EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000005499 (Gene tree)
Gene ID: 102449063
Gene Symbol: CNOT1
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 85316 bases
Position: chrJH210059.1:696257-781572
Accession: 102449063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000005927	Not1	PF04054.15	6.4e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000005962	CNOT1-201	7131	XM_006128075	ENSPSIP00000005927	2376 (aa)	XP_006128137	K7FD17

Gene Model

Click here to download ENSPSIG00000005499's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000005499's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000005499	CNOT1	100	97.769	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSPSIG00000005499	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSPSIG00000005499	CNOT1	100	97.517	ENSAMEG00000017298	CNOT1	100	97.517	Ailuropoda_melanoleuca
ENSPSIG00000005499	CNOT1	90	89.795	ENSACIG00000016003	cnot1	100	89.981	Amphilophus_citrinellus
ENSPSIG00000005499	CNOT1	100	90.176	ENSAPEG00000022342	cnot1	100	90.134	Amphiprion_percula
ENSPSIG00000005499	CNOT1	100	87.290	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSPSIG00000005499	CNOT1	100	98.613	ENSAPLG00000007162	CNOT1	100	98.613	Anas_platyrhynchos
ENSPSIG00000005499	CNOT1	91	97.263	ENSACAG00000001602	CNOT1	98	97.263	Anolis_carolinensis
ENSPSIG00000005499	CNOT1	100	94.889	ENSANAG00000038198	CNOT1	100	94.889	Aotus_nancymaae
ENSPSIG00000005499	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSPSIG00000005499	CNOT1	100	90.745	ENSAMXG00000013170	cnot1	100	91.253	Astyanax_mexicanus
ENSPSIG00000005499	CNOT1	100	97.769	ENSBTAG00000020782	CNOT1	100	98.204	Bos_taurus
ENSPSIG00000005499	CNOT1	82	39.908	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSPSIG00000005499	CNOT1	100	97.811	ENSCJAG00000011318	CNOT1	100	97.811	Callithrix_jacchus
ENSPSIG00000005499	CNOT1	100	97.438	ENSCAFG00000008426	CNOT1	100	97.438	Canis_familiaris
ENSPSIG00000005499	CNOT1	100	96.688	ENSCAFG00020010156	CNOT1	100	96.938	Canis_lupus_dingo
ENSPSIG00000005499	CNOT1	100	97.769	ENSCHIG00000010452	CNOT1	100	97.769	Capra_hircus
ENSPSIG00000005499	CNOT1	100	97.896	ENSTSYG00000006888	CNOT1	100	97.896	Carlito_syrichta
ENSPSIG00000005499	CNOT1	100	93.266	ENSCPOG00000013026	CNOT1	100	93.266	Cavia_porcellus
ENSPSIG00000005499	CNOT1	100	96.170	ENSCCAG00000026333	CNOT1	100	96.170	Cebus_capucinus
ENSPSIG00000005499	CNOT1	100	97.811	ENSCATG00000032625	CNOT1	100	97.811	Cercocebus_atys
ENSPSIG00000005499	CNOT1	100	97.685	ENSCLAG00000006289	CNOT1	100	97.685	Chinchilla_lanigera
ENSPSIG00000005499	CNOT1	100	97.811	ENSCSAG00000004731	CNOT1	100	97.811	Chlorocebus_sabaeus
ENSPSIG00000005499	CNOT1	80	100.000	ENSCHOG00000009712	CNOT1	83	98.940	Choloepus_hoffmanni
ENSPSIG00000005499	CNOT1	98	96.762	ENSCPBG00000026222	CNOT1	99	98.611	Chrysemys_picta_bellii
ENSPSIG00000005499	CNOT1	100	59.014	ENSCING00000009149	-	100	58.914	Ciona_intestinalis
ENSPSIG00000005499	CNOT1	89	63.015	ENSCSAVG00000002414	-	99	63.101	Ciona_savignyi
ENSPSIG00000005499	CNOT1	100	95.696	ENSCANG00000040534	CNOT1	100	95.696	Colobus_angolensis_palliatus
ENSPSIG00000005499	CNOT1	100	97.348	ENSCGRG00001016365	Cnot1	100	97.348	Cricetulus_griseus_chok1gshd
