EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000006586 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 1708 bases
Position: chrJH209962.1:67378-69085
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	1	11
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	2	11
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	3	11
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	4	11
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	5	11
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	6	11
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	7	11
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	8	11
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	9	11
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	10	11
ENSPSIP00000007136	zf-C2H2	PF00096.26	3.2e-64	11	11
ENSPSIP00000007136	zf-met	PF12874.7	9.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000007177	-	1122	-	ENSPSIP00000007136	374 (aa)	-	K7FGH6

Gene Model

Click here to download ENSPSIG00000006586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000006586	-	99	40.227	ENSPSIG00000015465	-	75	40.227
ENSPSIG00000006586	-	99	39.286	ENSPSIG00000000760	-	92	39.286
ENSPSIG00000006586	-	99	41.471	ENSPSIG00000015459	-	70	40.845
ENSPSIG00000006586	-	99	40.146	ENSPSIG00000004262	SNAI3	64	40.146
ENSPSIG00000006586	-	99	44.040	ENSPSIG00000009650	-	70	44.040
ENSPSIG00000006586	-	99	47.368	ENSPSIG00000006790	-	95	47.368
ENSPSIG00000006586	-	99	48.029	ENSPSIG00000012865	-	69	48.029
ENSPSIG00000006586	-	99	37.752	ENSPSIG00000009270	-	76	37.394
ENSPSIG00000006586	-	99	42.157	ENSPSIG00000009603	-	100	41.689
ENSPSIG00000006586	-	99	40.769	ENSPSIG00000005672	-	67	40.769
ENSPSIG00000006586	-	99	40.800	ENSPSIG00000013021	-	77	41.216
ENSPSIG00000006586	-	99	30.270	ENSPSIG00000002538	ZNF521	95	30.000
ENSPSIG00000006586	-	99	32.778	ENSPSIG00000011562	-	83	32.778
ENSPSIG00000006586	-	99	39.665	ENSPSIG00000012112	GFI1B	59	39.665
ENSPSIG00000006586	-	99	40.000	ENSPSIG00000010248	-	65	40.000
ENSPSIG00000006586	-	99	43.580	ENSPSIG00000009893	-	67	43.580
ENSPSIG00000006586	-	99	41.155	ENSPSIG00000000333	-	78	41.155
ENSPSIG00000006586	-	99	40.206	ENSPSIG00000010328	-	66	40.000
ENSPSIG00000006586	-	99	39.514	ENSPSIG00000005128	-	100	39.514
ENSPSIG00000006586	-	99	54.369	ENSPSIG00000000672	-	84	54.369
ENSPSIG00000006586	-	99	37.453	ENSPSIG00000000075	-	80	39.482
ENSPSIG00000006586	-	99	33.249	ENSPSIG00000005522	ZNF646	96	44.444
ENSPSIG00000006586	-	99	42.363	ENSPSIG00000012650	-	73	42.363
ENSPSIG00000006586	-	99	35.013	ENSPSIG00000004303	ZNF319	96	35.013
ENSPSIG00000006586	-	92	41.964	ENSPSIG00000001739	-	99	39.655
ENSPSIG00000006586	-	99	40.669	ENSPSIG00000001026	-	90	40.669
ENSPSIG00000006586	-	99	38.177	ENSPSIG00000005603	-	69	38.177
