EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000005672 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 3754 bases
Position: chrJH209155.1:51176-54929
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000006116	zf-C2H2	PF00096.26	6.2e-55	1	9
ENSPSIP00000006116	zf-C2H2	PF00096.26	6.2e-55	2	9
ENSPSIP00000006116	zf-C2H2	PF00096.26	6.2e-55	3	9
ENSPSIP00000006116	zf-C2H2	PF00096.26	6.2e-55	4	9
ENSPSIP00000006116	zf-C2H2	PF00096.26	6.2e-55	5	9
ENSPSIP00000006116	zf-C2H2	PF00096.26	6.2e-55	6	9
ENSPSIP00000006116	zf-C2H2	PF00096.26	6.2e-55	7	9
ENSPSIP00000006116	zf-C2H2	PF00096.26	6.2e-55	8	9
ENSPSIP00000006116	zf-C2H2	PF00096.26	6.2e-55	9	9
ENSPSIP00000006116	zf-met	PF12874.7	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000006153	-	1260	-	ENSPSIP00000006116	419 (aa)	-	K7FDK6

Gene Model

Click here to download ENSPSIG00000005672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000005672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000005672	-	65	49.038	ENSPSIG00000009650	-	74	49.038
ENSPSIG00000005672	-	80	45.965	ENSPSIG00000001026	-	91	50.000
ENSPSIG00000005672	-	64	50.602	ENSPSIG00000006790	-	94	50.602
ENSPSIG00000005672	-	60	35.673	ENSPSIG00000011562	-	90	32.870
ENSPSIG00000005672	-	97	54.386	ENSPSIG00000012865	-	98	55.502
ENSPSIG00000005672	-	75	54.812	ENSPSIG00000002569	-	95	54.812
ENSPSIG00000005672	-	64	46.040	ENSPSIG00000004647	-	50	45.045
ENSPSIG00000005672	-	62	45.872	ENSPSIG00000011896	ZIC3	50	45.872
ENSPSIG00000005672	-	67	40.769	ENSPSIG00000006586	-	99	40.769
ENSPSIG00000005672	-	73	47.082	ENSPSIG00000003152	-	80	47.082
ENSPSIG00000005672	-	99	60.569	ENSPSIG00000005603	-	97	60.569
ENSPSIG00000005672	-	67	47.692	ENSPSIG00000000943	ZNF770	57	47.692
ENSPSIG00000005672	-	82	36.715	ENSPSIG00000005522	ZNF646	93	42.029
ENSPSIG00000005672	-	63	42.361	ENSPSIG00000016395	SNAI2	53	42.361
ENSPSIG00000005672	-	88	42.754	ENSPSIG00000005537	ZBTB14	63	42.754
ENSPSIG00000005672	-	100	62.542	ENSPSIG00000010248	-	95	62.542
ENSPSIG00000005672	-	99	72.500	ENSPSIG00000002565	-	74	72.500
ENSPSIG00000005672	-	78	68.635	ENSPSIG00000009603	-	99	68.635
ENSPSIG00000005672	-	62	41.304	ENSPSIG00000004682	ZNF652	65	41.304
ENSPSIG00000005672	-	95	44.079	ENSPSIG00000009893	-	99	42.080
ENSPSIG00000005672	-	97	42.892	ENSPSIG00000010328	-	96	44.954
ENSPSIG00000005672	-	71	35.955	ENSPSIG00000002538	ZNF521	50	35.955
ENSPSIG00000005672	-	79	71.761	ENSPSIG00000000333	-	90	71.761
ENSPSIG00000005672	-	77	54.054	ENSPSIG00000000522	-	93	54.054
ENSPSIG00000005672	-	67	50.000	ENSPSIG00000016247	-	52	50.000
ENSPSIG00000005672	-	71	64.865	ENSPSIG00000005128	-	100	64.865
ENSPSIG00000005672	-	63	41.549	ENSPSIG00000004262	SNAI3	56	41.549
ENSPSIG00000005672	-	60	34.615	ENSPSIG00000002913	OVOL1	54	34.615
