EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000006739 (Gene tree)
Gene ID: 102454476
Gene Symbol: PRDM12
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 18623 bases
Position: chrJH210272.1:1718488-1737110
Accession: 102454476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000007299	zf-C2H2	PF00096.26	1.4e-12	1	2
ENSPSIP00000007299	zf-C2H2	PF00096.26	1.4e-12	2	2
ENSPSIP00000007299	zf-met	PF12874.7	4.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000007340	PRDM12-201	3089	XM_006128361	ENSPSIP00000007299	354 (aa)	XP_006128423	K7FGY9

Gene Model

Click here to download ENSPSIG00000006739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000006739	PRDM12	69	38.961	ENSPSIG00000012066	PRDM4	54	38.961
ENSPSIG00000006739	PRDM12	71	40.789	ENSPSIG00000013505	PRDM5	91	40.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006739	PRDM12	94	91.916	ENSG00000130711	PRDM12	100	87.466	Homo_sapiens
ENSPSIG00000006739	PRDM12	99	67.030	ENSAPOG00000018234	-	100	67.391	Acanthochromis_polyacanthus
ENSPSIG00000006739	PRDM12	99	76.562	ENSAPOG00000016051	prdm12b	100	76.823	Acanthochromis_polyacanthus
ENSPSIG00000006739	PRDM12	91	90.402	ENSAMEG00000016234	PRDM12	99	90.402	Ailuropoda_melanoleuca
ENSPSIG00000006739	PRDM12	99	78.191	ENSACIG00000019578	prdm12b	100	78.191	Amphilophus_citrinellus
ENSPSIG00000006739	PRDM12	99	78.100	ENSACIG00000005193	-	100	78.364	Amphilophus_citrinellus
ENSPSIG00000006739	PRDM12	99	77.895	ENSAOCG00000015040	prdm12b	100	77.895	Amphiprion_ocellaris
ENSPSIG00000006739	PRDM12	99	78.515	ENSAPEG00000015092	prdm12b	100	78.515	Amphiprion_percula
ENSPSIG00000006739	PRDM12	100	73.107	ENSAPEG00000022849	-	100	74.151	Amphiprion_percula
ENSPSIG00000006739	PRDM12	95	80.994	ENSATEG00000014595	-	99	80.994	Anabas_testudineus
ENSPSIG00000006739	PRDM12	96	92.059	ENSANAG00000020616	PRDM12	100	92.059	Aotus_nancymaae
ENSPSIG00000006739	PRDM12	99	80.110	ENSACLG00000011876	prdm12b	100	80.110	Astatotilapia_calliptera
ENSPSIG00000006739	PRDM12	99	75.381	ENSACLG00000007631	-	100	76.396	Astatotilapia_calliptera
ENSPSIG00000006739	PRDM12	99	82.432	ENSAMXG00000033665	prdm12b	100	84.324	Astyanax_mexicanus
ENSPSIG00000006739	PRDM12	99	80.556	ENSAMXG00000008540	PRDM12	100	80.556	Astyanax_mexicanus
ENSPSIG00000006739	PRDM12	94	92.515	ENSBTAG00000023797	PRDM12	100	89.474	Bos_taurus
ENSPSIG00000006739	PRDM12	94	92.216	ENSCJAG00000020540	PRDM12	100	89.444	Callithrix_jacchus
ENSPSIG00000006739	PRDM12	82	92.096	ENSCAFG00000023076	PRDM12	99	87.850	Canis_familiaris
ENSPSIG00000006739	PRDM12	94	92.814	ENSCAFG00020024046	PRDM12	100	89.011	Canis_lupus_dingo
ENSPSIG00000006739	PRDM12	94	92.814	ENSCHIG00000025005	PRDM12	100	89.503	Capra_hircus
ENSPSIG00000006739	PRDM12	88	92.971	ENSCPOG00000005901	PRDM12	95	92.971	Cavia_porcellus