ENSPSIG00000006586	-	99	41.954	ENSPSIG00000010405	-	99	42.034
ENSPSIG00000006586	-	99	34.091	ENSPSIG00000016553	-	73	34.091
ENSPSIG00000006586	-	99	37.867	ENSPSIG00000008588	-	100	38.830
ENSPSIG00000006586	-	99	42.202	ENSPSIG00000016395	SNAI2	53	42.202
ENSPSIG00000006586	-	99	37.354	ENSPSIG00000002565	-	56	36.797
ENSPSIG00000006586	-	99	42.358	ENSPSIG00000000522	-	83	42.478
ENSPSIG00000006586	-	78	36.842	ENSPSIG00000006768	OVOL2	68	36.842
ENSPSIG00000006586	-	99	54.545	ENSPSIG00000002569	-	73	54.545
ENSPSIG00000006586	-	99	37.097	ENSPSIG00000003607	SNAI1	58	37.097
ENSPSIG00000006586	-	99	45.614	ENSPSIG00000004614	-	88	45.614
ENSPSIG00000006586	-	99	45.902	ENSPSIG00000015216	-	74	45.902
ENSPSIG00000006586	-	99	42.202	ENSPSIG00000003152	-	80	42.202
ENSPSIG00000006586	-	99	39.754	ENSPSIG00000004502	-	57	39.754
ENSPSIG00000006586	-	99	42.025	ENSPSIG00000016380	-	76	42.628
ENSPSIG00000006586	-	99	53.608	ENSPSIG00000016247	-	53	53.608
ENSPSIG00000006586	-	99	33.333	ENSPSIG00000004682	ZNF652	81	33.333
ENSPSIG00000006586	-	100	34.080	ENSPSIG00000013505	PRDM5	73	34.080
ENSPSIG00000006586	-	91	39.450	ENSPSIG00000011896	ZIC3	62	39.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006586	-	99	42.642	ENSACAG00000024898	-	98	42.642	Anolis_carolinensis
ENSPSIG00000006586	-	99	40.310	ENSACAG00000024956	-	77	40.310	Anolis_carolinensis
ENSPSIG00000006586	-	99	51.190	ENSACAG00000008664	-	66	43.882	Anolis_carolinensis
ENSPSIG00000006586	-	99	44.094	ENSAMXG00000038325	-	91	43.346	Astyanax_mexicanus
ENSPSIG00000006586	-	99	43.750	ENSAMXG00000038636	-	98	40.705	Astyanax_mexicanus
ENSPSIG00000006586	-	99	43.571	ENSAMXG00000032841	-	84	43.571	Astyanax_mexicanus
ENSPSIG00000006586	-	99	46.250	ENSAMXG00000034344	-	81	46.250	Astyanax_mexicanus
ENSPSIG00000006586	-	99	48.649	ENSAMXG00000042784	-	95	48.649	Astyanax_mexicanus
ENSPSIG00000006586	-	99	42.470	ENSAMXG00000038536	-	86	43.438	Astyanax_mexicanus
ENSPSIG00000006586	-	99	38.710	ENSAMXG00000035246	-	68	38.710	Astyanax_mexicanus
ENSPSIG00000006586	-	99	47.727	ENSAMXG00000036233	-	80	40.909	Astyanax_mexicanus
ENSPSIG00000006586	-	99	41.867	ENSAMXG00000042746	-	86	42.812	Astyanax_mexicanus
ENSPSIG00000006586	-	99	42.627	ENSAMXG00000034847	-	85	43.015	Astyanax_mexicanus
ENSPSIG00000006586	-	99	41.039	ENSAMXG00000010805	-	97	43.689	Astyanax_mexicanus
ENSPSIG00000006586	-	99	41.159	ENSAMXG00000025452	-	99	41.875	Astyanax_mexicanus
ENSPSIG00000006586	-	100	46.729	ENSBTAG00000038322	-	76	46.729	Bos_taurus
ENSPSIG00000006586	-	99	43.421	ENSCPBG00000026433	-	56	42.286	Chrysemys_picta_bellii
ENSPSIG00000006586	-	99	64.576	ENSCPBG00000013652	-	78	64.576	Chrysemys_picta_bellii
ENSPSIG00000006586	-	99	43.643	ENSCPBG00000001526	-	82	44.118	Chrysemys_picta_bellii
