EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000006476 (Gene tree)
Gene ID: 102457101
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 18324 bases
Position: chrJH207292.1:2323689-2342012
Accession: 102457101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000007194	SRP54	PF00448.22	7.5e-78	1	1
ENSPSIP00000007194	SRP54_N	PF02881.19	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000007235	SRP54-201	3651	XM_006117682	ENSPSIP00000007194	504 (aa)	XP_006117744	K7FGN4

Gene Model

Click here to download ENSPSIG00000006476's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006476	SRP54	100	99.008	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSPSIG00000006476	SRP54	100	95.635	ENSAPOG00000011314	srp54	100	95.635	Acanthochromis_polyacanthus
ENSPSIG00000006476	SRP54	100	99.008	ENSAMEG00000015544	SRP54	100	99.008	Ailuropoda_melanoleuca
ENSPSIG00000006476	SRP54	89	94.209	ENSACIG00000022831	srp54	97	94.209	Amphilophus_citrinellus
ENSPSIG00000006476	SRP54	100	95.635	ENSAOCG00000019401	srp54	100	95.635	Amphiprion_ocellaris
ENSPSIG00000006476	SRP54	100	95.635	ENSAPEG00000001977	srp54	100	95.635	Amphiprion_percula
ENSPSIG00000006476	SRP54	100	96.032	ENSATEG00000013877	srp54	100	96.032	Anabas_testudineus
ENSPSIG00000006476	SRP54	94	99.367	ENSAPLG00000010125	SRP54	95	99.367	Anas_platyrhynchos
ENSPSIG00000006476	SRP54	86	96.313	ENSACAG00000010631	-	100	96.313	Anolis_carolinensis
ENSPSIG00000006476	SRP54	100	99.206	ENSACAG00000002103	-	100	99.206	Anolis_carolinensis
ENSPSIG00000006476	SRP54	65	82.175	ENSACAG00000001124	-	100	82.175	Anolis_carolinensis
ENSPSIG00000006476	SRP54	100	99.008	ENSANAG00000022133	SRP54	100	99.008	Aotus_nancymaae
ENSPSIG00000006476	SRP54	100	95.833	ENSACLG00000015866	srp54	100	95.833	Astatotilapia_calliptera
ENSPSIG00000006476	SRP54	100	95.833	ENSAMXG00000032669	SRP54	100	95.833	Astyanax_mexicanus
ENSPSIG00000006476	SRP54	100	99.008	ENSBTAG00000019085	SRP54	100	99.008	Bos_taurus
ENSPSIG00000006476	SRP54	98	71.486	WBGene00009012	F21D5.7	100	71.486	Caenorhabditis_elegans
ENSPSIG00000006476	SRP54	100	99.008	ENSCJAG00000006581	SRP54	100	99.008	Callithrix_jacchus
ENSPSIG00000006476	SRP54	100	99.008	ENSCAFG00000013331	SRP54	100	99.008	Canis_familiaris
ENSPSIG00000006476	SRP54	100	99.008	ENSCAFG00020023427	SRP54	100	99.008	Canis_lupus_dingo
ENSPSIG00000006476	SRP54	100	99.008	ENSCHIG00000026345	SRP54	100	99.008	Capra_hircus
ENSPSIG00000006476	SRP54	94	87.789	ENSTSYG00000035333	-	93	87.789	Carlito_syrichta
ENSPSIG00000006476	SRP54	100	98.810	ENSTSYG00000002680	-	100	98.810	Carlito_syrichta
ENSPSIG00000006476	SRP54	94	63.469	ENSCAPG00000008780	SRP54	100	63.469	Cavia_aperea
ENSPSIG00000006476	SRP54	100	98.611	ENSCPOG00000003691	SRP54	100	98.611	Cavia_porcellus
ENSPSIG00000006476	SRP54	90	98.571	ENSCCAG00000024179	SRP54	100	98.807	Cebus_capucinus
ENSPSIG00000006476	SRP54	100	99.008	ENSCATG00000034083	SRP54	100	99.008	Cercocebus_atys