ENSPSIG00000006739	PRDM12	94	92.216	ENSCCAG00000037485	PRDM12	100	88.705	Cebus_capucinus
ENSPSIG00000006739	PRDM12	94	92.216	ENSCATG00000020327	PRDM12	100	88.705	Cercocebus_atys
ENSPSIG00000006739	PRDM12	94	92.515	ENSCLAG00000005499	PRDM12	92	92.515	Chinchilla_lanigera
ENSPSIG00000006739	PRDM12	94	92.216	ENSCSAG00000014756	PRDM12	100	88.462	Chlorocebus_sabaeus
ENSPSIG00000006739	PRDM12	100	97.740	ENSCPBG00000022628	PRDM12	100	97.740	Chrysemys_picta_bellii
ENSPSIG00000006739	PRDM12	94	92.814	ENSCGRG00001015005	Prdm12	100	88.525	Cricetulus_griseus_chok1gshd
ENSPSIG00000006739	PRDM12	99	78.437	ENSCVAG00000017166	prdm12b	100	79.515	Cyprinodon_variegatus
ENSPSIG00000006739	PRDM12	99	74.615	ENSCVAG00000000944	-	100	75.128	Cyprinodon_variegatus
ENSPSIG00000006739	PRDM12	99	84.699	ENSDARG00000007430	prdm12b	100	84.699	Danio_rerio
ENSPSIG00000006739	PRDM12	94	91.916	ENSDNOG00000042302	PRDM12	99	88.920	Dasypus_novemcinctus
ENSPSIG00000006739	PRDM12	88	64.118	ENSEBUG00000016780	prdm12b	75	65.588	Eptatretus_burgeri
ENSPSIG00000006739	PRDM12	96	92.647	ENSEASG00005008472	PRDM12	100	89.503	Equus_asinus_asinus
ENSPSIG00000006739	PRDM12	96	92.353	ENSECAG00000005933	PRDM12	100	89.227	Equus_caballus
ENSPSIG00000006739	PRDM12	99	83.019	ENSELUG00000009905	prdm12b	100	83.019	Esox_lucius
ENSPSIG00000006739	PRDM12	99	79.167	ENSELUG00000013674	PRDM12	99	79.167	Esox_lucius
ENSPSIG00000006739	PRDM12	94	92.814	ENSFCAG00000043086	PRDM12	100	89.256	Felis_catus
ENSPSIG00000006739	PRDM12	100	96.328	ENSFALG00000001445	PRDM12	89	96.328	Ficedula_albicollis
ENSPSIG00000006739	PRDM12	99	76.744	ENSFHEG00000007746	-	100	77.003	Fundulus_heteroclitus
ENSPSIG00000006739	PRDM12	99	78.075	ENSFHEG00000003944	prdm12b	100	78.723	Fundulus_heteroclitus
ENSPSIG00000006739	PRDM12	99	81.073	ENSGMOG00000011797	prdm12b	99	81.073	Gadus_morhua
ENSPSIG00000006739	PRDM12	100	96.328	ENSGALG00000003895	PRDM12	100	96.328	Gallus_gallus
ENSPSIG00000006739	PRDM12	100	77.778	ENSGAFG00000010827	prdm12b	100	79.101	Gambusia_affinis
ENSPSIG00000006739	PRDM12	100	79.301	ENSGACG00000016713	prdm12b	100	79.301	Gasterosteus_aculeatus
ENSPSIG00000006739	PRDM12	100	97.740	ENSGAGG00000014083	PRDM12	100	97.740	Gopherus_agassizii
ENSPSIG00000006739	PRDM12	94	91.617	ENSGGOG00000010568	PRDM12	100	87.432	Gorilla_gorilla
ENSPSIG00000006739	PRDM12	99	78.610	ENSHBUG00000022878	prdm12b	100	78.610	Haplochromis_burtoni
ENSPSIG00000006739	PRDM12	99	75.381	ENSHBUG00000022537	-	93	76.396	Haplochromis_burtoni
ENSPSIG00000006739	PRDM12	94	91.916	ENSHGLG00000013939	PRDM12	100	87.671	Heterocephalus_glaber_female
ENSPSIG00000006739	PRDM12	99	76.243	ENSHCOG00000021167	-	100	76.243	Hippocampus_comes