ENSPSIG00000005499	CNOT1	100	97.348	ENSCGRG00000001714	Cnot1	100	97.348	Cricetulus_griseus_crigri
ENSPSIG00000005499	CNOT1	100	83.229	ENSCVAG00000018930	cnot1	100	83.061	Cyprinodon_variegatus
ENSPSIG00000005499	CNOT1	100	89.983	ENSDARG00000004174	cnot1	100	89.983	Danio_rerio
ENSPSIG00000005499	CNOT1	100	95.246	ENSDNOG00000013250	CNOT1	100	95.246	Dasypus_novemcinctus
ENSPSIG00000005499	CNOT1	99	46.212	FBgn0085436	Not1	99	48.762	Drosophila_melanogaster
ENSPSIG00000005499	CNOT1	84	96.988	ENSETEG00000012806	CNOT1	84	96.988	Echinops_telfairi
ENSPSIG00000005499	CNOT1	81	76.532	ENSEBUG00000011534	cnot1	95	76.532	Eptatretus_burgeri
ENSPSIG00000005499	CNOT1	97	98.472	ENSEASG00005005819	CNOT1	100	98.472	Equus_asinus_asinus
ENSPSIG00000005499	CNOT1	100	97.811	ENSECAG00000009889	CNOT1	100	99.439	Equus_caballus
ENSPSIG00000005499	CNOT1	90	97.492	ENSEEUG00000006015	CNOT1	90	97.492	Erinaceus_europaeus
ENSPSIG00000005499	CNOT1	100	89.528	ENSELUG00000014085	cnot1	100	89.284	Esox_lucius
ENSPSIG00000005499	CNOT1	100	97.524	ENSFCAG00000025155	CNOT1	100	97.524	Felis_catus
ENSPSIG00000005499	CNOT1	100	98.611	ENSFALG00000007285	CNOT1	100	98.611	Ficedula_albicollis
ENSPSIG00000005499	CNOT1	100	97.685	ENSFDAG00000013399	CNOT1	100	97.685	Fukomys_damarensis
ENSPSIG00000005499	CNOT1	100	90.088	ENSFHEG00000020574	cnot1	100	90.046	Fundulus_heteroclitus
ENSPSIG00000005499	CNOT1	91	89.125	ENSGMOG00000012864	cnot1	100	89.218	Gadus_morhua
ENSPSIG00000005499	CNOT1	100	98.611	ENSGALG00000002301	CNOT1	100	98.611	Gallus_gallus
ENSPSIG00000005499	CNOT1	100	88.833	ENSGAFG00000015005	cnot1	100	88.833	Gambusia_affinis
ENSPSIG00000005499	CNOT1	91	89.778	ENSGACG00000002606	cnot1	100	95.510	Gasterosteus_aculeatus
ENSPSIG00000005499	CNOT1	100	99.537	ENSGAGG00000022646	CNOT1	100	99.537	Gopherus_agassizii
ENSPSIG00000005499	CNOT1	100	97.727	ENSGGOG00000009547	CNOT1	100	97.727	Gorilla_gorilla
ENSPSIG00000005499	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSPSIG00000005499	CNOT1	100	97.601	ENSHGLG00000014322	CNOT1	100	97.601	Heterocephalus_glaber_female
ENSPSIG00000005499	CNOT1	100	89.256	ENSHCOG00000006501	cnot1	100	89.423	Hippocampus_comes
ENSPSIG00000005499	CNOT1	100	88.716	ENSIPUG00000011915	cnot1	100	89.136	Ictalurus_punctatus
ENSPSIG00000005499	CNOT1	100	97.601	ENSSTOG00000005490	CNOT1	100	97.601	Ictidomys_tridecemlineatus
ENSPSIG00000005499	CNOT1	100	97.138	ENSJJAG00000000633	Cnot1	100	97.138	Jaculus_jaculus
ENSPSIG00000005499	CNOT1	100	89.874	ENSKMAG00000006149	cnot1	100	89.749	Kryptolebias_marmoratus
ENSPSIG00000005499	CNOT1	95	96.607	ENSLBEG00000004740	cnot1	100	96.607	Labrus_bergylta
ENSPSIG00000005499	CNOT1	100	94.823	ENSLACG00000010869	CNOT1	100	94.823	Latimeria_chalumnae
ENSPSIG00000005499	CNOT1	100	92.659	ENSLOCG00000006324	cnot1	100	92.659	Lepisosteus_oculatus
ENSPSIG00000005499	CNOT1	100	97.561	ENSLAFG00000000098	CNOT1	100	97.561	Loxodonta_africana
ENSPSIG00000005499	CNOT1	100	97.559	ENSMFAG00000035888	CNOT1	100	97.559	Macaca_fascicularis
ENSPSIG00000005499	CNOT1	100	97.769	ENSMMUG00000014625	CNOT1	100	97.769	Macaca_mulatta
ENSPSIG00000005499	CNOT1	100	95.006	ENSMNEG00000031820	CNOT1	100	97.758	Macaca_nemestrina
ENSPSIG00000005499	CNOT1	100	96.380	ENSMLEG00000040933	CNOT1	100	96.380	Mandrillus_leucophaeus
