EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000006048 (Gene tree)
Gene ID: 102459155
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 13296 bases
Position: chrJH208491.1:265073-278368
Accession: 102459155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000006535	RRM_1	PF00076.22	4.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000006572	RNPS1-201	3705	XM_006121720	ENSPSIP00000006535	307 (aa)	XP_006121782	K7FES5

Gene Model

Click here to download ENSPSIG00000006048's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03013	RNA transport	KEGG
pss03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006048's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006048	RNPS1	86	92.776	ENSG00000205937	RNPS1	100	92.000	Homo_sapiens
ENSPSIG00000006048	RNPS1	78	68.619	ENSAPOG00000014649	-	84	69.583	Acanthochromis_polyacanthus
ENSPSIG00000006048	RNPS1	86	92.776	ENSAMEG00000017861	RNPS1	86	92.776	Ailuropoda_melanoleuca
ENSPSIG00000006048	RNPS1	70	65.116	ENSACIG00000014367	-	76	66.512	Amphilophus_citrinellus
ENSPSIG00000006048	RNPS1	78	71.967	ENSAOCG00000002404	RNPS1	81	72.489	Amphiprion_ocellaris
ENSPSIG00000006048	RNPS1	79	67.769	ENSAPEG00000019263	-	81	68.724	Amphiprion_percula
ENSPSIG00000006048	RNPS1	78	73.222	ENSATEG00000024267	RNPS1	84	73.750	Anabas_testudineus
ENSPSIG00000006048	RNPS1	95	69.178	ENSAPLG00000006231	RNPS1	100	69.178	Anas_platyrhynchos
ENSPSIG00000006048	RNPS1	76	90.987	ENSACAG00000004088	RNPS1	94	90.987	Anolis_carolinensis
ENSPSIG00000006048	RNPS1	73	91.071	ENSANAG00000029802	-	88	89.565	Aotus_nancymaae
ENSPSIG00000006048	RNPS1	86	92.395	ENSANAG00000028802	RNPS1	85	93.724	Aotus_nancymaae
ENSPSIG00000006048	RNPS1	84	60.385	ENSACLG00000021537	-	92	68.110	Astatotilapia_calliptera
ENSPSIG00000006048	RNPS1	78	76.250	ENSAMXG00000006330	-	81	69.608	Astyanax_mexicanus
ENSPSIG00000006048	RNPS1	81	92.339	ENSBTAG00000009969	RNPS1	81	92.339	Bos_taurus
ENSPSIG00000006048	RNPS1	86	92.776	ENSCJAG00000014969	RNPS1	100	89.496	Callithrix_jacchus
ENSPSIG00000006048	RNPS1	86	92.776	ENSCAFG00000019397	RNPS1	86	92.776	Canis_familiaris
ENSPSIG00000006048	RNPS1	86	92.776	ENSCAFG00020026159	RNPS1	97	92.000	Canis_lupus_dingo
ENSPSIG00000006048	RNPS1	66	93.103	ENSCHIG00000014621	-	69	92.647	Capra_hircus
ENSPSIG00000006048	RNPS1	79	88.382	ENSTSYG00000031848	-	98	88.333	Carlito_syrichta
ENSPSIG00000006048	RNPS1	86	92.776	ENSTSYG00000001629	RNPS1	85	94.142	Carlito_syrichta
ENSPSIG00000006048	RNPS1	86	92.776	ENSCAPG00000007731	RNPS1	86	92.776	Cavia_aperea
ENSPSIG00000006048	RNPS1	86	92.776	ENSCPOG00000002066	RNPS1	85	94.142	Cavia_porcellus
ENSPSIG00000006048	RNPS1	86	92.395	ENSCCAG00000034480	RNPS1	85	93.724	Cebus_capucinus
ENSPSIG00000006048	RNPS1	86	92.776	ENSCATG00000013756	RNPS1	98	88.285	Cercocebus_atys
ENSPSIG00000006048	RNPS1	93	84.669	ENSCATG00000042361	-	87	87.023	Cercocebus_atys
ENSPSIG00000006048	RNPS1	86	92.776	ENSCLAG00000015546	RNPS1	85	94.142	Chinchilla_lanigera
