EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000005959 (Gene tree)
Gene ID: -
Gene Symbol: ZC3H12C
Alias: -
Full Name: zinc finger CCCH-type containing 12C
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 39963 bases
Position: chrJH207164.1:997169-1037131
Accession: 102457098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000006437	RNase_Zc3h12a	PF11977.8	3.6e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000006474	ZC3H12C-201	2913	XM_006117252	ENSPSIP00000006437	863 (aa)	-	K7FEH7

Gene Model

Click here to download ENSPSIG00000005959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000005959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000005959	ZC3H12C	96	54.609	ENSPSIG00000016853	ZC3H12B	99	54.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000005959	ZC3H12C	100	84.722	ENSG00000149289	ZC3H12C	100	84.259	Homo_sapiens
ENSPSIG00000005959	ZC3H12C	100	84.375	ENSAMEG00000009188	ZC3H12C	96	83.796	Ailuropoda_melanoleuca
ENSPSIG00000005959	ZC3H12C	73	91.918	ENSAPLG00000002854	ZC3H12C	100	91.918	Anas_platyrhynchos
ENSPSIG00000005959	ZC3H12C	100	87.963	ENSACAG00000001031	ZC3H12C	94	87.963	Anolis_carolinensis
ENSPSIG00000005959	ZC3H12C	100	85.648	ENSANAG00000026999	ZC3H12C	96	85.069	Aotus_nancymaae
ENSPSIG00000005959	ZC3H12C	100	84.277	ENSBTAG00000008732	ZC3H12C	96	83.699	Bos_taurus
ENSPSIG00000005959	ZC3H12C	100	84.722	ENSCJAG00000010319	ZC3H12C	97	83.681	Callithrix_jacchus
ENSPSIG00000005959	ZC3H12C	100	81.503	ENSCAFG00000014297	ZC3H12C	96	80.925	Canis_familiaris
ENSPSIG00000005959	ZC3H12C	100	81.503	ENSCAFG00020006999	ZC3H12C	96	80.925	Canis_lupus_dingo
ENSPSIG00000005959	ZC3H12C	100	84.162	ENSCHIG00000021221	ZC3H12C	96	83.584	Capra_hircus
ENSPSIG00000005959	ZC3H12C	93	83.906	ENSTSYG00000005412	ZC3H12C	96	83.438	Carlito_syrichta
ENSPSIG00000005959	ZC3H12C	100	82.986	ENSCAPG00000011610	ZC3H12C	97	82.407	Cavia_aperea
ENSPSIG00000005959	ZC3H12C	100	82.870	ENSCPOG00000032962	ZC3H12C	96	82.292	Cavia_porcellus
ENSPSIG00000005959	ZC3H12C	100	85.417	ENSCCAG00000022395	ZC3H12C	100	84.838	Cebus_capucinus
ENSPSIG00000005959	ZC3H12C	100	84.838	ENSCATG00000041641	ZC3H12C	96	84.259	Cercocebus_atys
ENSPSIG00000005959	ZC3H12C	100	84.491	ENSCLAG00000012577	ZC3H12C	100	83.912	Chinchilla_lanigera
ENSPSIG00000005959	ZC3H12C	100	84.491	ENSCSAG00000002945	ZC3H12C	96	83.912	Chlorocebus_sabaeus
ENSPSIG00000005959	ZC3H12C	100	79.398	ENSCHOG00000013202	-	97	79.398	Choloepus_hoffmanni
ENSPSIG00000005959	ZC3H12C	100	95.370	ENSCPBG00000021043	ZC3H12C	100	95.370	Chrysemys_picta_bellii
ENSPSIG00000005959	ZC3H12C	100	84.606	ENSCANG00000040994	ZC3H12C	96	84.028	Colobus_angolensis_palliatus
ENSPSIG00000005959	ZC3H12C	100	83.333	ENSCGRG00001013672	Zc3h12c	96	83.565	Cricetulus_griseus_chok1gshd
ENSPSIG00000005959	ZC3H12C	100	83.333	ENSCGRG00000001308	Zc3h12c	94	83.565	Cricetulus_griseus_crigri
ENSPSIG00000005959	ZC3H12C	100	83.449	ENSDNOG00000013040	ZC3H12C	96	82.986	Dasypus_novemcinctus
ENSPSIG00000005959	ZC3H12C	100	82.292	ENSDORG00000009134	Zc3h12c	97	81.713	Dipodomys_ordii