ENSPSIG00000006476	SRP54	100	99.008	ENSCLAG00000015076	SRP54	100	99.008	Chinchilla_lanigera
ENSPSIG00000006476	SRP54	100	99.008	ENSCSAG00000015575	SRP54	100	99.008	Chlorocebus_sabaeus
ENSPSIG00000006476	SRP54	95	86.902	ENSCHOG00000008986	SRP54	100	86.902	Choloepus_hoffmanni
ENSPSIG00000006476	SRP54	100	99.802	ENSCPBG00000026195	SRP54	100	99.802	Chrysemys_picta_bellii
ENSPSIG00000006476	SRP54	100	81.746	ENSCING00000007380	-	100	81.746	Ciona_intestinalis
ENSPSIG00000006476	SRP54	100	99.008	ENSCANG00000028532	SRP54	100	99.008	Colobus_angolensis_palliatus
ENSPSIG00000006476	SRP54	100	98.611	ENSCGRG00001009525	-	100	98.611	Cricetulus_griseus_chok1gshd
ENSPSIG00000006476	SRP54	76	98.961	ENSCGRG00000009453	-	89	98.961	Cricetulus_griseus_crigri
ENSPSIG00000006476	SRP54	100	94.841	ENSCSEG00000012392	srp54	100	94.841	Cynoglossus_semilaevis
ENSPSIG00000006476	SRP54	100	95.635	ENSCVAG00000010395	srp54	100	95.635	Cyprinodon_variegatus
ENSPSIG00000006476	SRP54	100	95.833	ENSDARG00000098367	srp54	100	95.833	Danio_rerio
ENSPSIG00000006476	SRP54	100	99.008	ENSDNOG00000032525	SRP54	100	99.008	Dasypus_novemcinctus
ENSPSIG00000006476	SRP54	89	84.292	ENSDORG00000005159	-	98	84.292	Dipodomys_ordii
ENSPSIG00000006476	SRP54	96	77.320	FBgn0010747	Srp54k	98	76.908	Drosophila_melanogaster
ENSPSIG00000006476	SRP54	83	57.177	ENSETEG00000012102	-	99	57.177	Echinops_telfairi
ENSPSIG00000006476	SRP54	100	97.817	ENSETEG00000016307	-	100	97.817	Echinops_telfairi
ENSPSIG00000006476	SRP54	100	87.897	ENSEBUG00000009437	-	100	87.897	Eptatretus_burgeri
ENSPSIG00000006476	SRP54	100	99.008	ENSEASG00005002057	SRP54	100	99.008	Equus_asinus_asinus
ENSPSIG00000006476	SRP54	99	98.795	ENSECAG00000018042	SRP54	98	98.795	Equus_caballus
ENSPSIG00000006476	SRP54	100	82.341	ENSEEUG00000001511	SRP54	100	82.341	Erinaceus_europaeus
ENSPSIG00000006476	SRP54	100	95.040	ENSELUG00000003395	srp54	100	95.040	Esox_lucius
ENSPSIG00000006476	SRP54	100	98.810	ENSFCAG00000032033	SRP54	100	98.810	Felis_catus
ENSPSIG00000006476	SRP54	100	99.405	ENSFALG00000005995	SRP54	100	99.405	Ficedula_albicollis
ENSPSIG00000006476	SRP54	100	99.008	ENSFDAG00000016767	SRP54	100	99.008	Fukomys_damarensis
ENSPSIG00000006476	SRP54	100	95.238	ENSFHEG00000004263	srp54	100	95.238	Fundulus_heteroclitus
ENSPSIG00000006476	SRP54	95	89.958	ENSGMOG00000011391	srp54	100	89.958	Gadus_morhua
ENSPSIG00000006476	SRP54	100	99.405	ENSGALG00000023135	SRP54	100	99.405	Gallus_gallus
ENSPSIG00000006476	SRP54	100	95.833	ENSGAFG00000011586	srp54	100	95.833	Gambusia_affinis
ENSPSIG00000006476	SRP54	100	95.238	ENSGACG00000004181	srp54	100	95.238	Gasterosteus_aculeatus
ENSPSIG00000006476	SRP54	100	99.802	ENSGAGG00000014766	SRP54	100	99.802	Gopherus_agassizii
ENSPSIG00000006476	SRP54	100	99.008	ENSGGOG00000002926	SRP54	100	99.008	Gorilla_gorilla
