EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000006481 (Gene tree)
Gene ID: 102459363
Gene Symbol: BMS1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 47245 bases
Position: chrJH206398.1:490330-537574
Accession: 102459363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000007211	AARP2CN	PF08142.12	3e-31	1	1
ENSPSIP00000007190	AARP2CN	PF08142.12	3.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000007252	BMS1-202	5357	XM_006114407	ENSPSIP00000007211	1297 (aa)	-	K7FGQ1
ENSPSIT00000007231	BMS1-201	5973	XM_006114406	ENSPSIP00000007190	1320 (aa)	XP_006114468	K7FGN0

Gene Model

Click here to download ENSPSIG00000006481's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006481	BMS1	99	72.419	ENSG00000165733	BMS1	99	71.123	Homo_sapiens
ENSPSIG00000006481	BMS1	70	74.564	ENSAPOG00000002296	bms1	92	67.130	Acanthochromis_polyacanthus
ENSPSIG00000006481	BMS1	99	72.231	ENSAMEG00000016834	BMS1	99	71.559	Ailuropoda_melanoleuca
ENSPSIG00000006481	BMS1	77	80.541	ENSACIG00000002588	bms1	85	77.805	Amphilophus_citrinellus
ENSPSIG00000006481	BMS1	81	71.719	ENSAOCG00000018088	bms1	53	66.822	Amphiprion_ocellaris
ENSPSIG00000006481	BMS1	81	71.719	ENSAPEG00000014673	bms1	90	69.872	Amphiprion_percula
ENSPSIG00000006481	BMS1	89	66.132	ENSATEG00000023465	bms1	92	72.805	Anabas_testudineus
ENSPSIG00000006481	BMS1	95	79.742	ENSAPLG00000003759	BMS1	99	78.117	Anas_platyrhynchos
ENSPSIG00000006481	BMS1	99	76.982	ENSACAG00000004537	-	100	76.274	Anolis_carolinensis
ENSPSIG00000006481	BMS1	98	71.669	ENSANAG00000023432	BMS1	99	70.593	Aotus_nancymaae
ENSPSIG00000006481	BMS1	86	68.438	ENSACLG00000001294	bms1	95	67.296	Astatotilapia_calliptera
ENSPSIG00000006481	BMS1	81	74.828	ENSAMXG00000011236	bms1	100	61.621	Astyanax_mexicanus
ENSPSIG00000006481	BMS1	99	71.742	ENSBTAG00000012878	BMS1	100	71.899	Bos_taurus
ENSPSIG00000006481	BMS1	78	53.750	WBGene00022021	Y61A9LA.10	96	53.750	Caenorhabditis_elegans
ENSPSIG00000006481	BMS1	99	71.856	ENSCJAG00000021705	BMS1	99	71.352	Callithrix_jacchus
ENSPSIG00000006481	BMS1	99	72.686	ENSCAFG00000007114	BMS1	100	72.387	Canis_familiaris
ENSPSIG00000006481	BMS1	99	72.686	ENSCAFG00020025282	BMS1	100	72.387	Canis_lupus_dingo
ENSPSIG00000006481	BMS1	99	72.125	ENSCHIG00000023251	BMS1	100	72.226	Capra_hircus
ENSPSIG00000006481	BMS1	99	68.466	ENSCAPG00000008652	BMS1	99	68.356	Cavia_aperea
ENSPSIG00000006481	BMS1	99	71.858	ENSCPOG00000000502	BMS1	99	70.859	Cavia_porcellus