ENSPSIG00000005959	ZC3H12C	73	88.431	ENSETEG00000008027	ZC3H12C	100	88.431	Echinops_telfairi
ENSPSIG00000005959	ZC3H12C	100	85.995	ENSEASG00005010098	ZC3H12C	96	85.417	Equus_asinus_asinus
ENSPSIG00000005959	ZC3H12C	100	86.111	ENSECAG00000000462	ZC3H12C	100	85.532	Equus_caballus
ENSPSIG00000005959	ZC3H12C	67	84.402	ENSEEUG00000005709	-	100	84.402	Erinaceus_europaeus
ENSPSIG00000005959	ZC3H12C	100	82.755	ENSFCAG00000010665	ZC3H12C	96	82.176	Felis_catus
ENSPSIG00000005959	ZC3H12C	100	89.249	ENSFALG00000008776	ZC3H12C	96	89.017	Ficedula_albicollis
ENSPSIG00000005959	ZC3H12C	100	84.954	ENSFDAG00000017997	ZC3H12C	100	84.491	Fukomys_damarensis
ENSPSIG00000005959	ZC3H12C	100	90.405	ENSGALG00000017154	ZC3H12C	100	90.173	Gallus_gallus
ENSPSIG00000005959	ZC3H12C	94	94.485	ENSGAGG00000024154	ZC3H12C	83	94.485	Gopherus_agassizii
ENSPSIG00000005959	ZC3H12C	100	84.722	ENSGGOG00000010117	ZC3H12C	96	84.144	Gorilla_gorilla
ENSPSIG00000005959	ZC3H12C	100	84.954	ENSHGLG00000019021	ZC3H12C	96	84.375	Heterocephalus_glaber_female
ENSPSIG00000005959	ZC3H12C	100	84.954	ENSHGLG00100007295	ZC3H12C	96	84.375	Heterocephalus_glaber_male
ENSPSIG00000005959	ZC3H12C	100	85.995	ENSSTOG00000022143	ZC3H12C	97	85.417	Ictidomys_tridecemlineatus
ENSPSIG00000005959	ZC3H12C	100	85.301	ENSJJAG00000001147	Zc3h12c	97	84.722	Jaculus_jaculus
ENSPSIG00000005959	ZC3H12C	100	75.973	ENSLACG00000009305	ZC3H12C	97	75.973	Latimeria_chalumnae
ENSPSIG00000005959	ZC3H12C	73	89.100	ENSLAFG00000016296	ZC3H12C	100	89.100	Loxodonta_africana
ENSPSIG00000005959	ZC3H12C	100	84.838	ENSMFAG00000042068	ZC3H12C	96	84.259	Macaca_fascicularis
ENSPSIG00000005959	ZC3H12C	100	84.838	ENSMMUG00000048435	ZC3H12C	96	84.259	Macaca_mulatta
ENSPSIG00000005959	ZC3H12C	100	84.838	ENSMNEG00000032663	ZC3H12C	100	84.259	Macaca_nemestrina
ENSPSIG00000005959	ZC3H12C	100	84.838	ENSMLEG00000032083	ZC3H12C	96	84.259	Mandrillus_leucophaeus
ENSPSIG00000005959	ZC3H12C	100	89.595	ENSMGAG00000015143	ZC3H12C	97	89.364	Meleagris_gallopavo
ENSPSIG00000005959	ZC3H12C	100	82.543	ENSMAUG00000020412	Zc3h12c	97	82.775	Mesocricetus_auratus
ENSPSIG00000005959	ZC3H12C	100	85.764	ENSMICG00000011455	ZC3H12C	100	85.185	Microcebus_murinus
ENSPSIG00000005959	ZC3H12C	100	84.028	ENSMOCG00000020090	Zc3h12c	96	83.449	Microtus_ochrogaster
ENSPSIG00000005959	ZC3H12C	100	87.269	ENSMODG00000014555	ZC3H12C	100	87.269	Monodelphis_domestica
ENSPSIG00000005959	ZC3H12C	100	83.796	MGP_CAROLIEiJ_G0032210	Zc3h12c	96	83.449	Mus_caroli
ENSPSIG00000005959	ZC3H12C	100	83.565	ENSMUSG00000035164	Zc3h12c	96	83.102	Mus_musculus
ENSPSIG00000005959	ZC3H12C	100	82.523	MGP_PahariEiJ_G0015078	Zc3h12c	96	82.060	Mus_pahari
ENSPSIG00000005959	ZC3H12C	100	83.333	MGP_SPRETEiJ_G0033350	Zc3h12c	96	82.870	Mus_spretus
ENSPSIG00000005959	ZC3H12C	100	80.440	ENSMPUG00000005888	ZC3H12C	94	80.440	Mustela_putorius_furo
ENSPSIG00000005959	ZC3H12C	100	83.912	ENSMLUG00000017189	ZC3H12C	97	83.218	Myotis_lucifugus
ENSPSIG00000005959	ZC3H12C	100	84.375	ENSNGAG00000023957	Zc3h12c	97	84.606	Nannospalax_galili
