EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000005536 (Gene tree)
Gene ID: 102443787
Gene Symbol: SHQ1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 125757 bases
Position: chrJH206149.1:1725676-1851432
Accession: 102443787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000005988	SHQ1	PF04925.15	1e-66	1	1
ENSPSIP00000005998	SHQ1	PF04925.15	1e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000006023	SHQ1-201	3025	-	ENSPSIP00000005988	610 (aa)	-	K7FD78
ENSPSIT00000006033	SHQ1-202	2500	XM_006113832	ENSPSIP00000005998	612 (aa)	XP_006113894	K7FD88

Gene Model

Click here to download ENSPSIG00000005536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000005536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000005536	SHQ1	93	65.210	ENSG00000144736	SHQ1	96	87.500	Homo_sapiens
ENSPSIG00000005536	SHQ1	73	61.298	ENSAPOG00000000397	shq1	71	60.626	Acanthochromis_polyacanthus
ENSPSIG00000005536	SHQ1	93	65.499	ENSAMEG00000015140	SHQ1	99	64.706	Ailuropoda_melanoleuca
ENSPSIG00000005536	SHQ1	72	61.556	ENSACIG00000021249	shq1	73	60.987	Amphilophus_citrinellus
ENSPSIG00000005536	SHQ1	73	62.640	ENSAOCG00000023311	shq1	71	61.969	Amphiprion_ocellaris
ENSPSIG00000005536	SHQ1	73	61.969	ENSAPEG00000021686	shq1	72	61.298	Amphiprion_percula
ENSPSIG00000005536	SHQ1	72	61.486	ENSATEG00000008475	shq1	72	61.486	Anabas_testudineus
ENSPSIG00000005536	SHQ1	83	74.314	ENSAPLG00000013926	SHQ1	100	73.047	Anas_platyrhynchos
ENSPSIG00000005536	SHQ1	100	70.358	ENSACAG00000014809	SHQ1	91	70.358	Anolis_carolinensis
ENSPSIG00000005536	SHQ1	91	51.079	ENSANAG00000030500	-	97	51.264	Aotus_nancymaae
ENSPSIG00000005536	SHQ1	91	66.606	ENSANAG00000029241	SHQ1	96	66.606	Aotus_nancymaae
ENSPSIG00000005536	SHQ1	72	59.729	ENSACLG00000023077	shq1	70	58.520	Astatotilapia_calliptera
ENSPSIG00000005536	SHQ1	71	55.787	ENSAMXG00000043822	shq1	75	55.909	Astyanax_mexicanus
ENSPSIG00000005536	SHQ1	93	64.286	ENSBTAG00000005436	SHQ1	99	64.049	Bos_taurus
ENSPSIG00000005536	SHQ1	71	32.215	WBGene00021655	Y48A5A.1	97	32.444	Caenorhabditis_elegans
ENSPSIG00000005536	SHQ1	93	65.734	ENSCJAG00000015131	SHQ1	99	64.510	Callithrix_jacchus
ENSPSIG00000005536	SHQ1	93	64.860	ENSCAFG00000006434	SHQ1	98	65.324	Canis_familiaris
ENSPSIG00000005536	SHQ1	93	65.035	ENSCAFG00020016743	SHQ1	98	65.499	Canis_lupus_dingo
ENSPSIG00000005536	SHQ1	93	64.049	ENSCHIG00000012271	SHQ1	89	64.098	Capra_hircus
ENSPSIG00000005536	SHQ1	93	60.245	ENSTSYG00000014439	SHQ1	99	60.140	Carlito_syrichta