ENSPSIG00000006476	SRP54	100	95.833	ENSHBUG00000005678	srp54	100	95.833	Haplochromis_burtoni
ENSPSIG00000006476	SRP54	100	99.008	ENSHGLG00000002850	SRP54	100	99.008	Heterocephalus_glaber_female
ENSPSIG00000006476	SRP54	100	68.317	ENSHGLG00100007281	-	100	68.317	Heterocephalus_glaber_male
ENSPSIG00000006476	SRP54	100	99.008	ENSHGLG00100005263	SRP54	100	99.008	Heterocephalus_glaber_male
ENSPSIG00000006476	SRP54	100	93.849	ENSHCOG00000021127	srp54	100	93.849	Hippocampus_comes
ENSPSIG00000006476	SRP54	100	95.437	ENSIPUG00000001420	srp54	100	95.437	Ictalurus_punctatus
ENSPSIG00000006476	SRP54	100	99.008	ENSSTOG00000016023	SRP54	100	99.008	Ictidomys_tridecemlineatus
ENSPSIG00000006476	SRP54	87	75.909	ENSJJAG00000016404	-	100	75.909	Jaculus_jaculus
ENSPSIG00000006476	SRP54	100	93.849	ENSJJAG00000013417	-	100	93.849	Jaculus_jaculus
ENSPSIG00000006476	SRP54	100	95.238	ENSKMAG00000007707	srp54	100	95.238	Kryptolebias_marmoratus
ENSPSIG00000006476	SRP54	100	95.635	ENSLBEG00000021122	srp54	100	95.635	Labrus_bergylta
ENSPSIG00000006476	SRP54	100	95.635	ENSLBEG00000018690	srp54	100	95.635	Labrus_bergylta
ENSPSIG00000006476	SRP54	100	95.833	ENSLACG00000017890	SRP54	100	95.833	Latimeria_chalumnae
ENSPSIG00000006476	SRP54	100	96.627	ENSLOCG00000009440	srp54	100	96.627	Lepisosteus_oculatus
ENSPSIG00000006476	SRP54	100	99.008	ENSLAFG00000012007	SRP54	100	99.008	Loxodonta_africana
ENSPSIG00000006476	SRP54	100	99.008	ENSMFAG00000044371	SRP54	100	99.008	Macaca_fascicularis
ENSPSIG00000006476	SRP54	100	99.008	ENSMMUG00000015073	FAM177A1	100	99.008	Macaca_mulatta
ENSPSIG00000006476	SRP54	100	99.008	ENSMNEG00000006947	SRP54	100	99.008	Macaca_nemestrina
ENSPSIG00000006476	SRP54	100	99.008	ENSMLEG00000042251	SRP54	100	99.008	Mandrillus_leucophaeus
ENSPSIG00000006476	SRP54	100	95.833	ENSMAMG00000004803	srp54	100	95.833	Mastacembelus_armatus
ENSPSIG00000006476	SRP54	100	95.833	ENSMZEG00005027528	srp54	100	95.833	Maylandia_zebra
ENSPSIG00000006476	SRP54	100	94.664	ENSMGAG00000012481	SRP54	100	94.664	Meleagris_gallopavo
ENSPSIG00000006476	SRP54	100	98.810	ENSMAUG00000014447	-	100	98.810	Mesocricetus_auratus
ENSPSIG00000006476	SRP54	100	99.008	ENSMICG00000010270	SRP54	100	99.008	Microcebus_murinus
ENSPSIG00000006476	SRP54	87	98.636	ENSMOCG00000000948	-	100	98.636	Microtus_ochrogaster
ENSPSIG00000006476	SRP54	90	92.731	ENSMMOG00000020303	srp54	99	92.731	Mola_mola
ENSPSIG00000006476	SRP54	100	98.810	ENSMODG00000023150	-	100	98.810	Monodelphis_domestica
ENSPSIG00000006476	SRP54	100	98.810	ENSMODG00000012925	-	100	98.810	Monodelphis_domestica
ENSPSIG00000006476	SRP54	88	95.034	ENSMALG00000009163	srp54	98	95.034	Monopterus_albus
ENSPSIG00000006476	SRP54	100	98.810	MGP_CAROLIEiJ_G0017754	-	100	98.810	Mus_caroli
ENSPSIG00000006476	SRP54	100	98.810	ENSMUSG00000073079	Srp54a	100	99.091	Mus_musculus
ENSPSIG00000006476	SRP54	100	98.810	ENSMUSG00000112449	Srp54b	100	98.810	Mus_musculus
