EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000006523 (Gene tree)
Gene ID: 102447585
Gene Symbol: RBFOX1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 232530 bases
Position: chrJH209131.1:4532668-4765197
Accession: 102447585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000007059	Fox-1_C	PF12414.8	2.3e-43	1	1
ENSPSIP00000007059	RRM_1	PF00076.22	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000007100	RBFOX1-201	4775	XM_006124573	ENSPSIP00000007059	399 (aa)	XP_006124642	K7FG99

Gene Model

Click here to download ENSPSIG00000006523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000006523	RBFOX1	100	64.976	ENSPSIG00000017828	RBFOX2	100	65.700

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006523	RBFOX1	98	93.893	ENSG00000078328	RBFOX1	100	94.180	Homo_sapiens
ENSPSIG00000006523	RBFOX1	100	76.499	ENSAPOG00000003197	rbfox1	100	76.259	Acanthochromis_polyacanthus
ENSPSIG00000006523	RBFOX1	56	92.793	ENSAMEG00000008605	RBFOX1	89	92.793	Ailuropoda_melanoleuca
ENSPSIG00000006523	RBFOX1	67	64.865	ENSACIG00000005478	rbfox1	68	64.865	Amphilophus_citrinellus
ENSPSIG00000006523	RBFOX1	75	70.347	ENSAOCG00000008283	rbfox1	99	70.032	Amphiprion_ocellaris
ENSPSIG00000006523	RBFOX1	94	69.921	ENSAPEG00000010636	rbfox1	100	69.816	Amphiprion_percula
ENSPSIG00000006523	RBFOX1	75	69.279	ENSATEG00000007513	rbfox1	99	68.966	Anabas_testudineus
ENSPSIG00000006523	RBFOX1	98	98.977	ENSAPLG00000013263	RBFOX1	98	98.977	Anas_platyrhynchos
ENSPSIG00000006523	RBFOX1	98	89.141	ENSACAG00000004013	RBFOX1	99	89.141	Anolis_carolinensis
ENSPSIG00000006523	RBFOX1	100	92.750	ENSANAG00000029527	RBFOX1	100	92.750	Aotus_nancymaae
ENSPSIG00000006523	RBFOX1	56	88.889	ENSAMXG00000002431	rbfox1	72	80.632	Astyanax_mexicanus
ENSPSIG00000006523	RBFOX1	100	92.250	ENSBTAG00000007210	RBFOX1	100	92.250	Bos_taurus
ENSPSIG00000006523	RBFOX1	97	94.859	ENSCJAG00000017351	RBFOX1	93	94.859	Callithrix_jacchus
ENSPSIG00000006523	RBFOX1	97	93.077	ENSCAFG00000019082	RBFOX1	93	93.077	Canis_familiaris
ENSPSIG00000006523	RBFOX1	67	95.149	ENSCAFG00020024881	RBFOX1	75	95.149	Canis_lupus_dingo
ENSPSIG00000006523	RBFOX1	100	92.750	ENSCHIG00000023549	RBFOX1	100	92.750	Capra_hircus
ENSPSIG00000006523	RBFOX1	97	92.545	ENSTSYG00000005334	RBFOX1	100	92.545	Carlito_syrichta
ENSPSIG00000006523	RBFOX1	97	94.072	ENSCAPG00000017669	RBFOX1	100	94.072	Cavia_aperea
ENSPSIG00000006523	RBFOX1	98	93.367	ENSCPOG00000011314	RBFOX1	100	93.367	Cavia_porcellus
ENSPSIG00000006523	RBFOX1	97	92.821	ENSCCAG00000023031	RBFOX1	93	92.821	Cebus_capucinus
ENSPSIG00000006523	RBFOX1	97	92.821	ENSCATG00000033816	RBFOX1	93	92.821	Cercocebus_atys
ENSPSIG00000006523	RBFOX1	100	93.233	ENSCLAG00000012761	RBFOX1	100	93.233	Chinchilla_lanigera
ENSPSIG00000006523	RBFOX1	85	93.255	ENSCSAG00000008739	RBFOX1	91	93.255	Chlorocebus_sabaeus
