EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000005603 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 6502 bases
Position: chrJH206515.1:194583-201084
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000006032	zf-C2H2	PF00096.26	9.3e-55	1	9
ENSPSIP00000006032	zf-C2H2	PF00096.26	9.3e-55	2	9
ENSPSIP00000006032	zf-C2H2	PF00096.26	9.3e-55	3	9
ENSPSIP00000006032	zf-C2H2	PF00096.26	9.3e-55	4	9
ENSPSIP00000006032	zf-C2H2	PF00096.26	9.3e-55	5	9
ENSPSIP00000006032	zf-C2H2	PF00096.26	9.3e-55	6	9
ENSPSIP00000006032	zf-C2H2	PF00096.26	9.3e-55	7	9
ENSPSIP00000006032	zf-C2H2	PF00096.26	9.3e-55	8	9
ENSPSIP00000006032	zf-C2H2	PF00096.26	9.3e-55	9	9
ENSPSIP00000006032	zf-met	PF12874.7	7.8e-07	1	2
ENSPSIP00000006032	zf-met	PF12874.7	7.8e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000006067	-	1927	-	ENSPSIP00000006032	541 (aa)	-	K7FDC2

Gene Model

Click here to download ENSPSIG00000005603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000005603's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000005603	-	85	53.358	ENSPSIG00000009650	-	83	53.358
ENSPSIG00000005603	-	77	51.980	ENSPSIG00000000522	-	100	51.980
ENSPSIG00000005603	-	99	48.077	ENSPSIG00000002565	-	96	48.077
ENSPSIG00000005603	-	80	59.677	ENSPSIG00000000333	-	99	59.677
ENSPSIG00000005603	-	56	44.118	ENSPSIG00000002913	OVOL1	53	44.118
ENSPSIG00000005603	-	65	44.444	ENSPSIG00000012112	GFI1B	53	44.444
ENSPSIG00000005603	-	72	39.932	ENSPSIG00000000760	-	91	39.932
ENSPSIG00000005603	-	62	51.770	ENSPSIG00000016247	-	53	51.770
ENSPSIG00000005603	-	94	52.885	ENSPSIG00000009893	-	99	52.885
ENSPSIG00000005603	-	64	45.872	ENSPSIG00000011896	ZIC3	50	45.872
ENSPSIG00000005603	-	67	47.727	ENSPSIG00000000672	-	84	47.727
ENSPSIG00000005603	-	82	39.552	ENSPSIG00000004262	SNAI3	85	39.552
ENSPSIG00000005603	-	89	43.445	ENSPSIG00000003152	-	98	43.620
ENSPSIG00000005603	-	95	48.571	ENSPSIG00000010328	-	96	48.571
ENSPSIG00000005603	-	76	55.649	ENSPSIG00000002569	-	93	55.649
ENSPSIG00000005603	-	66	40.278	ENSPSIG00000004682	ZNF652	63	40.278
ENSPSIG00000005603	-	70	42.450	ENSPSIG00000008588	-	100	47.154
ENSPSIG00000005603	-	59	38.060	ENSPSIG00000016395	SNAI2	56	38.060
ENSPSIG00000005603	-	68	35.714	ENSPSIG00000013505	PRDM5	91	35.817
ENSPSIG00000005603	-	68	70.482	ENSPSIG00000009603	-	99	70.482
ENSPSIG00000005603	-	97	50.847	ENSPSIG00000016380	-	98	50.847
ENSPSIG00000005603	-	67	31.402	ENSPSIG00000005522	ZNF646	98	31.402
ENSPSIG00000005603	-	98	64.780	ENSPSIG00000013021	-	99	64.780
ENSPSIG00000005603	-	73	37.569	ENSPSIG00000016553	-	59	37.569
ENSPSIG00000005603	-	81	58.661	ENSPSIG00000000075	-	92	58.661
ENSPSIG00000005603	-	83	40.969	ENSPSIG00000012650	-	93	40.969
ENSPSIG00000005603	-	82	51.695	ENSPSIG00000009270	-	86	51.695
ENSPSIG00000005603	-	73	44.262	ENSPSIG00000005537	ZBTB14	60	44.262