ENSPSIG00000005499	CNOT1	100	88.880	ENSMAMG00000016524	cnot1	100	88.959	Mastacembelus_armatus
ENSPSIG00000005499	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSPSIG00000005499	CNOT1	100	98.443	ENSMGAG00000001908	CNOT1	100	98.443	Meleagris_gallopavo
ENSPSIG00000005499	CNOT1	100	97.601	ENSMICG00000007071	CNOT1	100	97.601	Microcebus_murinus
ENSPSIG00000005499	CNOT1	100	97.391	ENSMOCG00000017969	Cnot1	100	97.391	Microtus_ochrogaster
ENSPSIG00000005499	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSPSIG00000005499	CNOT1	100	97.644	ENSMODG00000014199	CNOT1	100	97.644	Monodelphis_domestica
ENSPSIG00000005499	CNOT1	100	90.172	ENSMALG00000008645	cnot1	100	90.214	Monopterus_albus
ENSPSIG00000005499	CNOT1	95	99.048	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	Mus_caroli
ENSPSIG00000005499	CNOT1	100	97.433	ENSMUSG00000036550	Cnot1	100	97.433	Mus_musculus
ENSPSIG00000005499	CNOT1	100	97.391	MGP_PahariEiJ_G0023028	Cnot1	100	97.391	Mus_pahari
ENSPSIG00000005499	CNOT1	100	97.433	MGP_SPRETEiJ_G0032549	Cnot1	100	97.433	Mus_spretus
ENSPSIG00000005499	CNOT1	100	97.811	ENSMPUG00000004830	CNOT1	100	97.811	Mustela_putorius_furo
ENSPSIG00000005499	CNOT1	100	97.222	ENSMLUG00000003728	CNOT1	100	97.222	Myotis_lucifugus
ENSPSIG00000005499	CNOT1	100	97.685	ENSNGAG00000018628	Cnot1	100	97.685	Nannospalax_galili
ENSPSIG00000005499	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSPSIG00000005499	CNOT1	100	97.769	ENSNLEG00000003566	CNOT1	100	97.769	Nomascus_leucogenys
ENSPSIG00000005499	CNOT1	86	97.315	ENSMEUG00000006145	CNOT1	88	97.315	Notamacropus_eugenii
ENSPSIG00000005499	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSPSIG00000005499	CNOT1	100	97.643	ENSODEG00000016337	CNOT1	100	97.643	Octodon_degus
ENSPSIG00000005499	CNOT1	100	90.285	ENSONIG00000007358	cnot1	100	89.992	Oreochromis_niloticus
ENSPSIG00000005499	CNOT1	91	97.583	ENSOANG00000012109	CNOT1	100	97.931	Ornithorhynchus_anatinus
ENSPSIG00000005499	CNOT1	100	97.727	ENSOCUG00000006911	CNOT1	100	97.727	Oryctolagus_cuniculus
ENSPSIG00000005499	CNOT1	100	90.063	ENSORLG00000013734	cnot1	100	90.147	Oryzias_latipes
ENSPSIG00000005499	CNOT1	100	88.534	ENSORLG00020017012	cnot1	100	88.408	Oryzias_latipes_hni
ENSPSIG00000005499	CNOT1	100	88.450	ENSORLG00015007091	cnot1	100	88.156	Oryzias_latipes_hsok
ENSPSIG00000005499	CNOT1	100	87.579	ENSOMEG00000015124	cnot1	100	88.208	Oryzias_melastigma
ENSPSIG00000005499	CNOT1	100	97.643	ENSOGAG00000000543	CNOT1	100	97.643	Otolemur_garnettii
ENSPSIG00000005499	CNOT1	100	97.769	ENSOARG00000001567	CNOT1	100	97.769	Ovis_aries
ENSPSIG00000005499	CNOT1	100	97.769	ENSPPAG00000022013	CNOT1	100	97.769	Pan_paniscus
ENSPSIG00000005499	CNOT1	100	97.811	ENSPPRG00000004867	CNOT1	100	97.811	Panthera_pardus
ENSPSIG00000005499	CNOT1	100	97.811	ENSPTIG00000012589	CNOT1	100	97.811	Panthera_tigris_altaica
ENSPSIG00000005499	CNOT1	100	97.482	ENSPTRG00000008183	CNOT1	100	97.482	Pan_troglodytes
ENSPSIG00000005499	CNOT1	100	94.465	ENSPANG00000020901	CNOT1	100	94.465	Papio_anubis
ENSPSIG00000005499	CNOT1	97	93.118	ENSPKIG00000002914	CNOT1	99	93.118	Paramormyrops_kingsleyae
ENSPSIG00000005499	CNOT1	100	91.943	ENSPKIG00000023538	CNOT1	100	91.943	Paramormyrops_kingsleyae
