EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000006606 (Gene tree)
Gene ID: 102456424
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 5425 bases
Position: chrJH205562.1:845189-850613
Accession: 102456424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000007146	MMR_HSR1	PF01926.23	8.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000007187	-	603	XM_006111977	ENSPSIP00000007146	201 (aa)	XP_006112039	K7FGI6

Gene Model

Click here to download ENSPSIG00000006606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000006606	-	76	37.013	ENSPSIG00000012698	-	89	37.013
ENSPSIG00000006606	-	78	39.375	ENSPSIG00000000469	RAB9A	79	39.375
ENSPSIG00000006606	-	95	58.421	ENSPSIG00000006831	RAB42	85	58.421
ENSPSIG00000006606	-	73	31.081	ENSPSIG00000009592	MRAS	80	30.357
ENSPSIG00000006606	-	55	39.091	ENSPSIG00000015164	RRAS2	64	39.091
ENSPSIG00000006606	-	82	42.424	ENSPSIG00000016995	RAB17	69	42.424
ENSPSIG00000006606	-	81	41.667	ENSPSIG00000010242	-	65	41.667
ENSPSIG00000006606	-	82	36.364	ENSPSIG00000014690	HRAS	92	35.393
ENSPSIG00000006606	-	94	42.021	ENSPSIG00000003919	RAB14	87	42.021
ENSPSIG00000006606	-	76	38.065	ENSPSIG00000002522	-	97	38.065
ENSPSIG00000006606	-	75	36.424	ENSPSIG00000015077	-	85	35.366
ENSPSIG00000006606	-	88	30.000	ENSPSIG00000009930	DNAJC27	66	30.000
ENSPSIG00000006606	-	83	33.136	ENSPSIG00000009545	RAB36	63	33.136
ENSPSIG00000006606	-	93	42.473	ENSPSIG00000011994	RAB2A	87	42.473
ENSPSIG00000006606	-	77	33.766	ENSPSIG00000008757	-	78	33.766
ENSPSIG00000006606	-	80	34.161	ENSPSIG00000010115	RHEB	86	34.161
ENSPSIG00000006606	-	95	37.368	ENSPSIG00000003078	RAB30	90	37.368
ENSPSIG00000006606	-	79	38.037	ENSPSIG00000011514	RAB7A	78	38.037
ENSPSIG00000006606	-	94	34.392	ENSPSIG00000009912	RAB22A	94	34.392
ENSPSIG00000006606	-	96	40.104	ENSPSIG00000008028	RAB1A	93	40.104
ENSPSIG00000006606	-	58	33.333	ENSPSIG00000014041	-	51	33.333
ENSPSIG00000006606	-	78	40.625	ENSPSIG00000001871	RAB9B	79	40.625
ENSPSIG00000006606	-	95	38.265	ENSPSIG00000011930	RAB11A	90	38.265
ENSPSIG00000006606	-	78	35.897	ENSPSIG00000015579	RAB23	70	35.119
ENSPSIG00000006606	-	85	39.181	ENSPSIG00000013143	-	78	39.181
ENSPSIG00000006606	-	82	30.723	ENSPSIG00000003221	RERG	81	30.723
ENSPSIG00000006606	-	96	35.233	ENSPSIG00000007157	RAB5A	88	35.233
ENSPSIG00000006606	-	82	37.805	ENSPSIG00000009095	RAB31	83	37.805
ENSPSIG00000006606	-	98	58.673	ENSPSIG00000009419	RAB39B	92	58.673
ENSPSIG00000006606	-	95	34.737	ENSPSIG00000013051	RAB25	89	34.737
ENSPSIG00000006606	-	99	34.634	ENSPSIG00000003388	RAB7B	98	34.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006606	-	99	63.184	ENSACIG00000016958	si:dkey-34d22.5	91	63.184	Amphilophus_citrinellus
ENSPSIG00000006606	-	99	64.179	ENSATEG00000010784	si:dkey-34d22.5	78	64.179	Anabas_testudineus
ENSPSIG00000006606	-	99	92.500	ENSCPBG00000011236	-	93	92.500	Chrysemys_picta_bellii