ENSPSIG00000006481	BMS1	99	59.021	ENSCCAG00000024969	-	99	57.416	Cebus_capucinus
ENSPSIG00000006481	BMS1	90	54.507	ENSCATG00000008695	-	97	53.617	Cercocebus_atys
ENSPSIG00000006481	BMS1	99	72.456	ENSCATG00000030625	-	98	72.194	Cercocebus_atys
ENSPSIG00000006481	BMS1	99	72.012	ENSCLAG00000002446	BMS1	99	70.827	Chinchilla_lanigera
ENSPSIG00000006481	BMS1	99	72.657	ENSCSAG00000011118	BMS1	99	71.002	Chlorocebus_sabaeus
ENSPSIG00000006481	BMS1	99	71.951	ENSCHOG00000011055	BMS1	100	72.588	Choloepus_hoffmanni
ENSPSIG00000006481	BMS1	99	90.930	ENSCPBG00000025581	BMS1	99	89.498	Chrysemys_picta_bellii
ENSPSIG00000006481	BMS1	78	60.147	ENSCING00000003181	-	97	60.442	Ciona_intestinalis
ENSPSIG00000006481	BMS1	68	55.981	ENSCSAVG00000004113	-	88	55.841	Ciona_savignyi
ENSPSIG00000006481	BMS1	98	73.451	ENSCANG00000011609	BMS1	99	72.043	Colobus_angolensis_palliatus
ENSPSIG00000006481	BMS1	99	72.197	ENSCGRG00001019461	Bms1	99	71.648	Cricetulus_griseus_chok1gshd
ENSPSIG00000006481	BMS1	99	72.197	ENSCGRG00000009016	Bms1	99	71.648	Cricetulus_griseus_crigri
ENSPSIG00000006481	BMS1	82	75.176	ENSCSEG00000002469	bms1	92	68.167	Cynoglossus_semilaevis
ENSPSIG00000006481	BMS1	84	69.391	ENSCVAG00000008371	bms1	96	67.767	Cyprinodon_variegatus
ENSPSIG00000006481	BMS1	83	73.804	ENSDARG00000054154	bms1	99	62.452	Danio_rerio
ENSPSIG00000006481	BMS1	99	72.581	ENSDNOG00000015761	BMS1	99	73.425	Dasypus_novemcinctus
ENSPSIG00000006481	BMS1	99	73.029	ENSDORG00000002982	Bms1	99	72.629	Dipodomys_ordii
ENSPSIG00000006481	BMS1	80	60.049	FBgn0036686	CG7728	94	59.854	Drosophila_melanogaster
ENSPSIG00000006481	BMS1	85	74.107	ENSETEG00000009554	BMS1	74	74.107	Echinops_telfairi
ENSPSIG00000006481	BMS1	99	73.062	ENSEASG00005006894	BMS1	100	72.874	Equus_asinus_asinus
ENSPSIG00000006481	BMS1	99	73.446	ENSECAG00000001358	BMS1	100	72.797	Equus_caballus
ENSPSIG00000006481	BMS1	89	67.169	ENSELUG00000001756	bms1	94	67.901	Esox_lucius
ENSPSIG00000006481	BMS1	99	72.720	ENSFCAG00000011220	BMS1	100	71.756	Felis_catus
ENSPSIG00000006481	BMS1	99	77.953	ENSFALG00000006882	BMS1	99	78.182	Ficedula_albicollis
ENSPSIG00000006481	BMS1	99	71.243	ENSFDAG00000001422	BMS1	99	70.692	Fukomys_damarensis
ENSPSIG00000006481	BMS1	85	70.661	ENSFHEG00000003367	bms1	94	68.959	Fundulus_heteroclitus
ENSPSIG00000006481	BMS1	89	66.535	ENSGMOG00000000718	bms1	96	65.558	Gadus_morhua
ENSPSIG00000006481	BMS1	99	77.502	ENSGALG00000002624	BMS1	99	77.803	Gallus_gallus
