EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000006488 (Gene tree)
Gene ID: 102449354
Gene Symbol: RIOK1
Alias: -
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 27166 bases
Position: chrJH224661.1:4266342-4293507
Accession: 102449354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000007016	RIO1	PF01163.22	3.1e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000007057	RIOK1-201	2052	XM_006138790	ENSPSIP00000007016	572 (aa)	XP_006138852	K7FG56

Gene Model

Click here to download ENSPSIG00000006488's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000006488	RIOK1	53	42.628	ENSPSIG00000006250	RIOK3	59	42.628

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006488	RIOK1	99	77.504	ENSG00000124784	RIOK1	100	77.289	Homo_sapiens
ENSPSIG00000006488	RIOK1	56	67.802	ENSAPOG00000015632	riok1	99	69.040	Acanthochromis_polyacanthus
ENSPSIG00000006488	RIOK1	99	79.123	ENSAMEG00000017367	RIOK1	100	78.207	Ailuropoda_melanoleuca
ENSPSIG00000006488	RIOK1	87	72.289	ENSACIG00000003735	riok1	88	72.819	Amphilophus_citrinellus
ENSPSIG00000006488	RIOK1	97	67.800	ENSAOCG00000011818	riok1	100	68.402	Amphiprion_ocellaris
ENSPSIG00000006488	RIOK1	97	67.800	ENSAPEG00000001345	riok1	100	68.043	Amphiprion_percula
ENSPSIG00000006488	RIOK1	81	73.377	ENSATEG00000006594	riok1	99	73.377	Anabas_testudineus
ENSPSIG00000006488	RIOK1	83	87.789	ENSAPLG00000004196	RIOK1	100	88.655	Anas_platyrhynchos
ENSPSIG00000006488	RIOK1	99	80.212	ENSACAG00000000695	RIOK1	100	79.115	Anolis_carolinensis
ENSPSIG00000006488	RIOK1	99	67.782	ENSANAG00000023777	RIOK1	100	67.725	Aotus_nancymaae
ENSPSIG00000006488	RIOK1	97	68.694	ENSACLG00000015799	riok1	99	70.072	Astatotilapia_calliptera
ENSPSIG00000006488	RIOK1	97	70.312	ENSAMXG00000015286	riok1	84	76.316	Astyanax_mexicanus
ENSPSIG00000006488	RIOK1	99	78.207	ENSBTAG00000013821	RIOK1	100	77.641	Bos_taurus
ENSPSIG00000006488	RIOK1	81	47.234	WBGene00019698	riok-1	85	47.752	Caenorhabditis_elegans
ENSPSIG00000006488	RIOK1	99	77.289	ENSCJAG00000042960	RIOK1	100	77.425	Callithrix_jacchus
ENSPSIG00000006488	RIOK1	99	79.825	ENSCAFG00000009563	RIOK1	100	78.559	Canis_familiaris
ENSPSIG00000006488	RIOK1	93	78.479	ENSCAFG00020013233	RIOK1	96	77.138	Canis_lupus_dingo
ENSPSIG00000006488	RIOK1	99	78.207	ENSCHIG00000001534	RIOK1	100	77.465	Capra_hircus
ENSPSIG00000006488	RIOK1	66	80.902	ENSTSYG00000011368	RIOK1	100	83.792	Carlito_syrichta
ENSPSIG00000006488	RIOK1	78	82.000	ENSCAPG00000008489	RIOK1	100	82.328	Cavia_aperea
ENSPSIG00000006488	RIOK1	96	75.221	ENSCPOG00000009882	RIOK1	100	75.614	Cavia_porcellus
ENSPSIG00000006488	RIOK1	99	77.817	ENSCCAG00000024061	RIOK1	100	77.954	Cebus_capucinus