ENSPSIG00000006739	PRDM12	92	80.702	ENSHCOG00000003663	prdm12b	100	73.980	Hippocampus_comes
ENSPSIG00000006739	PRDM12	99	77.198	ENSIPUG00000019544	PRDM12	100	77.198	Ictalurus_punctatus
ENSPSIG00000006739	PRDM12	99	83.696	ENSIPUG00000017053	prdm12b	100	83.967	Ictalurus_punctatus
ENSPSIG00000006739	PRDM12	95	93.195	ENSSTOG00000005986	PRDM12	88	93.195	Ictidomys_tridecemlineatus
ENSPSIG00000006739	PRDM12	93	93.333	ENSJJAG00000005424	Prdm12	100	93.333	Jaculus_jaculus
ENSPSIG00000006739	PRDM12	99	80.112	ENSKMAG00000021205	-	99	80.112	Kryptolebias_marmoratus
ENSPSIG00000006739	PRDM12	99	73.020	ENSKMAG00000016921	prdm12b	100	73.515	Kryptolebias_marmoratus
ENSPSIG00000006739	PRDM12	99	77.778	ENSLBEG00000017769	prdm12b	100	78.307	Labrus_bergylta
ENSPSIG00000006739	PRDM12	99	76.579	ENSLBEG00000007776	-	100	77.105	Labrus_bergylta
ENSPSIG00000006739	PRDM12	99	91.501	ENSLACG00000017560	PRDM12	99	91.501	Latimeria_chalumnae
ENSPSIG00000006739	PRDM12	99	85.950	ENSLOCG00000005429	prdm12b	99	86.501	Lepisosteus_oculatus
ENSPSIG00000006739	PRDM12	94	91.176	ENSLAFG00000006979	PRDM12	93	91.066	Loxodonta_africana
ENSPSIG00000006739	PRDM12	100	85.831	ENSMFAG00000040322	PRDM12	100	88.011	Macaca_fascicularis
ENSPSIG00000006739	PRDM12	94	92.216	ENSMNEG00000037234	PRDM12	100	88.705	Macaca_nemestrina
ENSPSIG00000006739	PRDM12	99	78.933	ENSMAMG00000013212	prdm12b	100	79.467	Mastacembelus_armatus
ENSPSIG00000006739	PRDM12	99	76.031	ENSMAMG00000018988	-	100	76.546	Mastacembelus_armatus
ENSPSIG00000006739	PRDM12	99	75.000	ENSMZEG00005000415	PRDM12	100	76.010	Maylandia_zebra
ENSPSIG00000006739	PRDM12	98	96.264	ENSMGAG00000005438	PRDM12	98	96.264	Meleagris_gallopavo
ENSPSIG00000006739	PRDM12	100	88.767	ENSMAUG00000013040	Prdm12	100	88.767	Mesocricetus_auratus
ENSPSIG00000006739	PRDM12	96	92.375	ENSMICG00000015480	PRDM12	100	89.227	Microcebus_murinus
ENSPSIG00000006739	PRDM12	99	91.168	ENSMOCG00000021026	Prdm12	93	92.962	Microtus_ochrogaster
ENSPSIG00000006739	PRDM12	100	94.648	ENSMODG00000012108	PRDM12	100	94.648	Monodelphis_domestica
ENSPSIG00000006739	PRDM12	99	67.925	ENSMALG00000021901	prdm12b	99	67.925	Monopterus_albus
ENSPSIG00000006739	PRDM12	94	92.515	MGP_CAROLIEiJ_G0023414	Prdm12	100	88.493	Mus_caroli
ENSPSIG00000006739	PRDM12	94	92.515	ENSMUSG00000079466	Prdm12	100	88.493	Mus_musculus
ENSPSIG00000006739	PRDM12	94	92.515	MGP_PahariEiJ_G0024871	Prdm12	100	88.493	Mus_pahari
ENSPSIG00000006739	PRDM12	94	92.515	MGP_SPRETEiJ_G0024331	Prdm12	100	88.493	Mus_spretus
ENSPSIG00000006739	PRDM12	92	93.272	ENSNGAG00000018480	Prdm12	100	88.827	Nannospalax_galili
ENSPSIG00000006739	PRDM12	99	77.984	ENSNBRG00000006727	prdm12b	100	77.984	Neolamprologus_brichardi
ENSPSIG00000006739	PRDM12	99	75.549	ENSNBRG00000024312	-	100	76.099	Neolamprologus_brichardi