ENSPSIG00000005672	-	65	38.033	ENSPSIG00000004303	ZNF319	93	38.033
ENSPSIG00000005672	-	100	64.655	ENSPSIG00000013021	-	99	64.655
ENSPSIG00000005672	-	73	36.328	ENSPSIG00000013505	PRDM5	68	36.328
ENSPSIG00000005672	-	52	34.653	ENSPSIG00000006768	OVOL2	50	34.653
ENSPSIG00000005672	-	76	46.032	ENSPSIG00000000760	-	95	46.032
ENSPSIG00000005672	-	64	47.059	ENSPSIG00000000672	-	92	47.059
ENSPSIG00000005672	-	80	45.399	ENSPSIG00000008734	GFI1	59	45.399
ENSPSIG00000005672	-	72	61.798	ENSPSIG00000010405	-	99	61.798
ENSPSIG00000005672	-	99	59.912	ENSPSIG00000015459	-	98	59.912
ENSPSIG00000005672	-	79	56.109	ENSPSIG00000015216	-	85	56.109
ENSPSIG00000005672	-	99	52.652	ENSPSIG00000016380	-	98	52.652
ENSPSIG00000005672	-	99	45.455	ENSPSIG00000004614	-	99	45.455
ENSPSIG00000005672	-	66	51.948	ENSPSIG00000008588	-	100	51.948
ENSPSIG00000005672	-	64	51.460	ENSPSIG00000012650	-	75	51.460
ENSPSIG00000005672	-	74	43.961	ENSPSIG00000001739	-	99	43.961
ENSPSIG00000005672	-	62	35.673	ENSPSIG00000016553	-	52	35.673
ENSPSIG00000005672	-	100	63.317	ENSPSIG00000004502	-	88	56.579
ENSPSIG00000005672	-	61	40.972	ENSPSIG00000003607	SNAI1	55	40.972
ENSPSIG00000005672	-	79	57.627	ENSPSIG00000000075	-	84	57.627
ENSPSIG00000005672	-	99	52.609	ENSPSIG00000015465	-	99	50.769
ENSPSIG00000005672	-	90	47.150	ENSPSIG00000009270	-	67	47.150

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000005672	-	71	43.359	ENSACAG00000024898	-	98	43.359	Anolis_carolinensis
ENSPSIG00000005672	-	67	56.710	ENSACAG00000008664	-	66	56.710	Anolis_carolinensis
ENSPSIG00000005672	-	97	47.955	ENSACAG00000024956	-	99	47.955	Anolis_carolinensis
ENSPSIG00000005672	-	79	51.220	ENSAMXG00000042784	-	92	53.913	Astyanax_mexicanus
ENSPSIG00000005672	-	57	44.286	ENSAMXG00000035246	-	67	44.286	Astyanax_mexicanus
ENSPSIG00000005672	-	67	55.372	ENSAMXG00000036233	-	80	55.372	Astyanax_mexicanus
ENSPSIG00000005672	-	67	57.091	ENSAMXG00000038636	-	94	57.091	Astyanax_mexicanus
ENSPSIG00000005672	-	73	51.037	ENSAMXG00000034344	-	85	51.037	Astyanax_mexicanus
ENSPSIG00000005672	-	67	53.774	ENSAMXG00000032841	-	79	53.774	Astyanax_mexicanus
ENSPSIG00000005672	-	71	45.896	ENSAMXG00000038325	-	90	46.853	Astyanax_mexicanus
ENSPSIG00000005672	-	74	50.545	ENSAMXG00000038536	-	96	50.855	Astyanax_mexicanus
ENSPSIG00000005672	-	83	56.158	ENSAMXG00000025452	-	99	56.158	Astyanax_mexicanus
ENSPSIG00000005672	-	84	51.931	ENSAMXG00000010805	-	97	51.931	Astyanax_mexicanus
ENSPSIG00000005672	-	73	50.182	ENSAMXG00000042746	-	96	51.282	Astyanax_mexicanus
ENSPSIG00000005672	-	72	55.844	ENSAMXG00000034847	-	86	55.844	Astyanax_mexicanus
ENSPSIG00000005672	-	66	44.397	ENSBTAG00000038322	-	75	44.397	Bos_taurus
ENSPSIG00000005672	-	65	53.279	ENSCPBG00000026433	-	54	52.903	Chrysemys_picta_bellii