ENSPSIG00000006488	RIOK1	99	77.641	ENSCATG00000001548	RIOK1	100	77.601	Cercocebus_atys
ENSPSIG00000006488	RIOK1	99	77.895	ENSCLAG00000003522	RIOK1	100	77.680	Chinchilla_lanigera
ENSPSIG00000006488	RIOK1	92	75.564	ENSCSAG00000007396	RIOK1	98	76.083	Chlorocebus_sabaeus
ENSPSIG00000006488	RIOK1	84	69.279	ENSCHOG00000001873	RIOK1	85	70.126	Choloepus_hoffmanni
ENSPSIG00000006488	RIOK1	94	92.551	ENSCPBG00000008685	RIOK1	93	91.993	Chrysemys_picta_bellii
ENSPSIG00000006488	RIOK1	99	77.465	ENSCANG00000032919	RIOK1	100	77.249	Colobus_angolensis_palliatus
ENSPSIG00000006488	RIOK1	99	74.780	ENSCGRG00001018868	Riok1	100	73.675	Cricetulus_griseus_chok1gshd
ENSPSIG00000006488	RIOK1	99	74.780	ENSCGRG00000008015	Riok1	100	73.675	Cricetulus_griseus_crigri
ENSPSIG00000006488	RIOK1	87	51.697	ENSCSEG00000015014	riok1	86	52.227	Cynoglossus_semilaevis
ENSPSIG00000006488	RIOK1	57	64.615	ENSCVAG00000011291	riok1	99	64.615	Cyprinodon_variegatus
ENSPSIG00000006488	RIOK1	97	69.449	ENSDARG00000016399	riok1	100	68.739	Danio_rerio
ENSPSIG00000006488	RIOK1	99	76.481	ENSDNOG00000015813	RIOK1	100	76.091	Dasypus_novemcinctus
ENSPSIG00000006488	RIOK1	99	77.233	ENSDORG00000008530	Riok1	100	76.316	Dipodomys_ordii
ENSPSIG00000006488	RIOK1	77	53.319	FBgn0036187	RIOK1	82	52.410	Drosophila_melanogaster
ENSPSIG00000006488	RIOK1	99	77.168	ENSETEG00000020273	RIOK1	100	77.168	Echinops_telfairi
ENSPSIG00000006488	RIOK1	98	62.742	ENSEBUG00000013672	riok1	86	68.699	Eptatretus_burgeri
ENSPSIG00000006488	RIOK1	93	76.208	ENSEASG00005012032	RIOK1	95	77.281	Equus_asinus_asinus
ENSPSIG00000006488	RIOK1	99	77.856	ENSECAG00000009007	RIOK1	100	78.873	Equus_caballus
ENSPSIG00000006488	RIOK1	77	69.545	ENSEEUG00000007123	RIOK1	100	69.545	Erinaceus_europaeus
ENSPSIG00000006488	RIOK1	97	69.326	ENSELUG00000017029	riok1	99	68.929	Esox_lucius
ENSPSIG00000006488	RIOK1	99	77.797	ENSFCAG00000027290	RIOK1	100	76.708	Felis_catus
ENSPSIG00000006488	RIOK1	99	81.436	ENSFALG00000013244	RIOK1	100	81.195	Ficedula_albicollis
ENSPSIG00000006488	RIOK1	99	76.842	ENSFDAG00000019139	RIOK1	100	76.626	Fukomys_damarensis
ENSPSIG00000006488	RIOK1	79	71.397	ENSFHEG00000021419	riok1	98	71.397	Fundulus_heteroclitus
ENSPSIG00000006488	RIOK1	72	73.366	ENSGMOG00000018668	riok1	94	74.010	Gadus_morhua
ENSPSIG00000006488	RIOK1	57	82.622	ENSGALG00000012795	RIOK1	100	83.398	Gallus_gallus
ENSPSIG00000006488	RIOK1	83	61.587	ENSGAFG00000004091	riok1	79	62.815	Gambusia_affinis
ENSPSIG00000006488	RIOK1	95	66.362	ENSGACG00000002496	riok1	94	73.931	Gasterosteus_aculeatus
ENSPSIG00000006488	RIOK1	81	94.372	ENSGAGG00000002262	RIOK1	98	93.723	Gopherus_agassizii
ENSPSIG00000006488	RIOK1	70	77.475	ENSGGOG00000011037	RIOK1	100	77.171	Gorilla_gorilla