ENSPSIG00000006476	SRP54	100	98.016	ENSMUSG00000079108	Srp54c	100	98.016	Mus_musculus
ENSPSIG00000006476	SRP54	100	98.810	MGP_PahariEiJ_G0029510	-	100	98.810	Mus_pahari
ENSPSIG00000006476	SRP54	100	99.008	ENSMPUG00000016302	SRP54	100	99.008	Mustela_putorius_furo
ENSPSIG00000006476	SRP54	100	98.413	ENSMLUG00000008958	SRP54	100	98.413	Myotis_lucifugus
ENSPSIG00000006476	SRP54	100	88.889	ENSNGAG00000019806	-	100	88.889	Nannospalax_galili
ENSPSIG00000006476	SRP54	87	95.455	ENSNBRG00000006000	srp54	100	95.455	Neolamprologus_brichardi
ENSPSIG00000006476	SRP54	100	99.008	ENSNLEG00000003496	SRP54	100	99.008	Nomascus_leucogenys
ENSPSIG00000006476	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSPSIG00000006476	SRP54	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSPSIG00000006476	SRP54	100	99.008	ENSODEG00000004865	SRP54	100	99.008	Octodon_degus
ENSPSIG00000006476	SRP54	100	95.833	ENSONIG00000011768	srp54	100	95.833	Oreochromis_niloticus
ENSPSIG00000006476	SRP54	100	99.008	ENSOANG00000014051	SRP54	100	99.008	Ornithorhynchus_anatinus
ENSPSIG00000006476	SRP54	100	98.413	ENSOCUG00000007838	SRP54	100	98.413	Oryctolagus_cuniculus
ENSPSIG00000006476	SRP54	100	95.635	ENSORLG00000010027	srp54	100	95.635	Oryzias_latipes
ENSPSIG00000006476	SRP54	100	95.635	ENSORLG00020001878	srp54	100	95.635	Oryzias_latipes_hni
ENSPSIG00000006476	SRP54	100	95.635	ENSORLG00015021866	srp54	100	95.635	Oryzias_latipes_hsok
ENSPSIG00000006476	SRP54	100	95.437	ENSOMEG00000020952	srp54	100	95.437	Oryzias_melastigma
ENSPSIG00000006476	SRP54	100	99.008	ENSOGAG00000012188	SRP54	100	99.008	Otolemur_garnettii
ENSPSIG00000006476	SRP54	100	99.008	ENSOARG00000007160	SRP54	100	99.008	Ovis_aries
ENSPSIG00000006476	SRP54	100	99.008	ENSPPAG00000017434	SRP54	100	99.008	Pan_paniscus
ENSPSIG00000006476	SRP54	100	97.817	ENSPPRG00000014047	SRP54	100	97.817	Panthera_pardus
ENSPSIG00000006476	SRP54	100	98.810	ENSPTIG00000000744	SRP54	96	98.810	Panthera_tigris_altaica
ENSPSIG00000006476	SRP54	100	99.008	ENSPTRG00000006259	FAM177A1	100	99.008	Pan_troglodytes
ENSPSIG00000006476	SRP54	100	99.008	ENSPANG00000023853	SRP54	100	99.008	Papio_anubis
ENSPSIG00000006476	SRP54	100	95.833	ENSPKIG00000001953	srp54	100	95.833	Paramormyrops_kingsleyae
ENSPSIG00000006476	SRP54	91	92.779	ENSPMGG00000004127	srp54	99	92.779	Periophthalmus_magnuspinnatus
ENSPSIG00000006476	SRP54	100	86.706	ENSPEMG00000019634	-	100	86.706	Peromyscus_maniculatus_bairdii
ENSPSIG00000006476	SRP54	100	88.690	ENSPMAG00000006078	-	100	88.690	Petromyzon_marinus
ENSPSIG00000006476	SRP54	100	98.810	ENSPCIG00000016175	SRP54	100	98.810	Phascolarctos_cinereus
ENSPSIG00000006476	SRP54	100	95.833	ENSPFOG00000008870	srp54	100	95.833	Poecilia_formosa
ENSPSIG00000006476	SRP54	100	95.833	ENSPLAG00000009889	srp54	100	95.833	Poecilia_latipinna
ENSPSIG00000006476	SRP54	100	95.833	ENSPMEG00000008601	srp54	100	95.833	Poecilia_mexicana