ENSPSIG00000005672	-	78	42.231	ENSCPBG00000008580	-	81	42.775	Chrysemys_picta_bellii
ENSPSIG00000005672	-	67	47.191	ENSCPBG00000001526	-	85	47.191	Chrysemys_picta_bellii
ENSPSIG00000005672	-	79	39.442	ENSCPBG00000013652	-	67	40.265	Chrysemys_picta_bellii
ENSPSIG00000005672	-	70	45.192	ENSCSAVG00000010960	-	99	46.903	Ciona_savignyi
ENSPSIG00000005672	-	71	42.241	ENSDNOG00000047495	-	78	42.241	Dasypus_novemcinctus
ENSPSIG00000005672	-	73	49.029	ENSEBUG00000008306	-	79	49.029	Eptatretus_burgeri
ENSPSIG00000005672	-	73	45.259	ENSEBUG00000002075	-	75	45.259	Eptatretus_burgeri
ENSPSIG00000005672	-	64	38.261	ENSEBUG00000013875	-	73	38.261	Eptatretus_burgeri
ENSPSIG00000005672	-	79	44.747	ENSEBUG00000011694	-	93	44.747	Eptatretus_burgeri
ENSPSIG00000005672	-	74	45.714	ENSEBUG00000015837	-	78	44.718	Eptatretus_burgeri
ENSPSIG00000005672	-	73	43.083	ENSEBUG00000014717	-	72	43.083	Eptatretus_burgeri
ENSPSIG00000005672	-	73	46.923	ENSEBUG00000012919	-	71	46.923	Eptatretus_burgeri
ENSPSIG00000005672	-	71	44.105	ENSEBUG00000005264	-	73	44.105	Eptatretus_burgeri
ENSPSIG00000005672	-	76	41.727	ENSEBUG00000011435	-	83	41.727	Eptatretus_burgeri
ENSPSIG00000005672	-	64	42.672	ENSEASG00005004469	-	69	42.672	Equus_asinus_asinus
ENSPSIG00000005672	-	64	42.544	ENSGMOG00000018506	-	100	42.544	Gadus_morhua
ENSPSIG00000005672	-	64	53.275	ENSGALG00000046336	-	99	53.275	Gallus_gallus
ENSPSIG00000005672	-	64	48.276	ENSGALG00000055127	-	72	47.685	Gallus_gallus
ENSPSIG00000005672	-	67	48.540	ENSGALG00000053507	-	78	48.540	Gallus_gallus
ENSPSIG00000005672	-	79	48.175	ENSGALG00000054325	-	97	48.175	Gallus_gallus
ENSPSIG00000005672	-	98	55.431	ENSGALG00000044069	-	83	55.431	Gallus_gallus
ENSPSIG00000005672	-	64	46.087	ENSGALG00000049609	-	55	46.087	Gallus_gallus
ENSPSIG00000005672	-	57	41.429	ENSGACG00000006283	-	96	34.025	Gasterosteus_aculeatus
ENSPSIG00000005672	-	70	49.780	ENSGAGG00000018885	-	66	49.780	Gopherus_agassizii
ENSPSIG00000005672	-	73	47.636	ENSGAGG00000011366	-	92	47.636	Gopherus_agassizii
ENSPSIG00000005672	-	67	54.187	ENSGAGG00000011399	-	85	54.187	Gopherus_agassizii
ENSPSIG00000005672	-	67	39.630	ENSHCOG00000018201	-	84	39.630	Hippocampus_comes
ENSPSIG00000005672	-	98	54.444	ENSIPUG00000015468	-	90	54.444	Ictalurus_punctatus
ENSPSIG00000005672	-	69	49.470	ENSIPUG00000021515	-	85	49.470	Ictalurus_punctatus
ENSPSIG00000005672	-	73	44.693	ENSIPUG00000012109	ZN12	56	44.693	Ictalurus_punctatus
ENSPSIG00000005672	-	66	51.852	ENSJJAG00000023633	Zfp672	89	51.852	Jaculus_jaculus
ENSPSIG00000005672	-	73	46.786	ENSLACG00000022211	-	74	46.786	Latimeria_chalumnae
ENSPSIG00000005672	-	73	41.423	ENSLACG00000009005	-	99	41.423	Latimeria_chalumnae
ENSPSIG00000005672	-	71	39.928	ENSLACG00000005264	-	97	39.928	Latimeria_chalumnae