ENSPSIG00000006488	RIOK1	99	75.789	ENSHGLG00000008699	RIOK1	100	75.220	Heterocephalus_glaber_female
ENSPSIG00000006488	RIOK1	99	75.965	ENSHGLG00100008188	RIOK1	100	75.395	Heterocephalus_glaber_male
ENSPSIG00000006488	RIOK1	87	70.179	ENSHCOG00000013275	riok1	90	71.690	Hippocampus_comes
ENSPSIG00000006488	RIOK1	97	71.278	ENSIPUG00000003290	riok1	86	77.935	Ictalurus_punctatus
ENSPSIG00000006488	RIOK1	99	77.018	ENSSTOG00000009289	RIOK1	100	78.559	Ictidomys_tridecemlineatus
ENSPSIG00000006488	RIOK1	99	78.383	ENSJJAG00000015152	Riok1	100	78.345	Jaculus_jaculus
ENSPSIG00000006488	RIOK1	68	75.835	ENSKMAG00000019378	riok1	99	75.835	Kryptolebias_marmoratus
ENSPSIG00000006488	RIOK1	87	73.092	ENSLBEG00000016650	riok1	87	74.245	Labrus_bergylta
ENSPSIG00000006488	RIOK1	99	66.783	ENSLACG00000000300	RIOK1	100	66.608	Latimeria_chalumnae
ENSPSIG00000006488	RIOK1	98	73.357	ENSLOCG00000011728	riok1	99	74.067	Lepisosteus_oculatus
ENSPSIG00000006488	RIOK1	99	78.445	ENSLAFG00000005504	RIOK1	100	78.354	Loxodonta_africana
ENSPSIG00000006488	RIOK1	99	77.113	ENSMFAG00000029990	RIOK1	100	77.249	Macaca_fascicularis
ENSPSIG00000006488	RIOK1	99	76.937	ENSMMUG00000015577	RIOK1	100	77.072	Macaca_mulatta
ENSPSIG00000006488	RIOK1	99	73.768	ENSMNEG00000034396	RIOK1	99	78.186	Macaca_nemestrina
ENSPSIG00000006488	RIOK1	99	77.817	ENSMLEG00000026327	RIOK1	100	77.778	Mandrillus_leucophaeus
ENSPSIG00000006488	RIOK1	97	68.592	ENSMAMG00000019557	riok1	88	75.153	Mastacembelus_armatus
ENSPSIG00000006488	RIOK1	97	68.336	ENSMZEG00005019482	riok1	99	69.892	Maylandia_zebra
ENSPSIG00000006488	RIOK1	99	80.944	ENSMGAG00000003816	RIOK1	100	80.600	Meleagris_gallopavo
ENSPSIG00000006488	RIOK1	99	75.309	ENSMAUG00000012751	Riok1	100	74.912	Mesocricetus_auratus
ENSPSIG00000006488	RIOK1	99	77.797	ENSMICG00000044301	RIOK1	85	76.883	Microcebus_murinus
ENSPSIG00000006488	RIOK1	99	73.322	ENSMOCG00000017032	Riok1	100	73.274	Microtus_ochrogaster
ENSPSIG00000006488	RIOK1	83	64.440	ENSMMOG00000020598	riok1	87	64.833	Mola_mola
ENSPSIG00000006488	RIOK1	99	77.504	ENSMODG00000009964	RIOK1	100	76.977	Monodelphis_domestica
ENSPSIG00000006488	RIOK1	87	64.659	ENSMALG00000019982	riok1	89	67.017	Monopterus_albus
ENSPSIG00000006488	RIOK1	97	75.401	MGP_CAROLIEiJ_G0018439	Riok1	100	74.028	Mus_caroli
ENSPSIG00000006488	RIOK1	97	74.643	ENSMUSG00000021428	Riok1	100	74.074	Mus_musculus
ENSPSIG00000006488	RIOK1	97	74.464	MGP_PahariEiJ_G0019507	Riok1	100	73.322	Mus_pahari
ENSPSIG00000006488	RIOK1	97	74.643	MGP_SPRETEiJ_G0019319	Riok1	100	73.675	Mus_spretus
ENSPSIG00000006488	RIOK1	99	78.809	ENSMPUG00000000570	RIOK1	100	77.719	Mustela_putorius_furo
ENSPSIG00000006488	RIOK1	99	77.368	ENSMLUG00000015312	RIOK1	100	76.450	Myotis_lucifugus