ENSPSIG00000006481	BMS1	91	66.667	ENSGACG00000015334	bms1	88	65.873	Gasterosteus_aculeatus
ENSPSIG00000006481	BMS1	99	86.880	ENSGAGG00000003467	BMS1	100	87.156	Gopherus_agassizii
ENSPSIG00000006481	BMS1	86	68.438	ENSHBUG00000022628	bms1	95	67.296	Haplochromis_burtoni
ENSPSIG00000006481	BMS1	99	71.296	ENSHGLG00000000477	BMS1	99	69.602	Heterocephalus_glaber_female
ENSPSIG00000006481	BMS1	99	71.296	ENSHGLG00100002176	BMS1	99	69.602	Heterocephalus_glaber_male
ENSPSIG00000006481	BMS1	94	66.359	ENSHCOG00000017604	bms1	96	66.796	Hippocampus_comes
ENSPSIG00000006481	BMS1	88	68.175	ENSIPUG00000017855	bms1	94	72.360	Ictalurus_punctatus
ENSPSIG00000006481	BMS1	99	72.783	ENSSTOG00000015063	BMS1	99	70.901	Ictidomys_tridecemlineatus
ENSPSIG00000006481	BMS1	99	72.636	ENSJJAG00000017328	Bms1	99	71.121	Jaculus_jaculus
ENSPSIG00000006481	BMS1	56	67.300	ENSKMAG00000021982	bms1	89	66.797	Kryptolebias_marmoratus
ENSPSIG00000006481	BMS1	86	66.934	ENSLBEG00000028208	bms1	97	66.511	Labrus_bergylta
ENSPSIG00000006481	BMS1	99	64.006	ENSLACG00000001600	BMS1	100	64.318	Latimeria_chalumnae
ENSPSIG00000006481	BMS1	83	77.397	ENSLOCG00000012914	bms1	99	64.571	Lepisosteus_oculatus
ENSPSIG00000006481	BMS1	99	71.429	ENSLAFG00000006250	BMS1	99	70.098	Loxodonta_africana
ENSPSIG00000006481	BMS1	81	79.344	ENSMFAG00000037771	BMS1	96	80.039	Macaca_fascicularis
ENSPSIG00000006481	BMS1	90	62.542	ENSMMUG00000007426	-	99	61.307	Macaca_mulatta
ENSPSIG00000006481	BMS1	88	55.756	ENSMLEG00000029084	-	100	54.811	Mandrillus_leucophaeus
ENSPSIG00000006481	BMS1	89	66.197	ENSMAMG00000020855	bms1	92	67.857	Mastacembelus_armatus
ENSPSIG00000006481	BMS1	86	68.438	ENSMZEG00005005663	bms1	95	67.296	Maylandia_zebra
ENSPSIG00000006481	BMS1	95	78.247	ENSMGAG00000001170	BMS1	99	77.574	Meleagris_gallopavo
ENSPSIG00000006481	BMS1	99	72.235	ENSMAUG00000002195	Bms1	99	71.834	Mesocricetus_auratus
ENSPSIG00000006481	BMS1	99	72.184	ENSMICG00000009977	BMS1	100	71.232	Microcebus_murinus
ENSPSIG00000006481	BMS1	98	72.158	ENSMOCG00000002038	Bms1	99	71.298	Microtus_ochrogaster
ENSPSIG00000006481	BMS1	85	68.303	ENSMMOG00000000977	bms1	97	66.731	Mola_mola
ENSPSIG00000006481	BMS1	99	75.267	ENSMODG00000001177	BMS1	99	75.477	Monodelphis_domestica
ENSPSIG00000006481	BMS1	99	61.443	ENSMALG00000009680	bms1	92	70.815	Monopterus_albus
ENSPSIG00000006481	BMS1	72	87.440	MGP_CAROLIEiJ_G0028785	-	85	87.864	Mus_caroli
ENSPSIG00000006481	BMS1	98	72.755	ENSMUSG00000030138	Bms1	99	71.309	Mus_musculus