ENSPSIG00000005959	ZC3H12C	100	85.185	ENSNLEG00000029829	ZC3H12C	96	84.606	Nomascus_leucogenys
ENSPSIG00000005959	ZC3H12C	100	84.144	ENSMEUG00000015398	ZC3H12C	97	84.144	Notamacropus_eugenii
ENSPSIG00000005959	ZC3H12C	73	76.387	ENSOPRG00000003370	-	95	76.387	Ochotona_princeps
ENSPSIG00000005959	ZC3H12C	100	82.292	ENSODEG00000011026	ZC3H12C	97	81.829	Octodon_degus
ENSPSIG00000005959	ZC3H12C	73	83.072	ENSOANG00000006242	-	99	83.072	Ornithorhynchus_anatinus
ENSPSIG00000005959	ZC3H12C	100	84.491	ENSOCUG00000005283	ZC3H12C	97	84.722	Oryctolagus_cuniculus
ENSPSIG00000005959	ZC3H12C	100	84.624	ENSOGAG00000013223	ZC3H12C	96	84.046	Otolemur_garnettii
ENSPSIG00000005959	ZC3H12C	100	79.398	ENSOARG00000012999	ZC3H12C	97	82.940	Ovis_aries
ENSPSIG00000005959	ZC3H12C	100	84.954	ENSPPAG00000041914	ZC3H12C	96	84.375	Pan_paniscus
ENSPSIG00000005959	ZC3H12C	100	82.523	ENSPPRG00000006582	ZC3H12C	96	81.944	Panthera_pardus
ENSPSIG00000005959	ZC3H12C	87	80.476	ENSPTIG00000009995	ZC3H12C	96	79.683	Panthera_tigris_altaica
ENSPSIG00000005959	ZC3H12C	100	84.954	ENSPTRG00000050494	ZC3H12C	96	84.375	Pan_troglodytes
ENSPSIG00000005959	ZC3H12C	100	84.838	ENSPANG00000023930	ZC3H12C	96	84.259	Papio_anubis
ENSPSIG00000005959	ZC3H12C	86	84.946	ENSPEMG00000008502	Zc3h12c	94	84.946	Peromyscus_maniculatus_bairdii
ENSPSIG00000005959	ZC3H12C	100	86.690	ENSPCIG00000022169	ZC3H12C	100	86.690	Phascolarctos_cinereus
ENSPSIG00000005959	ZC3H12C	100	84.606	ENSPPYG00000003851	ZC3H12C	100	84.028	Pongo_abelii
ENSPSIG00000005959	ZC3H12C	67	88.754	ENSPCAG00000015682	ZC3H12C	99	88.754	Procavia_capensis
ENSPSIG00000005959	ZC3H12C	100	86.227	ENSPCOG00000024737	ZC3H12C	96	85.648	Propithecus_coquereli
ENSPSIG00000005959	ZC3H12C	100	83.353	ENSPVAG00000014329	ZC3H12C	97	82.890	Pteropus_vampyrus
ENSPSIG00000005959	ZC3H12C	100	83.912	ENSRNOG00000012470	Zc3h12c	96	83.449	Rattus_norvegicus
ENSPSIG00000005959	ZC3H12C	100	84.838	ENSRBIG00000040441	ZC3H12C	100	84.259	Rhinopithecus_bieti
ENSPSIG00000005959	ZC3H12C	100	84.838	ENSRROG00000004335	ZC3H12C	96	84.259	Rhinopithecus_roxellana
ENSPSIG00000005959	ZC3H12C	100	85.764	ENSSBOG00000025582	ZC3H12C	100	85.185	Saimiri_boliviensis_boliviensis
ENSPSIG00000005959	ZC3H12C	100	86.921	ENSSHAG00000005597	ZC3H12C	100	86.921	Sarcophilus_harrisii
ENSPSIG00000005959	ZC3H12C	73	89.557	ENSSARG00000003433	ZC3H12C	99	89.557	Sorex_araneus
ENSPSIG00000005959	ZC3H12C	100	91.435	ENSSPUG00000001832	ZC3H12C	96	91.435	Sphenodon_punctatus
ENSPSIG00000005959	ZC3H12C	100	84.855	ENSSSCG00000015014	ZC3H12C	100	85.087	Sus_scrofa
ENSPSIG00000005959	ZC3H12C	75	91.049	ENSTGUG00000011244	ZC3H12C	100	91.049	Taeniopygia_guttata
ENSPSIG00000005959	ZC3H12C	100	85.648	ENSTTRG00000005096	ZC3H12C	97	85.069	Tursiops_truncatus
ENSPSIG00000005959	ZC3H12C	100	84.954	ENSUAMG00000006051	ZC3H12C	97	84.375	Ursus_americanus
ENSPSIG00000005959	ZC3H12C	100	84.954	ENSUMAG00000007283	ZC3H12C	96	84.375	Ursus_maritimus
ENSPSIG00000005959	ZC3H12C	88	85.578	ENSVPAG00000003110	ZC3H12C	86	85.578	Vicugna_pacos
ENSPSIG00000005959	ZC3H12C	100	72.696	ENSXETG00000033837	ZC3H12C	97	72.696	Xenopus_tropicalis