EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000006255 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH8
Alias: -
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 80169 bases
Position: chrJH205680.1:13124-93292
Accession: 102449974
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000006788	zf-C2H2_jaz	PF12171.8	1.9e-06	1	1
ENSPSIP00000006788	G-patch	PF01585.23	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000006826	GPATCH8-201	4389	XM_006112654	ENSPSIP00000006788	1462 (aa)	-	K7FFH8

Gene Model

Click here to download ENSPSIG00000006255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000006255	GPATCH8	57	40.340	ENSPSIG00000013424	ZNF804B	66	39.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006255	GPATCH8	56	62.110	ENSG00000186566	GPATCH8	83	98.361	Homo_sapiens
ENSPSIG00000006255	GPATCH8	56	59.858	ENSTSYG00000033153	GPATCH8	99	63.013	Carlito_syrichta
ENSPSIG00000006255	GPATCH8	99	60.719	ENSCAPG00000004450	GPATCH8	53	57.439	Cavia_aperea
ENSPSIG00000006255	GPATCH8	99	61.070	ENSCPOG00000039068	GPATCH8	54	58.180	Cavia_porcellus
ENSPSIG00000006255	GPATCH8	99	83.778	ENSCPBG00000008955	GPATCH8	99	79.172	Chrysemys_picta_bellii
ENSPSIG00000006255	GPATCH8	99	64.563	ENSCGRG00001020210	Gpatch8	99	59.948	Cricetulus_griseus_chok1gshd
ENSPSIG00000006255	GPATCH8	99	64.563	ENSCGRG00000017090	Gpatch8	99	59.948	Cricetulus_griseus_crigri
ENSPSIG00000006255	GPATCH8	70	53.502	ENSDARG00000059768	gpatch8	50	66.957	Danio_rerio
ENSPSIG00000006255	GPATCH8	99	67.675	ENSGALG00000041556	GPATCH8	84	63.754	Gallus_gallus
ENSPSIG00000006255	GPATCH8	56	58.273	ENSGGOG00000013860	GPATCH8	99	61.726	Gorilla_gorilla
ENSPSIG00000006255	GPATCH8	99	60.674	ENSHGLG00000017687	GPATCH8	99	56.415	Heterocephalus_glaber_female
ENSPSIG00000006255	GPATCH8	75	67.608	ENSHGLG00100010738	GPATCH8	96	67.608	Heterocephalus_glaber_male
ENSPSIG00000006255	GPATCH8	56	54.237	ENSIPUG00000015431	gpatch8	50	64.348	Ictalurus_punctatus
ENSPSIG00000006255	GPATCH8	74	61.893	ENSLAFG00000032250	GPATCH8	99	63.276	Loxodonta_africana
ENSPSIG00000006255	GPATCH8	92	91.892	ENSMLUG00000013840	GPATCH8	96	92.157	Myotis_lucifugus
ENSPSIG00000006255	GPATCH8	79	62.638	ENSMEUG00000011799	GPATCH8	99	63.745	Notamacropus_eugenii
ENSPSIG00000006255	GPATCH8	99	59.142	ENSOPRG00000008816	GPATCH8	99	57.426	Ochotona_princeps
ENSPSIG00000006255	GPATCH8	56	61.091	ENSOARG00000008370	GPATCH8	99	60.812	Ovis_aries
ENSPSIG00000006255	GPATCH8	56	61.733	ENSPTIG00000020001	GPATCH8	99	65.174	Panthera_tigris_altaica
ENSPSIG00000006255	GPATCH8	76	92.241	ENSPCAG00000004441	GPATCH8	71	94.690	Procavia_capensis
ENSPSIG00000006255	GPATCH8	52	74.868	ENSSPUG00000011251	GPATCH8	100	70.787	Sphenodon_punctatus
ENSPSIG00000006255	GPATCH8	73	68.881	ENSTBEG00000009486	GPATCH8	76	93.137	Tupaia_belangeri
ENSPSIG00000006255	GPATCH8	93	63.017	ENSVPAG00000006937	GPATCH8	98	59.559	Vicugna_pacos