ENSPSIG00000006481	BMS1	98	72.593	MGP_PahariEiJ_G0022539	Bms1	99	72.018	Mus_pahari
ENSPSIG00000006481	BMS1	98	72.833	MGP_SPRETEiJ_G0029816	Bms1	99	71.559	Mus_spretus
ENSPSIG00000006481	BMS1	99	72.866	ENSMPUG00000017276	BMS1	100	72.554	Mustela_putorius_furo
ENSPSIG00000006481	BMS1	99	72.031	ENSMLUG00000003260	BMS1	100	71.813	Myotis_lucifugus
ENSPSIG00000006481	BMS1	98	64.551	ENSNGAG00000015258	Bms1	92	69.764	Nannospalax_galili
ENSPSIG00000006481	BMS1	99	70.734	ENSNLEG00000015791	BMS1	99	71.055	Nomascus_leucogenys
ENSPSIG00000006481	BMS1	80	86.052	ENSOPRG00000005195	BMS1	67	86.461	Ochotona_princeps
ENSPSIG00000006481	BMS1	99	71.803	ENSODEG00000005554	BMS1	99	70.615	Octodon_degus
ENSPSIG00000006481	BMS1	89	68.921	ENSONIG00000007227	bms1	97	66.929	Oreochromis_niloticus
ENSPSIG00000006481	BMS1	99	73.668	ENSOANG00000000662	-	100	73.890	Ornithorhynchus_anatinus
ENSPSIG00000006481	BMS1	99	73.103	ENSOCUG00000005354	BMS1	99	71.614	Oryctolagus_cuniculus
ENSPSIG00000006481	BMS1	86	68.288	ENSORLG00000014655	bms1	94	67.961	Oryzias_latipes
ENSPSIG00000006481	BMS1	86	68.577	ENSORLG00020016246	bms1	92	68.566	Oryzias_latipes_hni
ENSPSIG00000006481	BMS1	86	68.872	ENSORLG00015014183	bms1	98	68.350	Oryzias_latipes_hsok
ENSPSIG00000006481	BMS1	81	74.886	ENSOMEG00000015042	bms1	96	67.453	Oryzias_melastigma
ENSPSIG00000006481	BMS1	99	72.915	ENSOGAG00000006511	BMS1	99	72.353	Otolemur_garnettii
ENSPSIG00000006481	BMS1	99	72.167	ENSOARG00000003900	BMS1	100	72.324	Ovis_aries
ENSPSIG00000006481	BMS1	99	69.053	ENSPPAG00000027837	BMS1	99	67.930	Pan_paniscus
ENSPSIG00000006481	BMS1	99	72.700	ENSPPRG00000001311	BMS1	100	71.701	Panthera_pardus
ENSPSIG00000006481	BMS1	99	71.309	ENSPTIG00000009652	BMS1	100	70.665	Panthera_tigris_altaica
ENSPSIG00000006481	BMS1	99	72.573	ENSPTRG00000002441	BMS1	99	71.047	Pan_troglodytes
ENSPSIG00000006481	BMS1	99	66.744	ENSPEMG00000022467	Bms1	99	66.230	Peromyscus_maniculatus_bairdii
ENSPSIG00000006481	BMS1	94	87.919	ENSPCIG00000001339	BMS1	99	84.167	Phascolarctos_cinereus
ENSPSIG00000006481	BMS1	84	68.973	ENSPFOG00000015180	bms1	96	66.981	Poecilia_formosa
ENSPSIG00000006481	BMS1	84	69.182	ENSPMEG00000023176	bms1	90	66.863	Poecilia_mexicana
ENSPSIG00000006481	BMS1	84	68.211	ENSPREG00000002695	bms1	95	67.036	Poecilia_reticulata
ENSPSIG00000006481	BMS1	60	69.738	ENSPPYG00000002836	-	99	67.734	Pongo_abelii
ENSPSIG00000006481	BMS1	72	84.354	ENSPCAG00000014528	BMS1	70	77.973	Procavia_capensis