ENSPSIG00000006586	-	99	34.589	ENSCPBG00000008580	-	82	34.897	Chrysemys_picta_bellii
ENSPSIG00000006586	-	99	38.109	ENSCSAVG00000010960	-	99	38.109	Ciona_savignyi
ENSPSIG00000006586	-	100	42.857	ENSDNOG00000047495	-	77	42.857	Dasypus_novemcinctus
ENSPSIG00000006586	-	99	39.095	ENSEBUG00000002075	-	79	39.095	Eptatretus_burgeri
ENSPSIG00000006586	-	99	38.255	ENSEBUG00000008306	-	83	37.067	Eptatretus_burgeri
ENSPSIG00000006586	-	99	36.390	ENSEBUG00000015837	-	78	36.390	Eptatretus_burgeri
ENSPSIG00000006586	-	99	37.067	ENSEBUG00000005264	-	75	37.067	Eptatretus_burgeri
ENSPSIG00000006586	-	99	37.333	ENSEBUG00000011694	-	96	38.194	Eptatretus_burgeri
ENSPSIG00000006586	-	99	40.541	ENSEBUG00000011435	-	81	42.424	Eptatretus_burgeri
ENSPSIG00000006586	-	99	43.878	ENSEBUG00000012919	-	72	43.878	Eptatretus_burgeri
ENSPSIG00000006586	-	99	34.933	ENSEBUG00000014717	-	73	35.473	Eptatretus_burgeri
ENSPSIG00000006586	-	99	33.069	ENSEBUG00000013875	-	86	37.037	Eptatretus_burgeri
ENSPSIG00000006586	-	100	44.094	ENSEASG00005004469	-	70	44.094	Equus_asinus_asinus
ENSPSIG00000006586	-	99	46.914	ENSGMOG00000018506	-	100	46.914	Gadus_morhua
ENSPSIG00000006586	-	99	44.223	ENSGALG00000046336	-	100	43.933	Gallus_gallus
ENSPSIG00000006586	-	99	39.769	ENSGALG00000055127	-	73	39.769	Gallus_gallus
ENSPSIG00000006586	-	99	42.636	ENSGALG00000054325	-	99	43.380	Gallus_gallus
ENSPSIG00000006586	-	99	42.960	ENSGALG00000044069	-	56	43.396	Gallus_gallus
ENSPSIG00000006586	-	99	36.765	ENSGALG00000049609	-	58	36.765	Gallus_gallus
ENSPSIG00000006586	-	99	39.754	ENSGALG00000053507	-	92	39.344	Gallus_gallus
ENSPSIG00000006586	-	99	47.664	ENSGACG00000006283	-	96	42.953	Gasterosteus_aculeatus
ENSPSIG00000006586	-	99	44.186	ENSGAGG00000011399	-	89	44.118	Gopherus_agassizii
ENSPSIG00000006586	-	99	42.958	ENSGAGG00000018885	-	66	40.784	Gopherus_agassizii
ENSPSIG00000006586	-	99	40.872	ENSGAGG00000011366	-	92	40.148	Gopherus_agassizii
ENSPSIG00000006586	-	99	36.890	ENSHCOG00000018201	-	81	36.890	Hippocampus_comes
ENSPSIG00000006586	-	99	42.547	ENSIPUG00000015468	-	95	42.547	Ictalurus_punctatus
ENSPSIG00000006586	-	99	41.085	ENSIPUG00000021515	-	85	41.085	Ictalurus_punctatus
ENSPSIG00000006586	-	99	34.615	ENSIPUG00000012109	ZN12	53	34.615	Ictalurus_punctatus
ENSPSIG00000006586	-	99	35.055	ENSJJAG00000023633	Zfp672	89	35.055	Jaculus_jaculus
ENSPSIG00000006586	-	99	39.601	ENSLACG00000022211	-	77	39.601	Latimeria_chalumnae
ENSPSIG00000006586	-	99	41.509	ENSLACG00000005264	-	98	38.720	Latimeria_chalumnae
ENSPSIG00000006586	-	99	36.179	ENSLACG00000009005	-	100	36.179	Latimeria_chalumnae
ENSPSIG00000006586	-	99	40.753	ENSLOCG00000017864	-	98	40.753	Lepisosteus_oculatus
ENSPSIG00000006586	-	99	41.964	ENSMGAG00000013362	-	99	40.449	Meleagris_gallopavo