ENSPSIG00000006606	-	95	60.825	ENSCSEG00000019183	si:dkey-34d22.5	87	60.825	Cynoglossus_semilaevis
ENSPSIG00000006606	-	99	62.069	ENSCVAG00000017064	si:dkey-34d22.5	91	62.069	Cyprinodon_variegatus
ENSPSIG00000006606	-	87	44.828	ENSDARG00000100379	si:dkey-34d22.2	94	44.828	Danio_rerio
ENSPSIG00000006606	-	99	74.000	ENSFALG00000001373	-	93	74.000	Ficedula_albicollis
ENSPSIG00000006606	-	97	63.452	ENSFHEG00000012041	si:dkey-34d22.5	88	63.452	Fundulus_heteroclitus
ENSPSIG00000006606	-	99	75.124	ENSGALG00000000994	-	95	75.124	Gallus_gallus
ENSPSIG00000006606	-	99	60.697	ENSGAFG00000008183	si:dkey-34d22.5	91	60.697	Gambusia_affinis
ENSPSIG00000006606	-	94	91.489	ENSGAGG00000004918	-	93	91.489	Gopherus_agassizii
ENSPSIG00000006606	-	97	64.467	ENSHCOG00000015692	si:dkey-34d22.5	91	64.467	Hippocampus_comes
ENSPSIG00000006606	-	97	65.482	ENSKMAG00000012778	si:dkey-34d22.5	89	65.482	Kryptolebias_marmoratus
ENSPSIG00000006606	-	99	62.562	ENSLBEG00000002926	si:dkey-34d22.5	92	62.562	Labrus_bergylta
ENSPSIG00000006606	-	99	62.201	ENSLACG00000012674	si:dkey-34d22.5	99	62.201	Latimeria_chalumnae
ENSPSIG00000006606	-	99	66.019	ENSLOCG00000003467	si:dkey-34d22.5	96	66.019	Lepisosteus_oculatus
ENSPSIG00000006606	-	97	64.467	ENSMMOG00000006846	si:dkey-34d22.5	90	64.467	Mola_mola
ENSPSIG00000006606	-	98	63.317	ENSMALG00000013152	si:dkey-34d22.5	90	63.317	Monopterus_albus
ENSPSIG00000006606	-	99	63.317	ENSORLG00000014099	si:dkey-34d22.5	91	63.317	Oryzias_latipes
ENSPSIG00000006606	-	99	62.814	ENSORLG00020020277	si:dkey-34d22.5	91	62.814	Oryzias_latipes_hni
ENSPSIG00000006606	-	99	63.317	ENSORLG00015000142	si:dkey-34d22.5	91	63.317	Oryzias_latipes_hsok
ENSPSIG00000006606	-	99	63.682	ENSOMEG00000017958	si:dkey-34d22.5	91	63.682	Oryzias_melastigma
ENSPSIG00000006606	-	97	63.452	ENSPKIG00000021209	si:dkey-34d22.5	90	63.452	Paramormyrops_kingsleyae
ENSPSIG00000006606	-	99	64.677	ENSPMGG00000001298	-	91	64.677	Periophthalmus_magnuspinnatus
ENSPSIG00000006606	-	100	69.652	ENSPCIG00000022399	-	90	69.652	Phascolarctos_cinereus
ENSPSIG00000006606	-	99	61.692	ENSPFOG00000014499	si:dkey-34d22.5	91	61.692	Poecilia_formosa
ENSPSIG00000006606	-	99	61.692	ENSPLAG00000007773	si:dkey-34d22.5	91	61.692	Poecilia_latipinna
ENSPSIG00000006606	-	99	61.692	ENSPMEG00000012932	si:dkey-34d22.5	91	61.692	Poecilia_mexicana
ENSPSIG00000006606	-	97	68.718	ENSSHAG00000008520	-	89	68.718	Sarcophilus_harrisii
ENSPSIG00000006606	-	97	63.452	ENSSFOG00015012088	rab42	88	63.452	Scleropages_formosus
ENSPSIG00000006606	-	99	63.184	ENSSLDG00000002646	si:dkey-34d22.5	91	63.184	Seriola_lalandi_dorsalis
ENSPSIG00000006606	-	99	63.547	ENSSPAG00000012955	si:dkey-34d22.5	91	63.547	Stegastes_partitus
ENSPSIG00000006606	-	94	51.852	ENSXETG00000020622	rab39a	92	51.852	Xenopus_tropicalis
ENSPSIG00000006606	-	99	61.692	ENSXCOG00000008410	si:dkey-34d22.5	91	61.692	Xiphophorus_couchianus
ENSPSIG00000006606	-	99	61.692	ENSXMAG00000029317	si:dkey-34d22.5	91	61.692	Xiphophorus_maculatus