ENSPSIG00000006476	SRP54	100	95.833	ENSPREG00000004505	srp54	100	95.833	Poecilia_reticulata
ENSPSIG00000006476	SRP54	100	93.849	ENSPPYG00000005739	SRP54	100	93.849	Pongo_abelii
ENSPSIG00000006476	SRP54	100	94.841	ENSPCAG00000006268	SRP54	100	94.841	Procavia_capensis
ENSPSIG00000006476	SRP54	100	97.030	ENSPCOG00000022473	SRP54	100	97.030	Propithecus_coquereli
ENSPSIG00000006476	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSPSIG00000006476	SRP54	100	95.833	ENSPNYG00000009717	srp54	100	95.833	Pundamilia_nyererei
ENSPSIG00000006476	SRP54	100	96.032	ENSPNAG00000008544	srp54	100	96.032	Pygocentrus_nattereri
ENSPSIG00000006476	SRP54	100	98.611	ENSRNOG00000032776	Srp54a	100	98.611	Rattus_norvegicus
ENSPSIG00000006476	SRP54	100	99.008	ENSRROG00000041292	SRP54	100	99.008	Rhinopithecus_roxellana
ENSPSIG00000006476	SRP54	86	53.061	YPR088C	SRP54	95	48.467	Saccharomyces_cerevisiae
ENSPSIG00000006476	SRP54	94	98.945	ENSSBOG00000035145	SRP54	100	98.945	Saimiri_boliviensis_boliviensis
ENSPSIG00000006476	SRP54	68	99.125	ENSSHAG00000000671	SRP54	100	99.125	Sarcophilus_harrisii
ENSPSIG00000006476	SRP54	100	96.032	ENSSFOG00015013920	srp54	100	96.032	Scleropages_formosus
ENSPSIG00000006476	SRP54	100	89.700	ENSSMAG00000002441	srp54	100	89.700	Scophthalmus_maximus
ENSPSIG00000006476	SRP54	100	95.437	ENSSDUG00000018586	srp54	100	95.437	Seriola_dumerili
ENSPSIG00000006476	SRP54	100	95.238	ENSSLDG00000010476	srp54	100	95.238	Seriola_lalandi_dorsalis
ENSPSIG00000006476	SRP54	100	99.008	ENSSARG00000002744	SRP54	100	99.008	Sorex_araneus
ENSPSIG00000006476	SRP54	100	99.802	ENSSPUG00000013101	SRP54	100	99.802	Sphenodon_punctatus
ENSPSIG00000006476	SRP54	100	95.635	ENSSPAG00000002354	srp54	100	95.635	Stegastes_partitus
ENSPSIG00000006476	SRP54	100	99.008	ENSSSCG00000001955	SRP54	100	99.008	Sus_scrofa
ENSPSIG00000006476	SRP54	94	99.367	ENSTGUG00000011945	-	95	99.367	Taeniopygia_guttata
ENSPSIG00000006476	SRP54	100	94.841	ENSTRUG00000007057	srp54	100	94.841	Takifugu_rubripes
ENSPSIG00000006476	SRP54	100	94.444	ENSTNIG00000002589	srp54	100	94.444	Tetraodon_nigroviridis
ENSPSIG00000006476	SRP54	89	90.380	ENSTBEG00000011409	SRP54	100	90.380	Tupaia_belangeri
ENSPSIG00000006476	SRP54	100	88.889	ENSTTRG00000000928	SRP54	100	88.889	Tursiops_truncatus
ENSPSIG00000006476	SRP54	52	99.237	ENSUAMG00000012385	SRP54	100	99.237	Ursus_americanus
ENSPSIG00000006476	SRP54	100	99.008	ENSUMAG00000011234	SRP54	100	99.008	Ursus_maritimus
ENSPSIG00000006476	SRP54	94	98.734	ENSVPAG00000005668	SRP54	100	98.734	Vicugna_pacos
ENSPSIG00000006476	SRP54	100	99.008	ENSVVUG00000019962	SRP54	100	99.008	Vulpes_vulpes
ENSPSIG00000006476	SRP54	100	82.051	ENSXETG00000012290	srp54	100	82.051	Xenopus_tropicalis
ENSPSIG00000006476	SRP54	88	95.485	ENSXCOG00000004658	srp54	96	95.485	Xiphophorus_couchianus
ENSPSIG00000006476	SRP54	100	95.833	ENSXMAG00000018315	srp54	100	95.833	Xiphophorus_maculatus