ENSPSIG00000005536	SHQ1	78	63.580	ENSCAPG00000009343	SHQ1	96	68.387	Cavia_aperea
ENSPSIG00000005536	SHQ1	93	60.102	ENSCPOG00000011443	SHQ1	99	59.725	Cavia_porcellus
ENSPSIG00000005536	SHQ1	91	58.484	ENSCCAG00000027080	SHQ1	89	85.417	Cebus_capucinus
ENSPSIG00000005536	SHQ1	90	53.333	ENSCCAG00000036087	-	96	53.333	Cebus_capucinus
ENSPSIG00000005536	SHQ1	93	65.734	ENSCATG00000041238	SHQ1	99	64.685	Cercocebus_atys
ENSPSIG00000005536	SHQ1	93	60.172	ENSCLAG00000004206	SHQ1	77	70.312	Chinchilla_lanigera
ENSPSIG00000005536	SHQ1	79	63.354	ENSCSAG00000011514	SHQ1	98	62.112	Chlorocebus_sabaeus
ENSPSIG00000005536	SHQ1	100	90.820	ENSCPBG00000006441	SHQ1	99	90.820	Chrysemys_picta_bellii
ENSPSIG00000005536	SHQ1	65	41.439	ENSCING00000008013	-	96	39.150	Ciona_intestinalis
ENSPSIG00000005536	SHQ1	68	40.095	ENSCSAVG00000002332	-	98	40.590	Ciona_savignyi
ENSPSIG00000005536	SHQ1	93	65.559	ENSCANG00000039295	SHQ1	99	64.510	Colobus_angolensis_palliatus
ENSPSIG00000005536	SHQ1	93	61.713	ENSCGRG00001012583	Shq1	96	68.487	Cricetulus_griseus_chok1gshd
ENSPSIG00000005536	SHQ1	93	61.713	ENSCGRG00000009849	Shq1	96	68.487	Cricetulus_griseus_crigri
ENSPSIG00000005536	SHQ1	68	61.814	ENSCSEG00000007829	shq1	69	61.927	Cynoglossus_semilaevis
ENSPSIG00000005536	SHQ1	72	61.678	ENSCVAG00000020049	shq1	92	53.321	Cyprinodon_variegatus
ENSPSIG00000005536	SHQ1	93	64.623	ENSDNOG00000033937	SHQ1	98	62.872	Dasypus_novemcinctus
ENSPSIG00000005536	SHQ1	93	56.552	ENSETEG00000005766	SHQ1	99	56.174	Echinops_telfairi
ENSPSIG00000005536	SHQ1	64	48.346	ENSEBUG00000005445	shq1	81	50.413	Eptatretus_burgeri
ENSPSIG00000005536	SHQ1	93	66.257	ENSEASG00005002237	SHQ1	98	66.257	Equus_asinus_asinus
ENSPSIG00000005536	SHQ1	93	65.785	ENSECAG00000015673	SHQ1	96	65.785	Equus_caballus
ENSPSIG00000005536	SHQ1	93	64.974	ENSEEUG00000010568	SHQ1	99	64.860	Erinaceus_europaeus
ENSPSIG00000005536	SHQ1	68	62.169	ENSELUG00000003476	shq1	98	48.889	Esox_lucius
ENSPSIG00000005536	SHQ1	94	64.747	ENSFCAG00000012781	SHQ1	99	64.510	Felis_catus
ENSPSIG00000005536	SHQ1	100	72.951	ENSFALG00000013428	SHQ1	99	72.623	Ficedula_albicollis
ENSPSIG00000005536	SHQ1	73	70.470	ENSFDAG00000005595	SHQ1	91	59.083	Fukomys_damarensis
ENSPSIG00000005536	SHQ1	91	53.584	ENSFHEG00000017552	shq1	99	50.739	Fundulus_heteroclitus
ENSPSIG00000005536	SHQ1	65	58.543	ENSGMOG00000007350	shq1	100	58.291	Gadus_morhua
ENSPSIG00000005536	SHQ1	100	74.098	ENSGALG00000007798	SHQ1	99	73.693	Gallus_gallus
ENSPSIG00000005536	SHQ1	65	58.396	ENSGACG00000011797	shq1	100	58.396	Gasterosteus_aculeatus