ENSPSIG00000006523	RBFOX1	98	70.408	ENSCHOG00000012843	RBFOX1	94	70.408	Choloepus_hoffmanni
ENSPSIG00000006523	RBFOX1	100	97.750	ENSCPBG00000026626	RBFOX1	100	97.750	Chrysemys_picta_bellii
ENSPSIG00000006523	RBFOX1	97	92.821	ENSCANG00000033125	RBFOX1	93	92.821	Colobus_angolensis_palliatus
ENSPSIG00000006523	RBFOX1	98	92.875	ENSCGRG00001013729	Rbfox1	99	92.875	Cricetulus_griseus_chok1gshd
ENSPSIG00000006523	RBFOX1	98	92.875	ENSCGRG00000003272	Rbfox1	99	92.875	Cricetulus_griseus_crigri
ENSPSIG00000006523	RBFOX1	94	71.537	ENSCSEG00000008840	rbfox1	100	71.537	Cynoglossus_semilaevis
ENSPSIG00000006523	RBFOX1	100	82.750	ENSDARG00000014746	rbfox1	100	87.805	Danio_rerio
ENSPSIG00000006523	RBFOX1	97	95.116	ENSDNOG00000043612	RBFOX1	94	95.116	Dasypus_novemcinctus
ENSPSIG00000006523	RBFOX1	98	91.392	ENSDORG00000010024	Rbfox1	98	91.392	Dipodomys_ordii
ENSPSIG00000006523	RBFOX1	97	73.333	ENSETEG00000003771	RBFOX1	93	73.333	Echinops_telfairi
ENSPSIG00000006523	RBFOX1	100	93.000	ENSEASG00005011599	RBFOX1	100	93.000	Equus_asinus_asinus
ENSPSIG00000006523	RBFOX1	98	92.602	ENSECAG00000012667	RBFOX1	91	92.962	Equus_caballus
ENSPSIG00000006523	RBFOX1	82	68.605	ENSELUG00000013096	rbfox1	97	68.605	Esox_lucius
ENSPSIG00000006523	RBFOX1	98	94.629	ENSFCAG00000025322	RBFOX1	90	94.629	Felis_catus
ENSPSIG00000006523	RBFOX1	81	99.381	ENSFALG00000004027	RBFOX1	97	99.381	Ficedula_albicollis
ENSPSIG00000006523	RBFOX1	98	93.639	ENSFDAG00000007388	RBFOX1	99	93.639	Fukomys_damarensis
ENSPSIG00000006523	RBFOX1	97	96.667	ENSGALG00000034325	RBFOX1	93	96.667	Gallus_gallus
ENSPSIG00000006523	RBFOX1	97	97.436	ENSGAGG00000023681	RBFOX1	100	99.735	Gopherus_agassizii
ENSPSIG00000006523	RBFOX1	97	92.821	ENSGGOG00000016871	-	99	89.031	Gorilla_gorilla
ENSPSIG00000006523	RBFOX1	100	93.484	ENSHGLG00000016944	RBFOX1	100	93.484	Heterocephalus_glaber_female
ENSPSIG00000006523	RBFOX1	100	93.484	ENSHGLG00100003272	RBFOX1	100	93.484	Heterocephalus_glaber_male
ENSPSIG00000006523	RBFOX1	84	70.317	ENSHCOG00000016419	rbfox1	91	70.317	Hippocampus_comes
ENSPSIG00000006523	RBFOX1	94	84.881	ENSIPUG00000015215	rbfox1	100	84.881	Ictalurus_punctatus
ENSPSIG00000006523	RBFOX1	98	93.130	ENSSTOG00000000322	RBFOX1	100	92.386	Ictidomys_tridecemlineatus
ENSPSIG00000006523	RBFOX1	98	90.331	ENSJJAG00000002575	Rbfox1	99	90.331	Jaculus_jaculus
ENSPSIG00000006523	RBFOX1	97	74.747	ENSLBEG00000014659	rbfox1	98	74.242	Labrus_bergylta
ENSPSIG00000006523	RBFOX1	97	90.051	ENSLOCG00000006675	rbfox1	98	90.051	Lepisosteus_oculatus
ENSPSIG00000006523	RBFOX1	77	96.104	ENSLAFG00000011480	RBFOX1	100	96.104	Loxodonta_africana
ENSPSIG00000006523	RBFOX1	97	93.077	ENSMFAG00000036447	RBFOX1	98	88.471	Macaca_fascicularis
ENSPSIG00000006523	RBFOX1	99	92.658	ENSMMUG00000003458	RBFOX1	99	92.658	Macaca_mulatta