ENSPSIG00000006739	PRDM12	100	83.944	ENSMEUG00000003828	PRDM12	100	83.944	Notamacropus_eugenii
ENSPSIG00000006739	PRDM12	93	91.818	ENSOPRG00000008680	PRDM12	100	91.818	Ochotona_princeps
ENSPSIG00000006739	PRDM12	96	92.669	ENSODEG00000016282	PRDM12	64	92.669	Octodon_degus
ENSPSIG00000006739	PRDM12	61	95.392	ENSOANG00000001043	PRDM12	100	95.392	Ornithorhynchus_anatinus
ENSPSIG00000006739	PRDM12	88	87.859	ENSOCUG00000008241	PRDM12	100	87.859	Oryctolagus_cuniculus
ENSPSIG00000006739	PRDM12	100	77.309	ENSORLG00000007114	prdm12b	100	77.573	Oryzias_latipes
ENSPSIG00000006739	PRDM12	99	73.333	ENSORLG00000017558	-	100	75.641	Oryzias_latipes
ENSPSIG00000006739	PRDM12	99	73.402	ENSORLG00020013167	-	100	75.448	Oryzias_latipes_hni
ENSPSIG00000006739	PRDM12	100	75.853	ENSORLG00020019565	prdm12b	100	76.903	Oryzias_latipes_hni
ENSPSIG00000006739	PRDM12	99	73.333	ENSORLG00015003435	-	100	75.641	Oryzias_latipes_hsok
ENSPSIG00000006739	PRDM12	100	76.517	ENSORLG00015007621	prdm12b	100	77.573	Oryzias_latipes_hsok
ENSPSIG00000006739	PRDM12	99	77.454	ENSOMEG00000007762	-	100	77.719	Oryzias_melastigma
ENSPSIG00000006739	PRDM12	100	75.979	ENSOMEG00000004134	prdm12b	100	76.762	Oryzias_melastigma
ENSPSIG00000006739	PRDM12	94	92.793	ENSOGAG00000007557	PRDM12	100	92.793	Otolemur_garnettii
ENSPSIG00000006739	PRDM12	83	89.761	ENSPPAG00000031506	-	99	89.761	Pan_paniscus
ENSPSIG00000006739	PRDM12	100	81.894	ENSPPRG00000023024	PRDM12	92	81.894	Panthera_pardus
ENSPSIG00000006739	PRDM12	94	91.916	ENSPTRG00000043324	-	100	87.705	Pan_troglodytes
ENSPSIG00000006739	PRDM12	94	91.916	ENSPTRG00000021475	PRDM12	100	87.705	Pan_troglodytes
ENSPSIG00000006739	PRDM12	94	92.216	ENSPANG00000025967	PRDM12	100	88.705	Papio_anubis
ENSPSIG00000006739	PRDM12	97	77.401	ENSPKIG00000004305	PRDM12	99	77.778	Paramormyrops_kingsleyae
ENSPSIG00000006739	PRDM12	99	83.871	ENSPKIG00000007228	prdm12b	100	84.140	Paramormyrops_kingsleyae
ENSPSIG00000006739	PRDM12	99	75.457	ENSPMGG00000002356	-	100	75.457	Periophthalmus_magnuspinnatus
ENSPSIG00000006739	PRDM12	100	79.620	ENSPMGG00000008867	prdm12b	100	80.163	Periophthalmus_magnuspinnatus
ENSPSIG00000006739	PRDM12	94	92.771	ENSPEMG00000009969	Prdm12	96	89.205	Peromyscus_maniculatus_bairdii
ENSPSIG00000006739	PRDM12	100	94.648	ENSPCIG00000024119	PRDM12	100	94.648	Phascolarctos_cinereus
ENSPSIG00000006739	PRDM12	99	80.054	ENSPFOG00000019841	prdm12b	100	80.054	Poecilia_formosa
ENSPSIG00000006739	PRDM12	100	77.165	ENSPLAG00000016626	prdm12b	100	78.478	Poecilia_latipinna
ENSPSIG00000006739	PRDM12	97	77.089	ENSPMEG00000016698	prdm12b	100	77.898	Poecilia_mexicana
ENSPSIG00000006739	PRDM12	100	76.963	ENSPREG00000015073	prdm12b	100	78.534	Poecilia_reticulata