ENSPSIG00000005536	SHQ1	93	64.510	ENSGGOG00000034818	SHQ1	99	64.510	Gorilla_gorilla
ENSPSIG00000005536	SHQ1	72	59.955	ENSHBUG00000010857	shq1	72	59.318	Haplochromis_burtoni
ENSPSIG00000005536	SHQ1	93	59.423	ENSHGLG00000003637	SHQ1	90	59.215	Heterocephalus_glaber_female
ENSPSIG00000005536	SHQ1	93	59.625	ENSHGLG00100011957	SHQ1	90	60.413	Heterocephalus_glaber_male
ENSPSIG00000005536	SHQ1	73	58.166	ENSHCOG00000010799	shq1	74	57.399	Hippocampus_comes
ENSPSIG00000005536	SHQ1	72	58.957	ENSIPUG00000001247	shq1	77	58.150	Ictalurus_punctatus
ENSPSIG00000005536	SHQ1	72	71.202	ENSSTOG00000010043	SHQ1	81	70.562	Ictidomys_tridecemlineatus
ENSPSIG00000005536	SHQ1	93	62.281	ENSJJAG00000017611	Shq1	97	68.619	Jaculus_jaculus
ENSPSIG00000005536	SHQ1	72	60.762	ENSKMAG00000004457	shq1	74	60.626	Kryptolebias_marmoratus
ENSPSIG00000005536	SHQ1	98	59.380	ENSLACG00000014243	SHQ1	92	60.229	Latimeria_chalumnae
ENSPSIG00000005536	SHQ1	100	52.236	ENSLOCG00000009970	shq1	96	55.319	Lepisosteus_oculatus
ENSPSIG00000005536	SHQ1	93	65.909	ENSMFAG00000039148	SHQ1	99	64.860	Macaca_fascicularis
ENSPSIG00000005536	SHQ1	93	48.691	ENSMFAG00000037396	-	98	46.248	Macaca_fascicularis
ENSPSIG00000005536	SHQ1	86	63.740	ENSMMUG00000009571	SHQ1	95	62.595	Macaca_mulatta
ENSPSIG00000005536	SHQ1	93	48.517	ENSMMUG00000021761	-	98	46.073	Macaca_mulatta
ENSPSIG00000005536	SHQ1	93	65.909	ENSMNEG00000032667	SHQ1	99	64.860	Macaca_nemestrina
ENSPSIG00000005536	SHQ1	93	65.734	ENSMLEG00000038493	SHQ1	99	64.685	Mandrillus_leucophaeus
ENSPSIG00000005536	SHQ1	100	51.501	ENSMAMG00000023432	shq1	95	50.791	Mastacembelus_armatus
ENSPSIG00000005536	SHQ1	72	59.729	ENSMZEG00005008649	shq1	72	59.091	Maylandia_zebra
ENSPSIG00000005536	SHQ1	100	72.459	ENSMGAG00000009640	SHQ1	99	72.059	Meleagris_gallopavo
ENSPSIG00000005536	SHQ1	93	60.839	ENSMAUG00000022030	Shq1	97	67.364	Mesocricetus_auratus
ENSPSIG00000005536	SHQ1	94	62.564	ENSMICG00000009224	SHQ1	99	61.473	Microcebus_murinus
ENSPSIG00000005536	SHQ1	95	60.413	ENSMOCG00000017836	Shq1	99	69.038	Microtus_ochrogaster
ENSPSIG00000005536	SHQ1	72	59.725	ENSMMOG00000010569	shq1	73	59.725	Mola_mola
ENSPSIG00000005536	SHQ1	90	59.528	ENSMODG00000003926	SHQ1	98	58.909	Monodelphis_domestica
ENSPSIG00000005536	SHQ1	100	51.378	ENSMALG00000008870	shq1	98	50.569	Monopterus_albus
ENSPSIG00000005536	SHQ1	93	61.930	MGP_CAROLIEiJ_G0028689	Shq1	97	69.167	Mus_caroli
ENSPSIG00000005536	SHQ1	93	61.579	ENSMUSG00000035378	Shq1	97	69.167	Mus_musculus
ENSPSIG00000005536	SHQ1	93	62.456	MGP_PahariEiJ_G0022440	Shq1	97	69.456	Mus_pahari