ENSPSIG00000006523	RBFOX1	97	93.077	ENSMNEG00000032034	RBFOX1	93	93.077	Macaca_nemestrina
ENSPSIG00000006523	RBFOX1	97	92.821	ENSMLEG00000015382	RBFOX1	93	92.821	Mandrillus_leucophaeus
ENSPSIG00000006523	RBFOX1	94	74.745	ENSMAMG00000003142	rbfox1	100	75.255	Mastacembelus_armatus
ENSPSIG00000006523	RBFOX1	73	92.096	ENSMGAG00000008606	RBFOX1	98	91.958	Meleagris_gallopavo
ENSPSIG00000006523	RBFOX1	96	55.497	ENSMAUG00000020570	Rbfox1	96	54.167	Mesocricetus_auratus
ENSPSIG00000006523	RBFOX1	97	88.175	ENSMICG00000034286	RBFOX1	97	88.175	Microcebus_murinus
ENSPSIG00000006523	RBFOX1	98	92.875	ENSMOCG00000020932	Rbfox1	100	93.750	Microtus_ochrogaster
ENSPSIG00000006523	RBFOX1	84	73.156	ENSMMOG00000009716	rbfox1	86	72.566	Mola_mola
ENSPSIG00000006523	RBFOX1	80	95.611	ENSMODG00000005826	RBFOX1	90	95.611	Monodelphis_domestica
ENSPSIG00000006523	RBFOX1	98	76.923	ENSMALG00000003337	rbfox1	98	76.808	Monopterus_albus
ENSPSIG00000006523	RBFOX1	98	93.130	MGP_CAROLIEiJ_G0020427	Rbfox1	99	93.130	Mus_caroli
ENSPSIG00000006523	RBFOX1	99	91.919	ENSMUSG00000008658	Rbfox1	99	92.875	Mus_musculus
ENSPSIG00000006523	RBFOX1	98	93.130	MGP_PahariEiJ_G0016135	Rbfox1	99	93.130	Mus_pahari
ENSPSIG00000006523	RBFOX1	98	92.621	MGP_SPRETEiJ_G0021321	Rbfox1	99	92.621	Mus_spretus
ENSPSIG00000006523	RBFOX1	83	93.353	ENSMPUG00000014822	RBFOX1	84	93.353	Mustela_putorius_furo
ENSPSIG00000006523	RBFOX1	77	96.091	ENSMLUG00000015896	RBFOX1	100	96.091	Myotis_lucifugus
ENSPSIG00000006523	RBFOX1	98	93.622	ENSNGAG00000023276	Rbfox1	100	94.588	Nannospalax_galili
ENSPSIG00000006523	RBFOX1	98	60.911	ENSNBRG00000011084	rbfox1	95	60.911	Neolamprologus_brichardi
ENSPSIG00000006523	RBFOX1	97	92.564	ENSNLEG00000010017	-	93	92.564	Nomascus_leucogenys
ENSPSIG00000006523	RBFOX1	97	77.892	ENSMEUG00000012525	RBFOX1	93	77.892	Notamacropus_eugenii
ENSPSIG00000006523	RBFOX1	97	73.846	ENSOPRG00000006199	-	93	73.846	Ochotona_princeps
ENSPSIG00000006523	RBFOX1	98	93.333	ENSODEG00000013166	RBFOX1	99	92.875	Octodon_degus
ENSPSIG00000006523	RBFOX1	85	95.308	ENSOANG00000002379	RBFOX1	91	95.308	Ornithorhynchus_anatinus
ENSPSIG00000006523	RBFOX1	54	94.009	ENSOCUG00000001205	-	96	94.009	Oryctolagus_cuniculus
ENSPSIG00000006523	RBFOX1	98	93.639	ENSOGAG00000025535	RBFOX1	99	93.639	Otolemur_garnettii
ENSPSIG00000006523	RBFOX1	61	83.128	ENSOARG00000005135	RBFOX1	96	83.128	Ovis_aries
ENSPSIG00000006523	RBFOX1	97	94.845	ENSPPAG00000036238	-	100	94.845	Pan_paniscus
ENSPSIG00000006523	RBFOX1	97	92.821	ENSPPRG00000006546	RBFOX1	93	92.821	Panthera_pardus
ENSPSIG00000006523	RBFOX1	98	82.908	ENSPTIG00000021154	RBFOX1	100	81.934	Panthera_tigris_altaica
ENSPSIG00000006523	RBFOX1	97	92.821	ENSPTRG00000007744	RBFOX1	99	89.031	Pan_troglodytes
ENSPSIG00000006523	RBFOX1	97	92.821	ENSPANG00000026500	RBFOX1	93	92.821	Papio_anubis
