6B	99	87.360	ENSUAMG00000007174	TNRC6B	98	88.844	Ursus_americanus
ENSPSIG00000005318	TNRC6B	98	88.459	ENSUMAG00000014336	TNRC6B	100	88.706	Ursus_maritimus
ENSPSIG00000005318	TNRC6B	68	83.296	ENSVPAG00000001467	TNRC6B	72	83.296	Vicugna_pacos
ENSPSIG00000005318	TNRC6B	99	88.245	ENSVVUG00000007064	TNRC6B	99	88.583	Vulpes_vulpes