ENSPSIG00000005536	SHQ1	93	62.105	MGP_SPRETEiJ_G0029717	Shq1	98	67.886	Mus_spretus
ENSPSIG00000005536	SHQ1	93	67.075	ENSMPUG00000017006	SHQ1	97	67.075	Mustela_putorius_furo
ENSPSIG00000005536	SHQ1	85	60.345	ENSMLUG00000013539	SHQ1	96	60.980	Myotis_lucifugus
ENSPSIG00000005536	SHQ1	93	55.420	ENSNGAG00000023317	Shq1	99	54.974	Nannospalax_galili
ENSPSIG00000005536	SHQ1	57	57.790	ENSNBRG00000024004	shq1	66	57.307	Neolamprologus_brichardi
ENSPSIG00000005536	SHQ1	93	66.434	ENSNLEG00000002731	SHQ1	99	66.434	Nomascus_leucogenys
ENSPSIG00000005536	SHQ1	78	60.185	ENSMEUG00000009350	-	90	60.185	Notamacropus_eugenii
ENSPSIG00000005536	SHQ1	74	70.044	ENSODEG00000009192	SHQ1	83	70.067	Octodon_degus
ENSPSIG00000005536	SHQ1	72	60.722	ENSONIG00000020264	shq1	72	60.091	Oreochromis_niloticus
ENSPSIG00000005536	SHQ1	94	63.966	ENSOCUG00000016695	SHQ1	99	62.759	Oryctolagus_cuniculus
ENSPSIG00000005536	SHQ1	71	58.891	ENSORLG00000023538	shq1	80	58.036	Oryzias_latipes
ENSPSIG00000005536	SHQ1	71	59.815	ENSORLG00020003697	shq1	79	58.929	Oryzias_latipes_hni
ENSPSIG00000005536	SHQ1	71	59.353	ENSORLG00015021040	shq1	80	58.797	Oryzias_latipes_hsok
ENSPSIG00000005536	SHQ1	80	56.939	ENSOMEG00000001225	shq1	80	59.424	Oryzias_melastigma
ENSPSIG00000005536	SHQ1	93	64.000	ENSOGAG00000003898	SHQ1	100	61.054	Otolemur_garnettii
ENSPSIG00000005536	SHQ1	93	63.149	ENSOARG00000009547	SHQ1	99	63.149	Ovis_aries
ENSPSIG00000005536	SHQ1	93	50.260	ENSPPAG00000043263	-	98	49.742	Pan_paniscus
ENSPSIG00000005536	SHQ1	93	65.385	ENSPPAG00000027714	SHQ1	99	65.385	Pan_paniscus
ENSPSIG00000005536	SHQ1	94	65.445	ENSPPRG00000004769	SHQ1	99	65.210	Panthera_pardus
ENSPSIG00000005536	SHQ1	94	62.435	ENSPTIG00000011478	SHQ1	99	62.195	Panthera_tigris_altaica
ENSPSIG00000005536	SHQ1	93	65.210	ENSPTRG00000015106	SHQ1	99	65.210	Pan_troglodytes
ENSPSIG00000005536	SHQ1	93	49.567	ENSPTRG00000048303	-	98	49.053	Pan_troglodytes
ENSPSIG00000005536	SHQ1	93	65.385	ENSPANG00000002881	SHQ1	99	65.210	Papio_anubis
ENSPSIG00000005536	SHQ1	70	58.741	ENSPKIG00000021517	shq1	76	58.124	Paramormyrops_kingsleyae
ENSPSIG00000005536	SHQ1	72	59.817	ENSPMGG00000008838	shq1	73	59.817	Periophthalmus_magnuspinnatus
ENSPSIG00000005536	SHQ1	93	63.047	ENSPEMG00000000251	Shq1	97	69.583	Peromyscus_maniculatus_bairdii
ENSPSIG00000005536	SHQ1	71	56.208	ENSPMAG00000005372	shq1	98	55.079	Petromyzon_marinus
ENSPSIG00000005536	SHQ1	72	60.948	ENSPFOG00000003118	shq1	81	59.645	Poecilia_formosa