ENSPSIG00000006586	-	99	35.714	ENSMAUG00000009945	Zfp672	88	35.714	Mesocricetus_auratus
ENSPSIG00000006586	-	100	42.537	ENSMMOG00000003923	-	86	42.537	Mola_mola
ENSPSIG00000006586	-	99	40.052	ENSMODG00000010532	-	87	40.052	Monodelphis_domestica
ENSPSIG00000006586	-	99	38.817	ENSMODG00000001880	-	79	38.817	Monodelphis_domestica
ENSPSIG00000006586	-	100	38.113	ENSMODG00000014052	-	100	38.113	Monodelphis_domestica
ENSPSIG00000006586	-	99	35.185	MGP_CAROLIEiJ_G0016391	Zfp672	93	43.860	Mus_caroli
ENSPSIG00000006586	-	99	51.402	MGP_CAROLIEiJ_G0030502	-	61	42.857	Mus_caroli
ENSPSIG00000006586	-	99	35.714	ENSMUSG00000049755	Zfp672	93	42.105	Mus_musculus
ENSPSIG00000006586	-	100	37.922	ENSMUSG00000030823	9130019O22Rik	71	39.718	Mus_musculus
ENSPSIG00000006586	-	100	40.830	MGP_SPRETEiJ_G0031613	-	85	40.830	Mus_spretus
ENSPSIG00000006586	-	99	35.714	MGP_SPRETEiJ_G0017233	Zfp672	93	42.105	Mus_spretus
ENSPSIG00000006586	-	100	42.254	ENSNGAG00000015777	Zim1	59	42.254	Nannospalax_galili
ENSPSIG00000006586	-	99	44.330	ENSNBRG00000007276	-	78	44.330	Neolamprologus_brichardi
ENSPSIG00000006586	-	99	38.342	ENSNBRG00000000708	-	90	38.342	Neolamprologus_brichardi
ENSPSIG00000006586	-	99	47.664	ENSORLG00020001922	-	91	47.664	Oryzias_latipes_hni
ENSPSIG00000006586	-	99	47.664	ENSOMEG00000001598	-	63	47.664	Oryzias_melastigma
ENSPSIG00000006586	-	99	38.390	ENSPREG00000002642	-	92	38.462	Poecilia_reticulata
ENSPSIG00000006586	-	99	50.833	ENSPNYG00000015486	-	55	50.833	Pundamilia_nyererei
ENSPSIG00000006586	-	99	42.500	ENSPNAG00000000088	-	90	47.222	Pygocentrus_nattereri
ENSPSIG00000006586	-	99	43.830	ENSPNAG00000018395	-	68	43.830	Pygocentrus_nattereri
ENSPSIG00000006586	-	99	35.526	ENSRNOG00000002713	Zfp672	88	35.025	Rattus_norvegicus
ENSPSIG00000006586	-	99	38.226	ENSSHAG00000018106	-	75	37.380	Sarcophilus_harrisii
ENSPSIG00000006586	-	99	38.589	ENSSFOG00015019818	-	87	35.942	Scleropages_formosus
ENSPSIG00000006586	-	99	40.940	ENSSMAG00000004252	-	89	36.667	Scophthalmus_maximus
ENSPSIG00000006586	-	99	45.385	ENSSPUG00000004366	-	59	45.385	Sphenodon_punctatus
ENSPSIG00000006586	-	99	41.623	ENSSPUG00000010016	-	92	41.623	Sphenodon_punctatus
ENSPSIG00000006586	-	99	46.667	ENSSPAG00000021653	-	84	46.667	Stegastes_partitus
ENSPSIG00000006586	-	99	56.250	ENSTGUG00000018351	-	100	56.250	Taeniopygia_guttata
ENSPSIG00000006586	-	99	42.298	ENSTGUG00000015210	-	100	44.379	Taeniopygia_guttata
ENSPSIG00000006586	-	99	40.670	ENSTRUG00000022066	-	95	40.670	Takifugu_rubripes
ENSPSIG00000006586	-	99	37.857	ENSXETG00000031192	-	100	38.057	Xenopus_tropicalis
ENSPSIG00000006586	-	99	44.255	ENSXCOG00000006553	-	89	44.395	Xiphophorus_couchianus
ENSPSIG00000006586	-	99	36.771	ENSXMAG00000026680	-	83	36.771	Xiphophorus_maculatus