ENSPSIG00000005603	-	96	53.061	ENSPSIG00000015465	-	98	53.061
ENSPSIG00000005603	-	66	37.075	ENSPSIG00000004303	ZNF319	84	39.031
ENSPSIG00000005603	-	65	43.307	ENSPSIG00000004647	-	50	43.307
ENSPSIG00000005603	-	73	38.571	ENSPSIG00000002538	ZNF521	67	38.571
ENSPSIG00000005603	-	69	38.177	ENSPSIG00000006586	-	99	38.177
ENSPSIG00000005603	-	77	46.411	ENSPSIG00000001739	-	99	46.411
ENSPSIG00000005603	-	66	64.444	ENSPSIG00000005128	-	100	64.444
ENSPSIG00000005603	-	97	60.569	ENSPSIG00000005672	-	99	60.569
ENSPSIG00000005603	-	76	50.679	ENSPSIG00000001026	-	98	50.679
ENSPSIG00000005603	-	65	52.632	ENSPSIG00000000943	ZNF770	99	52.632
ENSPSIG00000005603	-	99	64.311	ENSPSIG00000015459	-	100	65.428
ENSPSIG00000005603	-	59	37.410	ENSPSIG00000003607	SNAI1	54	37.410
ENSPSIG00000005603	-	68	56.091	ENSPSIG00000010405	-	99	56.091
ENSPSIG00000005603	-	84	50.761	ENSPSIG00000016033	-	62	50.761
ENSPSIG00000005603	-	96	47.812	ENSPSIG00000012865	-	98	45.797
ENSPSIG00000005603	-	68	45.033	ENSPSIG00000008734	GFI1	53	45.033
ENSPSIG00000005603	-	99	66.667	ENSPSIG00000004502	-	94	66.667
ENSPSIG00000005603	-	68	61.404	ENSPSIG00000006790	-	88	61.404
ENSPSIG00000005603	-	96	49.719	ENSPSIG00000004614	-	99	49.719
ENSPSIG00000005603	-	81	56.279	ENSPSIG00000015216	-	98	56.279
ENSPSIG00000005603	-	65	40.278	ENSPSIG00000011562	-	84	40.278
ENSPSIG00000005603	-	99	56.966	ENSPSIG00000010248	-	96	56.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000005603	-	77	44.403	ENSACAG00000024898	-	100	44.403	Anolis_carolinensis
ENSPSIG00000005603	-	96	48.347	ENSACAG00000024956	-	99	49.254	Anolis_carolinensis
ENSPSIG00000005603	-	69	51.397	ENSACAG00000008664	-	65	51.397	Anolis_carolinensis
ENSPSIG00000005603	-	66	52.857	ENSAMXG00000034847	-	85	52.857	Astyanax_mexicanus
ENSPSIG00000005603	-	66	56.566	ENSAMXG00000032841	-	78	56.566	Astyanax_mexicanus
ENSPSIG00000005603	-	65	55.752	ENSAMXG00000042784	-	91	55.752	Astyanax_mexicanus
ENSPSIG00000005603	-	71	50.207	ENSAMXG00000034344	-	76	49.587	Astyanax_mexicanus
ENSPSIG00000005603	-	68	49.713	ENSAMXG00000038536	-	83	49.713	Astyanax_mexicanus
ENSPSIG00000005603	-	68	48.851	ENSAMXG00000042746	-	83	48.851	Astyanax_mexicanus
ENSPSIG00000005603	-	64	57.235	ENSAMXG00000038636	-	98	57.235	Astyanax_mexicanus
ENSPSIG00000005603	-	67	49.638	ENSAMXG00000038325	-	94	49.638	Astyanax_mexicanus
ENSPSIG00000005603	-	67	55.679	ENSAMXG00000025452	-	96	55.679	Astyanax_mexicanus
ENSPSIG00000005603	-	68	43.571	ENSAMXG00000035246	-	68	43.571	Astyanax_mexicanus
ENSPSIG00000005603	-	66	55.678	ENSAMXG00000036233	-	80	55.678	Astyanax_mexicanus
ENSPSIG00000005603	-	68	51.099	ENSAMXG00000010805	-	94	51.099	Astyanax_mexicanus
ENSPSIG00000005603	-	68	44.068	ENSBTAG00000038322	-	75	44.068	Bos_taurus
ENSPSIG00000005603	-	81	57.812	ENSCPBG00000026433	-	72	57.812	Chrysemys_picta_bellii