ENSPSIG00000006048	RNPS1	89	91.606	ENSCSAG00000005219	-	80	92.887	Chlorocebus_sabaeus
ENSPSIG00000006048	RNPS1	86	90.875	ENSCHOG00000004866	RNPS1	86	90.875	Choloepus_hoffmanni
ENSPSIG00000006048	RNPS1	86	92.776	ENSCANG00000041307	RNPS1	94	92.070	Colobus_angolensis_palliatus
ENSPSIG00000006048	RNPS1	66	80.676	ENSCANG00000030189	-	78	61.353	Colobus_angolensis_palliatus
ENSPSIG00000006048	RNPS1	86	92.776	ENSCGRG00001020431	Rnps1	85	94.142	Cricetulus_griseus_chok1gshd
ENSPSIG00000006048	RNPS1	79	92.531	ENSCGRG00000014021	Rnps1	79	92.500	Cricetulus_griseus_crigri
ENSPSIG00000006048	RNPS1	84	67.557	ENSCSEG00000000402	RNPS1	85	67.557	Cynoglossus_semilaevis
ENSPSIG00000006048	RNPS1	79	69.136	ENSCSEG00000015997	RNPS1	83	70.000	Cynoglossus_semilaevis
ENSPSIG00000006048	RNPS1	86	92.776	ENSDNOG00000016081	RNPS1	86	92.776	Dasypus_novemcinctus
ENSPSIG00000006048	RNPS1	65	67.337	ENSDNOG00000038751	-	99	67.337	Dasypus_novemcinctus
ENSPSIG00000006048	RNPS1	86	92.015	ENSDORG00000001755	Rnps1	85	93.305	Dipodomys_ordii
ENSPSIG00000006048	RNPS1	86	92.776	ENSEASG00005004862	RNPS1	86	92.776	Equus_asinus_asinus
ENSPSIG00000006048	RNPS1	79	87.654	ENSECAG00000023288	RNPS1	83	90.476	Equus_caballus
ENSPSIG00000006048	RNPS1	70	71.163	ENSELUG00000015003	RNPS1	75	65.581	Esox_lucius
ENSPSIG00000006048	RNPS1	86	92.395	ENSFCAG00000007690	RNPS1	85	93.724	Felis_catus
ENSPSIG00000006048	RNPS1	93	97.887	ENSFALG00000004868	RNPS1	100	97.887	Ficedula_albicollis
ENSPSIG00000006048	RNPS1	86	92.015	ENSFDAG00000003386	RNPS1	85	93.305	Fukomys_damarensis
ENSPSIG00000006048	RNPS1	71	68.807	ENSFHEG00000011705	RNPS1	75	69.907	Fundulus_heteroclitus
ENSPSIG00000006048	RNPS1	92	97.880	ENSGALG00000009288	RNPS1	99	97.880	Gallus_gallus
ENSPSIG00000006048	RNPS1	100	99.023	ENSGAGG00000010452	RNPS1	100	99.023	Gopherus_agassizii
ENSPSIG00000006048	RNPS1	67	91.748	ENSGGOG00000026421	-	79	91.748	Gorilla_gorilla
ENSPSIG00000006048	RNPS1	86	92.776	ENSGGOG00000014275	RNPS1	96	91.667	Gorilla_gorilla
ENSPSIG00000006048	RNPS1	78	62.656	ENSHBUG00000017337	-	84	70.124	Haplochromis_burtoni
ENSPSIG00000006048	RNPS1	78	90.000	ENSHGLG00000006292	-	94	90.000	Heterocephalus_glaber_female
ENSPSIG00000006048	RNPS1	86	92.776	ENSHGLG00000013957	RNPS1	85	94.142	Heterocephalus_glaber_female
ENSPSIG00000006048	RNPS1	66	86.275	ENSHGLG00100011610	-	83	86.275	Heterocephalus_glaber_male
ENSPSIG00000006048	RNPS1	84	88.803	ENSHGLG00100015267	-	81	89.286	Heterocephalus_glaber_male
ENSPSIG00000006048	RNPS1	79	77.551	ENSHGLG00100017879	-	80	65.289	Heterocephalus_glaber_male
ENSPSIG00000006048	RNPS1	86	92.776	ENSHGLG00100003539	RNPS1	85	94.142	Heterocephalus_glaber_male
ENSPSIG00000006048	RNPS1	86	68.061	ENSSTOG00000013200	RNPS1	50	94.309	Ictidomys_tridecemlineatus
ENSPSIG00000006048	RNPS1	86	92.395	ENSJJAG00000015576	-	85	93.724	Jaculus_jaculus
ENSPSIG00000006048	RNPS1	78	89.121	ENSLACG00000007112	RNPS1	84	89.121	Latimeria_chalumnae