ENSPSIG00000005499	CNOT1	100	80.956	ENSPMAG00000009381	cnot1	100	80.940	Petromyzon_marinus
ENSPSIG00000005499	CNOT1	100	96.329	ENSPCIG00000007343	CNOT1	100	98.333	Phascolarctos_cinereus
ENSPSIG00000005499	CNOT1	99	89.471	ENSPFOG00000003497	cnot1	100	89.471	Poecilia_formosa
ENSPSIG00000005499	CNOT1	95	96.208	ENSPLAG00000014018	cnot1	100	96.208	Poecilia_latipinna
ENSPSIG00000005499	CNOT1	95	96.208	ENSPMEG00000005868	cnot1	100	96.208	Poecilia_mexicana
ENSPSIG00000005499	CNOT1	95	96.208	ENSPREG00000018793	cnot1	100	96.208	Poecilia_reticulata
ENSPSIG00000005499	CNOT1	100	97.727	ENSPPYG00000007410	CNOT1	100	97.727	Pongo_abelii
ENSPSIG00000005499	CNOT1	90	95.571	ENSPCAG00000003241	CNOT1	90	95.571	Procavia_capensis
ENSPSIG00000005499	CNOT1	100	97.356	ENSPCOG00000027139	CNOT1	100	97.356	Propithecus_coquereli
ENSPSIG00000005499	CNOT1	100	95.160	ENSPVAG00000004243	CNOT1	100	95.160	Pteropus_vampyrus
ENSPSIG00000005499	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSPSIG00000005499	CNOT1	100	89.651	ENSPNAG00000000246	cnot1	100	90.072	Pygocentrus_nattereri
ENSPSIG00000005499	CNOT1	100	97.348	ENSRNOG00000012271	Cnot1	100	97.348	Rattus_norvegicus
ENSPSIG00000005499	CNOT1	100	95.594	ENSRBIG00000044598	CNOT1	100	95.594	Rhinopithecus_bieti
ENSPSIG00000005499	CNOT1	100	97.811	ENSRROG00000000906	CNOT1	100	97.811	Rhinopithecus_roxellana
ENSPSIG00000005499	CNOT1	56	30.882	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSPSIG00000005499	CNOT1	100	93.386	ENSSBOG00000029155	CNOT1	100	93.386	Saimiri_boliviensis_boliviensis
ENSPSIG00000005499	CNOT1	100	97.603	ENSSHAG00000012187	CNOT1	100	97.603	Sarcophilus_harrisii
ENSPSIG00000005499	CNOT1	100	90.231	ENSSFOG00015017614	cnot1	100	90.231	Scleropages_formosus
ENSPSIG00000005499	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSPSIG00000005499	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSPSIG00000005499	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSPSIG00000005499	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSPSIG00000005499	CNOT1	100	90.264	ENSSPAG00000018802	cnot1	100	90.013	Stegastes_partitus
ENSPSIG00000005499	CNOT1	100	97.685	ENSSSCG00000002799	CNOT1	100	98.204	Sus_scrofa
ENSPSIG00000005499	CNOT1	100	98.571	ENSTGUG00000005919	CNOT1	100	98.571	Taeniopygia_guttata
ENSPSIG00000005499	CNOT1	100	88.486	ENSTNIG00000018706	cnot1	100	88.569	Tetraodon_nigroviridis
ENSPSIG00000005499	CNOT1	80	97.887	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSPSIG00000005499	CNOT1	95	97.436	ENSTTRG00000008460	CNOT1	95	97.436	Tursiops_truncatus
ENSPSIG00000005499	CNOT1	100	97.811	ENSUAMG00000009251	CNOT1	100	97.811	Ursus_americanus
ENSPSIG00000005499	CNOT1	100	97.811	ENSUMAG00000021291	CNOT1	100	97.811	Ursus_maritimus
ENSPSIG00000005499	CNOT1	97	95.214	ENSVPAG00000008846	CNOT1	97	95.214	Vicugna_pacos
ENSPSIG00000005499	CNOT1	100	96.688	ENSVVUG00000024037	CNOT1	100	96.938	Vulpes_vulpes
ENSPSIG00000005499	CNOT1	100	89.966	ENSXETG00000015900	cnot1	100	89.757	Xenopus_tropicalis
ENSPSIG00000005499	CNOT1	100	89.001	ENSXCOG00000013552	cnot1	100	89.001	Xiphophorus_couchianus
ENSPSIG00000005499	CNOT1	100	89.043	ENSXMAG00000006031	cnot1	100	89.043	Xiphophorus_maculatus