ENSPSIG00000005603	-	90	31.907	ENSCPBG00000008580	-	98	31.907	Chrysemys_picta_bellii
ENSPSIG00000005603	-	67	43.494	ENSCPBG00000001526	-	82	43.494	Chrysemys_picta_bellii
ENSPSIG00000005603	-	71	42.177	ENSCPBG00000013652	-	66	42.177	Chrysemys_picta_bellii
ENSPSIG00000005603	-	68	40.957	ENSCSAVG00000010960	-	100	40.741	Ciona_savignyi
ENSPSIG00000005603	-	65	44.393	ENSDNOG00000047495	-	78	44.393	Dasypus_novemcinctus
ENSPSIG00000005603	-	69	42.703	ENSEBUG00000005264	-	75	42.703	Eptatretus_burgeri
ENSPSIG00000005603	-	66	46.445	ENSEBUG00000011694	-	95	46.445	Eptatretus_burgeri
ENSPSIG00000005603	-	69	47.059	ENSEBUG00000012919	-	75	47.059	Eptatretus_burgeri
ENSPSIG00000005603	-	70	44.986	ENSEBUG00000002075	-	75	46.552	Eptatretus_burgeri
ENSPSIG00000005603	-	65	38.211	ENSEBUG00000013875	-	84	38.211	Eptatretus_burgeri
ENSPSIG00000005603	-	70	42.765	ENSEBUG00000015837	-	79	42.029	Eptatretus_burgeri
ENSPSIG00000005603	-	67	50.311	ENSEBUG00000011435	-	75	44.652	Eptatretus_burgeri
ENSPSIG00000005603	-	67	40.826	ENSEBUG00000014717	-	73	40.826	Eptatretus_burgeri
ENSPSIG00000005603	-	69	43.529	ENSEBUG00000008306	-	78	43.529	Eptatretus_burgeri
ENSPSIG00000005603	-	68	43.277	ENSEASG00005004469	-	70	43.277	Equus_asinus_asinus
ENSPSIG00000005603	-	67	53.623	ENSGMOG00000018506	-	100	37.500	Gadus_morhua
ENSPSIG00000005603	-	71	49.841	ENSGALG00000054325	-	97	49.841	Gallus_gallus
ENSPSIG00000005603	-	67	53.439	ENSGALG00000053507	-	77	53.439	Gallus_gallus
ENSPSIG00000005603	-	69	45.370	ENSGALG00000049609	-	58	45.370	Gallus_gallus
ENSPSIG00000005603	-	98	51.977	ENSGALG00000044069	-	83	51.977	Gallus_gallus
ENSPSIG00000005603	-	82	44.695	ENSGALG00000055127	-	83	44.695	Gallus_gallus
ENSPSIG00000005603	-	67	53.819	ENSGALG00000046336	-	100	53.819	Gallus_gallus
ENSPSIG00000005603	-	65	50.000	ENSGACG00000006283	-	99	49.533	Gasterosteus_aculeatus
ENSPSIG00000005603	-	73	54.331	ENSGAGG00000018885	-	75	54.331	Gopherus_agassizii
ENSPSIG00000005603	-	67	51.152	ENSGAGG00000011399	-	88	51.152	Gopherus_agassizii
ENSPSIG00000005603	-	67	44.286	ENSGAGG00000011366	-	85	44.286	Gopherus_agassizii
ENSPSIG00000005603	-	68	40.584	ENSHCOG00000018201	-	83	40.584	Hippocampus_comes
ENSPSIG00000005603	-	70	36.449	ENSIPUG00000012109	ZN12	57	36.449	Ictalurus_punctatus
ENSPSIG00000005603	-	83	50.000	ENSIPUG00000015468	-	91	58.333	Ictalurus_punctatus
ENSPSIG00000005603	-	89	50.975	ENSIPUG00000021515	-	94	50.975	Ictalurus_punctatus
ENSPSIG00000005603	-	65	41.558	ENSJJAG00000023633	Zfp672	90	41.901	Jaculus_jaculus
ENSPSIG00000005603	-	95	46.705	ENSLACG00000022211	-	98	46.705	Latimeria_chalumnae
ENSPSIG00000005603	-	71	42.387	ENSLACG00000009005	-	100	41.606	Latimeria_chalumnae
ENSPSIG00000005603	-	73	39.175	ENSLACG00000005264	-	99	38.344	Latimeria_chalumnae