ENSPSIG00000005536	SHQ1	57	59.091	ENSPMEG00000011076	shq1	95	50.614	Poecilia_mexicana
ENSPSIG00000005536	SHQ1	63	59.278	ENSPREG00000000591	shq1	92	51.172	Poecilia_reticulata
ENSPSIG00000005536	SHQ1	93	66.259	ENSPPYG00000013717	SHQ1	99	65.385	Pongo_abelii
ENSPSIG00000005536	SHQ1	91	67.500	ENSPCAG00000009035	SHQ1	97	66.964	Procavia_capensis
ENSPSIG00000005536	SHQ1	94	61.026	ENSPCOG00000008415	SHQ1	99	61.407	Propithecus_coquereli
ENSPSIG00000005536	SHQ1	93	66.200	ENSPVAG00000017392	SHQ1	99	66.200	Pteropus_vampyrus
ENSPSIG00000005536	SHQ1	73	59.152	ENSPNYG00000003878	shq1	72	58.520	Pundamilia_nyererei
ENSPSIG00000005536	SHQ1	71	60.230	ENSPNAG00000026840	shq1	71	60.045	Pygocentrus_nattereri
ENSPSIG00000005536	SHQ1	89	63.419	ENSRNOG00000005433	Shq1	98	59.068	Rattus_norvegicus
ENSPSIG00000005536	SHQ1	93	61.606	ENSRBIG00000026280	SHQ1	99	60.558	Rhinopithecus_bieti
ENSPSIG00000005536	SHQ1	93	65.035	ENSRROG00000034126	SHQ1	99	63.986	Rhinopithecus_roxellana
ENSPSIG00000005536	SHQ1	94	58.783	ENSSBOG00000021038	SHQ1	99	57.913	Saimiri_boliviensis_boliviensis
ENSPSIG00000005536	SHQ1	91	62.478	ENSSHAG00000015077	SHQ1	98	62.478	Sarcophilus_harrisii
ENSPSIG00000005536	SHQ1	73	62.500	ENSSFOG00015016241	shq1	80	62.500	Scleropages_formosus
ENSPSIG00000005536	SHQ1	72	61.036	ENSSMAG00000016151	shq1	72	60.811	Scophthalmus_maximus
ENSPSIG00000005536	SHQ1	71	61.609	ENSSDUG00000011986	shq1	70	60.998	Seriola_dumerili
ENSPSIG00000005536	SHQ1	68	60.145	ENSSLDG00000013908	shq1	70	60.641	Seriola_lalandi_dorsalis
ENSPSIG00000005536	SHQ1	91	53.971	ENSSARG00000007119	SHQ1	96	53.791	Sorex_araneus
ENSPSIG00000005536	SHQ1	84	75.048	ENSSPUG00000011526	-	96	75.629	Sphenodon_punctatus
ENSPSIG00000005536	SHQ1	95	65.172	ENSSSCG00000011518	SHQ1	99	65.172	Sus_scrofa
ENSPSIG00000005536	SHQ1	92	73.721	ENSTGUG00000009933	SHQ1	99	72.444	Taeniopygia_guttata
ENSPSIG00000005536	SHQ1	68	57.212	ENSTRUG00000009446	shq1	74	56.885	Takifugu_rubripes
ENSPSIG00000005536	SHQ1	68	56.355	ENSTNIG00000007354	shq1	97	54.688	Tetraodon_nigroviridis
ENSPSIG00000005536	SHQ1	74	85.106	ENSTBEG00000011295	SHQ1	79	85.106	Tupaia_belangeri
ENSPSIG00000005536	SHQ1	91	65.893	ENSTTRG00000005320	SHQ1	97	65.893	Tursiops_truncatus
ENSPSIG00000005536	SHQ1	94	64.062	ENSUMAG00000024031	SHQ1	99	63.122	Ursus_maritimus
ENSPSIG00000005536	SHQ1	86	58.824	ENSVPAG00000004880	SHQ1	96	60.078	Vicugna_pacos
ENSPSIG00000005536	SHQ1	93	65.035	ENSVVUG00000013906	SHQ1	98	65.499	Vulpes_vulpes
ENSPSIG00000005536	SHQ1	100	55.628	ENSXETG00000032215	shq1	99	55.628	Xenopus_tropicalis