ENSPSIG00000006523	RBFOX1	75	85.382	ENSPKIG00000019353	rbfox1	88	85.382	Paramormyrops_kingsleyae
ENSPSIG00000006523	RBFOX1	97	85.166	ENSPKIG00000009667	-	95	85.326	Paramormyrops_kingsleyae
ENSPSIG00000006523	RBFOX1	98	93.130	ENSPEMG00000017607	Rbfox1	99	93.130	Peromyscus_maniculatus_bairdii
ENSPSIG00000006523	RBFOX1	73	93.448	ENSPCIG00000026887	RBFOX1	100	93.448	Phascolarctos_cinereus
ENSPSIG00000006523	RBFOX1	83	93.353	ENSPPYG00000007079	-	84	93.353	Pongo_abelii
ENSPSIG00000006523	RBFOX1	87	84.571	ENSPCAG00000002630	RBFOX1	93	84.571	Procavia_capensis
ENSPSIG00000006523	RBFOX1	97	92.308	ENSPCOG00000025687	RBFOX1	93	92.308	Propithecus_coquereli
ENSPSIG00000006523	RBFOX1	97	88.205	ENSPVAG00000013467	RBFOX1	93	88.205	Pteropus_vampyrus
ENSPSIG00000006523	RBFOX1	94	82.323	ENSPNAG00000023109	rbfox1	100	82.323	Pygocentrus_nattereri
ENSPSIG00000006523	RBFOX1	98	93.350	ENSRNOG00000002827	Rbfox1	94	93.350	Rattus_norvegicus
ENSPSIG00000006523	RBFOX1	97	94.845	ENSRBIG00000044478	RBFOX1	100	94.845	Rhinopithecus_bieti
ENSPSIG00000006523	RBFOX1	97	92.821	ENSRROG00000044411	RBFOX1	93	92.821	Rhinopithecus_roxellana
ENSPSIG00000006523	RBFOX1	100	94.737	ENSSBOG00000033726	RBFOX1	100	94.737	Saimiri_boliviensis_boliviensis
ENSPSIG00000006523	RBFOX1	97	93.299	ENSSHAG00000009257	RBFOX1	98	93.299	Sarcophilus_harrisii
ENSPSIG00000006523	RBFOX1	100	69.727	ENSSFOG00015023675	rbfox1	100	69.479	Scleropages_formosus
ENSPSIG00000006523	RBFOX1	88	72.222	ENSSFOG00015009955	-	84	72.222	Scleropages_formosus
ENSPSIG00000006523	RBFOX1	98	76.961	ENSSMAG00000015505	rbfox1	93	76.716	Scophthalmus_maximus
ENSPSIG00000006523	RBFOX1	98	74.365	ENSSDUG00000016413	rbfox1	99	74.112	Seriola_dumerili
ENSPSIG00000006523	RBFOX1	84	72.353	ENSSLDG00000009353	rbfox1	95	71.951	Seriola_lalandi_dorsalis
ENSPSIG00000006523	RBFOX1	84	83.529	ENSSPUG00000009732	RBFOX1	87	85.588	Sphenodon_punctatus
ENSPSIG00000006523	RBFOX1	97	76.847	ENSSPAG00000009723	rbfox1	100	76.601	Stegastes_partitus
ENSPSIG00000006523	RBFOX1	94	94.415	ENSSSCG00000007917	RBFOX1	91	94.415	Sus_scrofa
ENSPSIG00000006523	RBFOX1	97	99.486	ENSTGUG00000004562	RBFOX1	100	99.486	Taeniopygia_guttata
ENSPSIG00000006523	RBFOX1	98	76.961	ENSTRUG00000020940	rbfox1	100	76.961	Takifugu_rubripes
ENSPSIG00000006523	RBFOX1	67	57.643	ENSTNIG00000002567	rbfox1	100	59.236	Tetraodon_nigroviridis
ENSPSIG00000006523	RBFOX1	77	71.104	ENSTBEG00000009169	-	74	71.104	Tupaia_belangeri
ENSPSIG00000006523	RBFOX1	97	92.308	ENSTTRG00000005700	RBFOX1	93	92.308	Tursiops_truncatus
ENSPSIG00000006523	RBFOX1	98	87.817	ENSUAMG00000024633	RBFOX1	100	88.579	Ursus_americanus
ENSPSIG00000006523	RBFOX1	98	80.203	ENSUMAG00000003579	RBFOX1	100	80.203	Ursus_maritimus
ENSPSIG00000006523	RBFOX1	77	93.182	ENSVPAG00000001284	RBFOX1	74	93.182	Vicugna_pacos
ENSPSIG00000006523	RBFOX1	98	94.885	ENSVVUG00000017311	RBFOX1	90	94.885	Vulpes_vulpes