ENSPSIG00000005603	-	65	45.714	ENSLOCG00000014210	-	56	45.714	Lepisosteus_oculatus
ENSPSIG00000005603	-	67	45.070	ENSLOCG00000017864	-	99	45.070	Lepisosteus_oculatus
ENSPSIG00000005603	-	67	52.521	ENSMGAG00000013362	-	100	52.521	Meleagris_gallopavo
ENSPSIG00000005603	-	66	44.000	ENSMAUG00000009945	Zfp672	88	44.000	Mesocricetus_auratus
ENSPSIG00000005603	-	66	44.186	ENSMMOG00000003923	-	88	44.186	Mola_mola
ENSPSIG00000005603	-	96	43.305	ENSMODG00000001880	-	99	43.305	Monodelphis_domestica
ENSPSIG00000005603	-	96	47.191	ENSMODG00000010532	-	99	47.191	Monodelphis_domestica
ENSPSIG00000005603	-	67	40.506	MGP_CAROLIEiJ_G0016391	Zfp672	100	55.556	Mus_caroli
ENSPSIG00000005603	-	95	51.931	MGP_CAROLIEiJ_G0030502	-	92	51.931	Mus_caroli
ENSPSIG00000005603	-	98	50.667	ENSMUSG00000030823	9130019O22Rik	94	50.667	Mus_musculus
ENSPSIG00000005603	-	68	48.018	MGP_SPRETEiJ_G0031613	-	84	48.018	Mus_spretus
ENSPSIG00000005603	-	67	40.506	MGP_SPRETEiJ_G0017233	Zfp672	100	54.167	Mus_spretus
ENSPSIG00000005603	-	96	54.545	ENSNGAG00000015777	Zim1	94	54.545	Nannospalax_galili
ENSPSIG00000005603	-	73	42.553	ENSNBRG00000007276	-	56	42.553	Neolamprologus_brichardi
ENSPSIG00000005603	-	71	41.392	ENSNBRG00000000708	-	95	42.448	Neolamprologus_brichardi
ENSPSIG00000005603	-	65	51.402	ENSORLG00020001922	-	87	46.341	Oryzias_latipes_hni
ENSPSIG00000005603	-	66	49.533	ENSOMEG00000001598	-	63	49.533	Oryzias_melastigma
ENSPSIG00000005603	-	68	46.009	ENSPREG00000002642	-	91	46.009	Poecilia_reticulata
ENSPSIG00000005603	-	76	47.541	ENSPNYG00000015486	-	65	47.541	Pundamilia_nyererei
ENSPSIG00000005603	-	66	53.846	ENSPNAG00000000088	-	86	53.846	Pygocentrus_nattereri
ENSPSIG00000005603	-	54	55.981	ENSPNAG00000018395	-	63	55.981	Pygocentrus_nattereri
ENSPSIG00000005603	-	68	44.737	ENSRNOG00000002713	Zfp672	88	44.737	Rattus_norvegicus
ENSPSIG00000005603	-	96	43.539	ENSSHAG00000018106	-	99	43.539	Sarcophilus_harrisii
ENSPSIG00000005603	-	71	52.707	ENSSFOG00015019818	-	71	52.707	Scleropages_formosus
ENSPSIG00000005603	-	68	43.316	ENSSMAG00000004252	-	89	43.716	Scophthalmus_maximus
ENSPSIG00000005603	-	81	53.712	ENSSPUG00000004366	-	67	53.712	Sphenodon_punctatus
ENSPSIG00000005603	-	73	47.714	ENSSPUG00000010016	-	95	50.720	Sphenodon_punctatus
ENSPSIG00000005603	-	67	52.083	ENSSPAG00000021653	-	91	52.083	Stegastes_partitus
ENSPSIG00000005603	-	68	61.224	ENSTGUG00000018351	-	100	61.224	Taeniopygia_guttata
ENSPSIG00000005603	-	69	53.055	ENSTGUG00000015210	-	100	53.055	Taeniopygia_guttata
ENSPSIG00000005603	-	94	31.455	ENSTRUG00000022066	-	92	44.615	Takifugu_rubripes
ENSPSIG00000005603	-	68	40.533	ENSXETG00000031192	-	100	40.533	Xenopus_tropicalis
ENSPSIG00000005603	-	67	55.797	ENSXCOG00000006553	-	87	55.797	Xiphophorus_couchianus
ENSPSIG00000005603	-	65	41.277	ENSXMAG00000026680	-	84	41.277	Xiphophorus_maculatus