ENSPSIG00000005672	-	61	39.901	ENSLOCG00000014210	-	51	37.872	Lepisosteus_oculatus
ENSPSIG00000005672	-	64	41.304	ENSLOCG00000017864	-	99	41.304	Lepisosteus_oculatus
ENSPSIG00000005672	-	67	50.190	ENSMGAG00000013362	-	100	50.190	Meleagris_gallopavo
ENSPSIG00000005672	-	63	53.704	ENSMAUG00000009945	Zfp672	89	53.704	Mesocricetus_auratus
ENSPSIG00000005672	-	68	44.099	ENSMMOG00000003923	-	82	44.099	Mola_mola
ENSPSIG00000005672	-	72	47.486	ENSMODG00000010532	-	86	46.269	Monodelphis_domestica
ENSPSIG00000005672	-	96	47.445	ENSMODG00000001880	-	99	47.445	Monodelphis_domestica
ENSPSIG00000005672	-	95	44.397	MGP_CAROLIEiJ_G0030502	-	92	49.533	Mus_caroli
ENSPSIG00000005672	-	67	49.776	MGP_CAROLIEiJ_G0016391	Zfp672	99	46.250	Mus_caroli
ENSPSIG00000005672	-	97	47.154	ENSMUSG00000030823	9130019O22Rik	90	47.154	Mus_musculus
ENSPSIG00000005672	-	67	49.776	MGP_SPRETEiJ_G0017233	Zfp672	89	51.220	Mus_spretus
ENSPSIG00000005672	-	73	51.923	MGP_SPRETEiJ_G0031613	-	75	51.923	Mus_spretus
ENSPSIG00000005672	-	98	40.086	ENSNGAG00000015777	Zim1	94	40.086	Nannospalax_galili
ENSPSIG00000005672	-	76	45.045	ENSNBRG00000000708	-	87	45.045	Neolamprologus_brichardi
ENSPSIG00000005672	-	61	38.095	ENSNBRG00000007276	-	55	38.095	Neolamprologus_brichardi
ENSPSIG00000005672	-	58	49.194	ENSORLG00020001922	-	86	47.183	Oryzias_latipes_hni
ENSPSIG00000005672	-	64	47.692	ENSOMEG00000001598	-	75	47.692	Oryzias_melastigma
ENSPSIG00000005672	-	73	43.214	ENSPREG00000002642	-	99	43.214	Poecilia_reticulata
ENSPSIG00000005672	-	57	54.412	ENSPNAG00000018395	-	59	53.670	Pygocentrus_nattereri
ENSPSIG00000005672	-	64	52.551	ENSPNAG00000000088	-	91	52.551	Pygocentrus_nattereri
ENSPSIG00000005672	-	65	49.327	ENSRNOG00000002713	Zfp672	90	49.327	Rattus_norvegicus
ENSPSIG00000005672	-	97	43.911	ENSSHAG00000018106	-	99	43.911	Sarcophilus_harrisii
ENSPSIG00000005672	-	99	43.415	ENSSFOG00015019818	-	84	43.415	Scleropages_formosus
ENSPSIG00000005672	-	71	39.091	ENSSMAG00000004252	-	88	40.154	Scophthalmus_maximus
ENSPSIG00000005672	-	99	51.948	ENSSPUG00000004366	-	74	51.948	Sphenodon_punctatus
ENSPSIG00000005672	-	64	51.961	ENSSPUG00000010016	-	93	49.091	Sphenodon_punctatus
ENSPSIG00000005672	-	61	50.909	ENSSPAG00000021653	-	79	50.909	Stegastes_partitus
ENSPSIG00000005672	-	67	55.556	ENSTGUG00000018351	-	99	55.556	Taeniopygia_guttata
ENSPSIG00000005672	-	76	49.077	ENSTGUG00000015210	-	85	49.077	Taeniopygia_guttata
ENSPSIG00000005672	-	94	42.029	ENSTRUG00000022066	-	93	41.624	Takifugu_rubripes
ENSPSIG00000005672	-	71	46.305	ENSXETG00000031192	-	100	46.753	Xenopus_tropicalis
ENSPSIG00000005672	-	77	53.138	ENSXCOG00000006553	-	95	51.584	Xiphophorus_couchianus
ENSPSIG00000005672	-	65	46.009	ENSXMAG00000026680	-	83	46.009	Xiphophorus_maculatus