ENSPSIG00000006488	RIOK1	99	78.938	ENSNGAG00000021734	Riok1	100	78.584	Nannospalax_galili
ENSPSIG00000006488	RIOK1	69	81.313	ENSNBRG00000017489	riok1	83	75.225	Neolamprologus_brichardi
ENSPSIG00000006488	RIOK1	99	69.718	ENSNLEG00000011621	RIOK1	100	69.312	Nomascus_leucogenys
ENSPSIG00000006488	RIOK1	83	53.684	ENSMEUG00000006679	-	84	54.105	Notamacropus_eugenii
ENSPSIG00000006488	RIOK1	65	80.863	ENSOPRG00000009524	RIOK1	100	80.863	Ochotona_princeps
ENSPSIG00000006488	RIOK1	70	68.329	ENSODEG00000005663	RIOK1	100	68.000	Octodon_degus
ENSPSIG00000006488	RIOK1	97	69.449	ENSONIG00000014010	riok1	98	70.344	Oreochromis_niloticus
ENSPSIG00000006488	RIOK1	81	87.716	ENSOANG00000012553	RIOK1	100	87.716	Ornithorhynchus_anatinus
ENSPSIG00000006488	RIOK1	99	75.952	ENSOCUG00000011824	RIOK1	100	76.098	Oryctolagus_cuniculus
ENSPSIG00000006488	RIOK1	97	67.928	ENSORLG00000008221	riok1	88	73.631	Oryzias_latipes
ENSPSIG00000006488	RIOK1	96	66.546	ENSORLG00020013838	riok1	62	71.487	Oryzias_latipes_hni
ENSPSIG00000006488	RIOK1	97	68.649	ENSORLG00015009817	riok1	98	68.716	Oryzias_latipes_hsok
ENSPSIG00000006488	RIOK1	97	67.684	ENSOMEG00000002758	riok1	80	73.225	Oryzias_melastigma
ENSPSIG00000006488	RIOK1	99	71.880	ENSOGAG00000010192	RIOK1	100	70.000	Otolemur_garnettii
ENSPSIG00000006488	RIOK1	99	78.559	ENSOARG00000017747	RIOK1	100	77.993	Ovis_aries
ENSPSIG00000006488	RIOK1	99	68.596	ENSPPAG00000016349	RIOK1	100	80.122	Pan_paniscus
ENSPSIG00000006488	RIOK1	99	77.312	ENSPPRG00000001932	RIOK1	100	76.440	Panthera_pardus
ENSPSIG00000006488	RIOK1	99	77.487	ENSPTIG00000018545	RIOK1	100	76.708	Panthera_tigris_altaica
ENSPSIG00000006488	RIOK1	99	77.329	ENSPTRG00000017700	RIOK1	100	77.113	Pan_troglodytes
ENSPSIG00000006488	RIOK1	99	77.641	ENSPANG00000016522	RIOK1	100	77.601	Papio_anubis
ENSPSIG00000006488	RIOK1	97	71.864	ENSPKIG00000006442	riok1	100	71.864	Paramormyrops_kingsleyae
ENSPSIG00000006488	RIOK1	72	70.702	ENSPMGG00000017807	riok1	96	68.333	Periophthalmus_magnuspinnatus
ENSPSIG00000006488	RIOK1	99	74.780	ENSPEMG00000017844	Riok1	100	74.382	Peromyscus_maniculatus_bairdii
ENSPSIG00000006488	RIOK1	70	69.343	ENSPMAG00000006351	riok1	80	78.507	Petromyzon_marinus
ENSPSIG00000006488	RIOK1	92	76.128	ENSPCIG00000012653	RIOK1	94	76.128	Phascolarctos_cinereus
ENSPSIG00000006488	RIOK1	97	64.919	ENSPFOG00000011532	riok1	99	66.004	Poecilia_formosa
ENSPSIG00000006488	RIOK1	97	65.099	ENSPLAG00000001341	riok1	99	66.004	Poecilia_latipinna
ENSPSIG00000006488	RIOK1	97	64.738	ENSPMEG00000007710	riok1	99	66.004	Poecilia_mexicana
ENSPSIG00000006488	RIOK1	97	65.280	ENSPREG00000009237	riok1	99	65.280	Poecilia_reticulata