ENSPSIG00000006048	RNPS1	78	69.456	ENSLOCG00000001758	RNPS1	84	85.774	Lepisosteus_oculatus
ENSPSIG00000006048	RNPS1	86	92.776	ENSMFAG00000042142	RNPS1	85	94.142	Macaca_fascicularis
ENSPSIG00000006048	RNPS1	66	93.564	ENSMMUG00000019238	-	80	94.355	Macaca_mulatta
ENSPSIG00000006048	RNPS1	87	88.060	ENSMMUG00000041726	-	92	87.833	Macaca_mulatta
ENSPSIG00000006048	RNPS1	87	88.433	ENSMNEG00000024827	-	92	88.213	Macaca_nemestrina
ENSPSIG00000006048	RNPS1	86	92.776	ENSMLEG00000036928	RNPS1	85	94.142	Mandrillus_leucophaeus
ENSPSIG00000006048	RNPS1	67	87.379	ENSMLEG00000040232	-	80	87.379	Mandrillus_leucophaeus
ENSPSIG00000006048	RNPS1	79	71.311	ENSMAMG00000021148	-	88	66.284	Mastacembelus_armatus
ENSPSIG00000006048	RNPS1	78	70.711	ENSMAMG00000021609	-	84	71.250	Mastacembelus_armatus
ENSPSIG00000006048	RNPS1	79	95.436	ENSMGAG00000010042	RNPS1	98	96.186	Meleagris_gallopavo
ENSPSIG00000006048	RNPS1	86	92.395	ENSMICG00000031543	RNPS1	85	93.724	Microcebus_murinus
ENSPSIG00000006048	RNPS1	86	92.776	ENSMOCG00000003429	Rnps1	85	94.142	Microtus_ochrogaster
ENSPSIG00000006048	RNPS1	70	67.442	ENSMMOG00000010863	RNPS1	75	66.047	Mola_mola
ENSPSIG00000006048	RNPS1	86	77.273	ENSMODG00000015891	RNPS1	86	79.167	Monodelphis_domestica
ENSPSIG00000006048	RNPS1	86	92.776	ENSMUSG00000034681	Rnps1	85	94.142	Mus_musculus
ENSPSIG00000006048	RNPS1	86	92.015	MGP_PahariEiJ_G0023498	Rnps1	85	94.142	Mus_pahari
ENSPSIG00000006048	RNPS1	86	92.776	MGP_SPRETEiJ_G0022092	Rnps1	85	94.142	Mus_spretus
ENSPSIG00000006048	RNPS1	86	92.776	ENSMLUG00000016808	RNPS1	86	92.776	Myotis_lucifugus
ENSPSIG00000006048	RNPS1	86	92.395	ENSNGAG00000023702	Rnps1	85	94.142	Nannospalax_galili
ENSPSIG00000006048	RNPS1	80	61.538	ENSNBRG00000014540	-	92	66.797	Neolamprologus_brichardi
ENSPSIG00000006048	RNPS1	70	66.977	ENSNBRG00000023437	RNPS1	75	65.581	Neolamprologus_brichardi
ENSPSIG00000006048	RNPS1	89	91.176	ENSNLEG00000009243	RNPS1	98	92.181	Nomascus_leucogenys
ENSPSIG00000006048	RNPS1	86	92.776	ENSMEUG00000008882	RNPS1	86	92.776	Notamacropus_eugenii
ENSPSIG00000006048	RNPS1	78	89.167	ENSOPRG00000016422	RNPS1	79	89.167	Ochotona_princeps
ENSPSIG00000006048	RNPS1	54	60.241	ENSODEG00000002513	-	54	59.677	Octodon_degus
ENSPSIG00000006048	RNPS1	52	65.625	ENSODEG00000017258	-	51	63.710	Octodon_degus
ENSPSIG00000006048	RNPS1	78	68.465	ENSORLG00015011183	RNPS1	74	69.710	Oryzias_latipes_hsok
ENSPSIG00000006048	RNPS1	86	92.776	ENSOARG00000018056	-	73	92.776	Ovis_aries
ENSPSIG00000006048	RNPS1	74	91.667	ENSPPAG00000037836	-	96	91.667	Pan_paniscus
ENSPSIG00000006048	RNPS1	88	88.519	ENSPPAG00000011845	RNPS1	90	87.448	Pan_paniscus
ENSPSIG00000006048	RNPS1	86	92.395	ENSPPRG00000011255	RNPS1	85	93.724	Panthera_pardus
ENSPSIG00000006048	RNPS1	62	82.781	ENSPTIG00000015643	RNPS1	85	94.355	Panthera_tigris_altaica
ENSPSIG00000006048	RNPS1	86	92.776	ENSPTRG00000031310	RNPS1	85	94.142	Pan_troglodytes