ENSPSIG00000006739	PRDM12	95	76.522	ENSPREG00000003211	-	94	76.522	Poecilia_reticulata
ENSPSIG00000006739	PRDM12	97	90.698	ENSPPYG00000019694	PRDM12	98	90.698	Pongo_abelii
ENSPSIG00000006739	PRDM12	94	92.814	ENSPCOG00000022255	PRDM12	100	88.798	Propithecus_coquereli
ENSPSIG00000006739	PRDM12	94	92.814	ENSPVAG00000001511	PRDM12	100	88.525	Pteropus_vampyrus
ENSPSIG00000006739	PRDM12	99	75.000	ENSPNYG00000013589	-	100	76.010	Pundamilia_nyererei
ENSPSIG00000006739	PRDM12	99	77.926	ENSPNYG00000009607	prdm12b	100	77.926	Pundamilia_nyererei
ENSPSIG00000006739	PRDM12	99	84.239	ENSPNAG00000024532	prdm12b	100	85.326	Pygocentrus_nattereri
ENSPSIG00000006739	PRDM12	99	75.472	ENSPNAG00000013396	PRDM12	100	76.550	Pygocentrus_nattereri
ENSPSIG00000006739	PRDM12	94	92.515	ENSRNOG00000009218	Prdm12	100	88.493	Rattus_norvegicus
ENSPSIG00000006739	PRDM12	90	92.744	ENSRBIG00000042712	PRDM12	98	85.434	Rhinopithecus_bieti
ENSPSIG00000006739	PRDM12	91	92.835	ENSRROG00000043554	PRDM12	100	92.835	Rhinopithecus_roxellana
ENSPSIG00000006739	PRDM12	100	93.820	ENSSHAG00000015972	PRDM12	100	93.820	Sarcophilus_harrisii
ENSPSIG00000006739	PRDM12	99	75.321	ENSSMAG00000003754	prdm12b	100	76.093	Scophthalmus_maximus
ENSPSIG00000006739	PRDM12	96	80.466	ENSSDUG00000019071	-	100	77.807	Seriola_dumerili
ENSPSIG00000006739	PRDM12	99	78.385	ENSSDUG00000023498	prdm12b	100	78.385	Seriola_dumerili
ENSPSIG00000006739	PRDM12	99	81.461	ENSSLDG00000013562	-	100	81.742	Seriola_lalandi_dorsalis
ENSPSIG00000006739	PRDM12	99	78.478	ENSSLDG00000009557	prdm12b	100	78.478	Seriola_lalandi_dorsalis
ENSPSIG00000006739	PRDM12	100	96.045	ENSSPUG00000013424	PRDM12	100	96.045	Sphenodon_punctatus
ENSPSIG00000006739	PRDM12	99	67.876	ENSSPAG00000022420	-	100	69.430	Stegastes_partitus
ENSPSIG00000006739	PRDM12	99	77.428	ENSSPAG00000018824	prdm12b	100	78.478	Stegastes_partitus
ENSPSIG00000006739	PRDM12	94	92.814	ENSSSCG00000005703	PRDM12	100	89.011	Sus_scrofa
ENSPSIG00000006739	PRDM12	99	78.670	ENSTRUG00000013239	-	100	78.670	Takifugu_rubripes
ENSPSIG00000006739	PRDM12	99	79.189	ENSTRUG00000018659	prdm12b	100	79.459	Takifugu_rubripes
ENSPSIG00000006739	PRDM12	99	78.649	ENSTNIG00000009020	prdm12b	99	79.459	Tetraodon_nigroviridis
ENSPSIG00000006739	PRDM12	99	77.095	ENSTNIG00000005859	-	99	77.095	Tetraodon_nigroviridis
ENSPSIG00000006739	PRDM12	94	92.814	ENSUAMG00000009653	PRDM12	94	92.082	Ursus_americanus
ENSPSIG00000006739	PRDM12	94	92.771	ENSVVUG00000027662	PRDM12	79	92.771	Vulpes_vulpes
ENSPSIG00000006739	PRDM12	100	78.191	ENSXCOG00000002836	prdm12b	100	79.255	Xiphophorus_couchianus
ENSPSIG00000006739	PRDM12	99	77.867	ENSXMAG00000005537	prdm12b	100	78.933	Xiphophorus_maculatus
ENSPSIG00000006739	PRDM12	99	75.196	ENSXMAG00000028012	-	100	75.718	Xiphophorus_maculatus