ENSPSIG00000006481	BMS1	95	69.673	ENSPCOG00000023834	-	99	81.292	Propithecus_coquereli
ENSPSIG00000006481	BMS1	99	71.101	ENSPVAG00000000725	BMS1	100	70.805	Pteropus_vampyrus
ENSPSIG00000006481	BMS1	87	68.058	ENSPNYG00000018866	bms1	92	65.756	Pundamilia_nyererei
ENSPSIG00000006481	BMS1	50	66.667	ENSPNAG00000000676	bms1	99	62.538	Pygocentrus_nattereri
ENSPSIG00000006481	BMS1	82	71.747	ENSRNOG00000006576	Bms1	100	72.015	Rattus_norvegicus
ENSPSIG00000006481	BMS1	98	71.067	ENSRROG00000040101	BMS1	99	69.781	Rhinopithecus_roxellana
ENSPSIG00000006481	BMS1	71	45.418	YPL217C	-	70	50.372	Saccharomyces_cerevisiae
ENSPSIG00000006481	BMS1	99	72.201	ENSSBOG00000035778	BMS1	99	71.726	Saimiri_boliviensis_boliviensis
ENSPSIG00000006481	BMS1	99	72.946	ENSSHAG00000005062	BMS1	99	72.844	Sarcophilus_harrisii
ENSPSIG00000006481	BMS1	90	69.231	ENSSFOG00015022313	bms1	99	61.843	Scleropages_formosus
ENSPSIG00000006481	BMS1	81	75.172	ENSSMAG00000019966	bms1	89	72.034	Scophthalmus_maximus
ENSPSIG00000006481	BMS1	87	67.308	ENSSDUG00000016875	bms1	99	60.320	Seriola_dumerili
ENSPSIG00000006481	BMS1	85	67.308	ENSSLDG00000015199	bms1	99	60.437	Seriola_lalandi_dorsalis
ENSPSIG00000006481	BMS1	70	60.044	ENSSARG00000014407	BMS1	100	60.263	Sorex_araneus
ENSPSIG00000006481	BMS1	99	80.851	ENSSPUG00000014454	BMS1	100	80.122	Sphenodon_punctatus
ENSPSIG00000006481	BMS1	99	73.115	ENSSSCG00000010198	BMS1	99	72.936	Sus_scrofa
ENSPSIG00000006481	BMS1	99	78.023	ENSTGUG00000006302	-	99	77.063	Taeniopygia_guttata
ENSPSIG00000006481	BMS1	87	66.129	ENSTRUG00000008028	bms1	97	64.844	Takifugu_rubripes
ENSPSIG00000006481	BMS1	99	58.747	ENSTNIG00000006216	bms1	84	67.161	Tetraodon_nigroviridis
ENSPSIG00000006481	BMS1	61	77.888	ENSTBEG00000001673	-	63	77.926	Tupaia_belangeri
ENSPSIG00000006481	BMS1	99	70.849	ENSTTRG00000007983	BMS1	100	70.827	Tursiops_truncatus
ENSPSIG00000006481	BMS1	99	73.165	ENSUAMG00000023996	BMS1	100	71.212	Ursus_americanus
ENSPSIG00000006481	BMS1	99	73.012	ENSUMAG00000016523	BMS1	100	71.061	Ursus_maritimus
ENSPSIG00000006481	BMS1	88	67.647	ENSVPAG00000007477	BMS1	93	82.628	Vicugna_pacos
ENSPSIG00000006481	BMS1	99	72.686	ENSVVUG00000021305	BMS1	100	72.506	Vulpes_vulpes
ENSPSIG00000006481	BMS1	98	67.109	ENSXETG00000008158	bms1	99	67.334	Xenopus_tropicalis
ENSPSIG00000006481	BMS1	84	69.068	ENSXCOG00000000506	bms1	93	78.195	Xiphophorus_couchianus
ENSPSIG00000006481	BMS1	84	69.198	ENSXMAG00000014236	bms1	96	67.685	Xiphophorus_maculatus