ENSPSIG00000006048	RNPS1	74	90.749	ENSPTRG00000046326	-	91	86.611	Pan_troglodytes
ENSPSIG00000006048	RNPS1	66	68.627	ENSPANG00000033576	-	75	69.154	Papio_anubis
ENSPSIG00000006048	RNPS1	86	92.776	ENSPANG00000015748	RNPS1	85	94.142	Papio_anubis
ENSPSIG00000006048	RNPS1	78	80.833	ENSPKIG00000023465	RNPS1	84	80.833	Paramormyrops_kingsleyae
ENSPSIG00000006048	RNPS1	86	92.776	ENSPEMG00000012797	Rnps1	85	94.142	Peromyscus_maniculatus_bairdii
ENSPSIG00000006048	RNPS1	60	84.106	ENSPCIG00000016114	-	80	92.742	Phascolarctos_cinereus
ENSPSIG00000006048	RNPS1	86	92.776	ENSPCIG00000025012	RNPS1	86	92.776	Phascolarctos_cinereus
ENSPSIG00000006048	RNPS1	86	90.114	ENSPCAG00000004514	RNPS1	86	90.114	Procavia_capensis
ENSPSIG00000006048	RNPS1	86	92.395	ENSPCOG00000005478	RNPS1	85	93.724	Propithecus_coquereli
ENSPSIG00000006048	RNPS1	86	92.395	ENSPVAG00000005105	RNPS1	86	92.395	Pteropus_vampyrus
ENSPSIG00000006048	RNPS1	78	73.640	ENSPNAG00000025479	RNPS1	84	69.874	Pygocentrus_nattereri
ENSPSIG00000006048	RNPS1	86	92.776	ENSRNOG00000008703	Rnps1	86	92.776	Rattus_norvegicus
ENSPSIG00000006048	RNPS1	86	89.139	ENSRBIG00000038965	-	96	89.139	Rhinopithecus_bieti
ENSPSIG00000006048	RNPS1	86	92.776	ENSRROG00000041252	RNPS1	94	92.070	Rhinopithecus_roxellana
ENSPSIG00000006048	RNPS1	86	92.776	ENSSBOG00000027927	RNPS1	85	94.142	Saimiri_boliviensis_boliviensis
ENSPSIG00000006048	RNPS1	86	92.776	ENSSHAG00000016951	RNPS1	86	92.776	Sarcophilus_harrisii
ENSPSIG00000006048	RNPS1	79	78.512	ENSSFOG00015019341	-	81	67.050	Scleropages_formosus
ENSPSIG00000006048	RNPS1	78	72.500	ENSSFOG00015022746	RNPS1	87	66.527	Scleropages_formosus
ENSPSIG00000006048	RNPS1	78	71.548	ENSSDUG00000011453	RNPS1	84	72.083	Seriola_dumerili
ENSPSIG00000006048	RNPS1	84	65.900	ENSSDUG00000006433	-	85	66.412	Seriola_dumerili
ENSPSIG00000006048	RNPS1	71	62.500	ENSSLDG00000021341	RNPS1	76	68.137	Seriola_lalandi_dorsalis
ENSPSIG00000006048	RNPS1	78	89.583	ENSSARG00000001577	RNPS1	86	89.583	Sorex_araneus
ENSPSIG00000006048	RNPS1	100	97.720	ENSSPUG00000016588	RNPS1	100	97.720	Sphenodon_punctatus
ENSPSIG00000006048	RNPS1	86	93.156	ENSSSCG00000008048	RNPS1	86	93.156	Sus_scrofa
ENSPSIG00000006048	RNPS1	93	97.535	ENSTGUG00000003237	RNPS1	100	97.535	Taeniopygia_guttata
ENSPSIG00000006048	RNPS1	78	72.083	ENSTRUG00000008602	RNPS1	84	72.083	Takifugu_rubripes
ENSPSIG00000006048	RNPS1	79	72.840	ENSTNIG00000009753	RNPS1	84	72.840	Tetraodon_nigroviridis
ENSPSIG00000006048	RNPS1	89	93.015	ENSTBEG00000009098	RNPS1	97	92.776	Tupaia_belangeri
ENSPSIG00000006048	RNPS1	86	92.776	ENSTTRG00000008220	RNPS1	86	92.776	Tursiops_truncatus
ENSPSIG00000006048	RNPS1	86	92.776	ENSUAMG00000004462	RNPS1	96	92.776	Ursus_americanus
ENSPSIG00000006048	RNPS1	86	92.776	ENSUMAG00000022327	RNPS1	86	92.776	Ursus_maritimus
ENSPSIG00000006048	RNPS1	86	92.776	ENSVVUG00000009244	RNPS1	86	92.776	Vulpes_vulpes
ENSPSIG00000006048	RNPS1	76	72.881	ENSXETG00000024439	rnps1	73	73.451	Xenopus_tropicalis