EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000006831 (Gene tree)
Gene ID: 102456000
Gene Symbol: RAB42
Alias: -
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 8961 bases
Position: chrJH205562.1:852064-861024
Accession: 102456000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000007409	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000007450	RAB42-201	4643	XM_006111975	ENSPSIP00000007409	223 (aa)	XP_006112037	K7FH99

Gene Model

Click here to download ENSPSIG00000006831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000006831	RAB42	74	33.537	ENSPSIG00000009912	RAB22A	84	33.537
ENSPSIG00000006831	RAB42	83	56.452	ENSPSIG00000009419	RAB39B	87	56.452
ENSPSIG00000006831	RAB42	74	33.939	ENSPSIG00000009095	RAB31	83	33.939
ENSPSIG00000006831	RAB42	70	40.994	ENSPSIG00000000469	RAB9A	79	40.994
ENSPSIG00000006831	RAB42	74	30.303	ENSPSIG00000001290	-	78	30.303
ENSPSIG00000006831	RAB42	68	33.775	ENSPSIG00000014690	HRAS	85	32.927
ENSPSIG00000006831	RAB42	60	30.597	ENSPSIG00000003938	ARL3	70	30.597
ENSPSIG00000006831	RAB42	75	34.483	ENSPSIG00000003388	RAB7B	84	34.483
ENSPSIG00000006831	RAB42	85	58.421	ENSPSIG00000006606	-	95	58.421
ENSPSIG00000006831	RAB42	68	30.464	ENSPSIG00000014041	-	64	30.464
ENSPSIG00000006831	RAB42	68	33.974	ENSPSIG00000012698	-	89	33.974
ENSPSIG00000006831	RAB42	72	32.099	ENSPSIG00000003221	RERG	79	32.099
ENSPSIG00000006831	RAB42	51	36.842	ENSPSIG00000015164	RRAS2	66	36.842
ENSPSIG00000006831	RAB42	67	39.474	ENSPSIG00000002522	-	95	39.474
ENSPSIG00000006831	RAB42	66	30.968	ENSPSIG00000011613	RASL11A	64	30.968
ENSPSIG00000006831	RAB42	85	39.153	ENSPSIG00000011930	RAB11A	83	39.560
ENSPSIG00000006831	RAB42	70	32.051	ENSPSIG00000009592	MRAS	92	30.928
ENSPSIG00000006831	RAB42	80	41.341	ENSPSIG00000003078	RAB30	87	41.341
ENSPSIG00000006831	RAB42	79	35.912	ENSPSIG00000008757	-	91	35.912
ENSPSIG00000006831	RAB42	88	35.533	ENSPSIG00000016995	RAB17	82	35.533
ENSPSIG00000006831	RAB42	71	36.709	ENSPSIG00000015579	RAB23	74	34.831
ENSPSIG00000006831	RAB42	76	42.045	ENSPSIG00000010242	-	68	42.045
ENSPSIG00000006831	RAB42	82	34.555	ENSPSIG00000007157	RAB5A	88	34.555
ENSPSIG00000006831	RAB42	82	38.251	ENSPSIG00000013143	-	84	38.251
ENSPSIG00000006831	RAB42	75	33.533	ENSPSIG00000010115	RHEB	88	33.533
ENSPSIG00000006831	RAB42	78	33.908	ENSPSIG00000015077	-	97	34.225
ENSPSIG00000006831	RAB42	79	30.337	ENSPSIG00000009545	RAB36	67	30.337
ENSPSIG00000006831	RAB42	70	41.615	ENSPSIG00000001871	RAB9B	79	41.615
ENSPSIG00000006831	RAB42	77	43.605	ENSPSIG00000008028	RAB1A	83	43.605
ENSPSIG00000006831	RAB42	94	35.407	ENSPSIG00000013051	RAB25	95	35.407
ENSPSIG00000006831	RAB42	71	37.423	ENSPSIG00000011514	RAB7A	78	37.423
ENSPSIG00000006831	RAB42	94	42.326	ENSPSIG00000003919	RAB14	97	42.326
ENSPSIG00000006831	RAB42	84	44.920	ENSPSIG00000011994	RAB2A	87	44.920

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006831	RAB42	92	60.287	ENSANAG00000035487	-	97	60.287	Aotus_nancymaae
ENSPSIG00000006831	RAB42	94	61.290	ENSBTAG00000021525	-	99	61.290	Bos_taurus
ENSPSIG00000006831	RAB42	92	96.585	ENSCPBG00000011245	RAB42	99	96.569	Chrysemys_picta_bellii
ENSPSIG00000006831	RAB42	92	61.905	ENSCGRG00001019426	Rab42	97	61.905	Cricetulus_griseus_chok1gshd
ENSPSIG00000006831	RAB42	92	59.809	ENSDORG00000023607	Rab42	97	59.809	Dipodomys_ordii
ENSPSIG00000006831	RAB42	93	62.264	ENSFCAG00000037124	-	97	62.264	Felis_catus
ENSPSIG00000006831	RAB42	92	94.146	ENSGAGG00000004921	RAB42	99	94.146	Gopherus_agassizii
ENSPSIG00000006831	RAB42	92	60.377	ENSSTOG00000000084	-	97	60.377	Ictidomys_tridecemlineatus
ENSPSIG00000006831	RAB42	92	62.085	ENSMAUG00000020223	Rab42	97	62.085	Mesocricetus_auratus
ENSPSIG00000006831	RAB42	94	61.860	ENSMICG00000029915	-	99	62.791	Microcebus_murinus
ENSPSIG00000006831	RAB42	92	62.857	ENSMOCG00000021639	Rab42	97	62.857	Microtus_ochrogaster
ENSPSIG00000006831	RAB42	93	59.809	ENSMODG00000023873	-	95	59.809	Monodelphis_domestica
ENSPSIG00000006831	RAB42	92	62.500	ENSNGAG00000015676	Rab42	97	62.500	Nannospalax_galili
ENSPSIG00000006831	RAB42	94	61.395	ENSOGAG00000006951	-	99	61.395	Otolemur_garnettii
ENSPSIG00000006831	RAB42	94	60.000	ENSPCOG00000008605	-	99	61.395	Propithecus_coquereli
ENSPSIG00000006831	RAB42	92	61.650	ENSSARG00000007565	-	100	61.650	Sorex_araneus
ENSPSIG00000006831	RAB42	91	88.293	ENSSPUG00000010337	RAB42	96	88.293	Sphenodon_punctatus
ENSPSIG00000006831	RAB42	94	59.908	ENSSSCG00000030432	-	99	59.908	Sus_scrofa