ENSPSIG00000006488	RIOK1	99	77.719	ENSPPYG00000016207	RIOK1	100	78.207	Pongo_abelii
ENSPSIG00000006488	RIOK1	99	68.319	ENSPCAG00000007892	RIOK1	100	67.611	Procavia_capensis
ENSPSIG00000006488	RIOK1	99	77.098	ENSPVAG00000014091	RIOK1	100	76.357	Pteropus_vampyrus
ENSPSIG00000006488	RIOK1	57	71.515	ENSPNYG00000004465	riok1	100	71.818	Pundamilia_nyererei
ENSPSIG00000006488	RIOK1	98	71.454	ENSPNAG00000015435	riok1	99	71.631	Pygocentrus_nattereri
ENSPSIG00000006488	RIOK1	97	75.357	ENSRNOG00000014049	Riok1	100	81.034	Rattus_norvegicus
ENSPSIG00000006488	RIOK1	99	77.817	ENSRBIG00000036685	RIOK1	100	77.072	Rhinopithecus_bieti
ENSPSIG00000006488	RIOK1	99	77.993	ENSRROG00000036611	RIOK1	100	77.249	Rhinopithecus_roxellana
ENSPSIG00000006488	RIOK1	59	40.761	YOR119C	RIO1	96	37.126	Saccharomyces_cerevisiae
ENSPSIG00000006488	RIOK1	99	78.032	ENSSBOG00000012588	RIOK1	100	77.641	Saimiri_boliviensis_boliviensis
ENSPSIG00000006488	RIOK1	84	80.124	ENSSHAG00000003091	RIOK1	93	80.124	Sarcophilus_harrisii
ENSPSIG00000006488	RIOK1	87	77.621	ENSSFOG00015001035	riok1	88	78.138	Scleropages_formosus
ENSPSIG00000006488	RIOK1	57	66.564	ENSSDUG00000007291	riok1	100	66.564	Seriola_dumerili
ENSPSIG00000006488	RIOK1	97	70.344	ENSSLDG00000017657	riok1	99	70.344	Seriola_lalandi_dorsalis
ENSPSIG00000006488	RIOK1	85	75.926	ENSSPUG00000007624	RIOK1	83	75.926	Sphenodon_punctatus
ENSPSIG00000006488	RIOK1	97	68.761	ENSSPAG00000022710	riok1	100	69.300	Stegastes_partitus
ENSPSIG00000006488	RIOK1	99	75.923	ENSSSCG00000001024	RIOK1	100	75.972	Sus_scrofa
ENSPSIG00000006488	RIOK1	99	81.294	ENSTGUG00000002331	RIOK1	100	81.261	Taeniopygia_guttata
ENSPSIG00000006488	RIOK1	52	64.430	ENSTRUG00000001575	-	100	64.430	Takifugu_rubripes
ENSPSIG00000006488	RIOK1	73	62.768	ENSTRUG00000002854	riok1	94	64.767	Takifugu_rubripes
ENSPSIG00000006488	RIOK1	98	61.014	ENSTNIG00000003078	riok1	99	61.404	Tetraodon_nigroviridis
ENSPSIG00000006488	RIOK1	99	76.937	ENSTBEG00000016730	RIOK1	100	75.309	Tupaia_belangeri
ENSPSIG00000006488	RIOK1	84	74.375	ENSTTRG00000017335	RIOK1	81	87.918	Tursiops_truncatus
ENSPSIG00000006488	RIOK1	93	76.994	ENSUAMG00000003721	RIOK1	96	76.022	Ursus_americanus
ENSPSIG00000006488	RIOK1	99	78.596	ENSUMAG00000018461	RIOK1	100	77.680	Ursus_maritimus
ENSPSIG00000006488	RIOK1	60	86.722	ENSVPAG00000010813	-	63	86.722	Vicugna_pacos
ENSPSIG00000006488	RIOK1	99	80.000	ENSVVUG00000005018	RIOK1	100	78.735	Vulpes_vulpes
ENSPSIG00000006488	RIOK1	87	76.305	ENSXETG00000020436	riok1	86	77.413	Xenopus_tropicalis
ENSPSIG00000006488	RIOK1	83	66.737	ENSXCOG00000000245	riok1	100	68.000	Xiphophorus_couchianus
ENSPSIG00000006488	RIOK1	83	68.076	ENSXMAG00000014572	riok1	83	70.946	Xiphophorus_maculatus