EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000006864 (Gene tree)
Gene ID: 102456912
Gene Symbol: TRNAU1AP
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 17055 bases
Position: chrJH205562.1:877855-894909
Accession: 102456912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000007450	RRM_1	PF00076.22	7.8e-25	1	2
ENSPSIP00000007450	RRM_1	PF00076.22	7.8e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000007491	TRNAU1AP-201	2717	XM_006111978	ENSPSIP00000007450	274 (aa)	XP_006112042	K7FHE0

Gene Model

Click here to download ENSPSIG00000006864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000006864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000006864	TRNAU1AP	70	31.897	ENSPSIG00000003719	PABPC1	55	31.897
ENSPSIG00000006864	TRNAU1AP	70	50.000	ENSPSIG00000004189	-	78	50.000
ENSPSIG00000006864	TRNAU1AP	52	30.000	ENSPSIG00000009565	SF3B4	51	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSG00000180098	TRNAU1AP	95	95.255	Homo_sapiens
ENSPSIG00000006864	TRNAU1AP	99	58.644	ENSAPOG00000007148	TRNAU1AP	98	58.305	Acanthochromis_polyacanthus
ENSPSIG00000006864	TRNAU1AP	100	94.161	ENSAMEG00000011367	TRNAU1AP	95	94.161	Ailuropoda_melanoleuca
ENSPSIG00000006864	TRNAU1AP	92	69.737	ENSACIG00000004161	trnau1apa	94	59.441	Amphilophus_citrinellus
ENSPSIG00000006864	TRNAU1AP	99	58.276	ENSAOCG00000008056	trnau1apa	94	58.703	Amphiprion_ocellaris
ENSPSIG00000006864	TRNAU1AP	99	58.276	ENSAPEG00000008868	trnau1apa	94	58.703	Amphiprion_percula
ENSPSIG00000006864	TRNAU1AP	99	56.623	ENSATEG00000012140	trnau1apa	95	56.333	Anabas_testudineus
ENSPSIG00000006864	TRNAU1AP	96	96.565	ENSAPLG00000002606	TRNAU1AP	96	96.565	Anas_platyrhynchos
ENSPSIG00000006864	TRNAU1AP	70	51.042	ENSACAG00000004205	-	73	51.042	Anolis_carolinensis
ENSPSIG00000006864	TRNAU1AP	99	79.562	ENSACAG00000003995	-	95	79.562	Anolis_carolinensis
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSANAG00000018976	TRNAU1AP	95	95.255	Aotus_nancymaae
ENSPSIG00000006864	TRNAU1AP	99	60.345	ENSACLG00000018515	trnau1apa	94	60.345	Astatotilapia_calliptera
ENSPSIG00000006864	TRNAU1AP	96	67.089	ENSAMXG00000029240	-	97	67.089	Astyanax_mexicanus
ENSPSIG00000006864	TRNAU1AP	96	57.778	ENSAMXG00000013750	trnau1apa	87	55.926	Astyanax_mexicanus
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSBTAG00000010393	TRNAU1AP	95	94.891	Bos_taurus
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSCJAG00000009717	TRNAU1AP	95	95.255	Callithrix_jacchus
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSCAFG00000011735	TRNAU1AP	95	94.891	Canis_familiaris
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSCAFG00020023584	TRNAU1AP	95	94.891	Canis_lupus_dingo
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSCHIG00000023215	TRNAU1AP	95	94.891	Capra_hircus
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSTSYG00000003506	TRNAU1AP	95	94.891	Carlito_syrichta
ENSPSIG00000006864	TRNAU1AP	100	94.526	ENSCPOG00000001925	TRNAU1AP	95	94.526	Cavia_porcellus
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSCCAG00000037506	TRNAU1AP	95	95.255	Cebus_capucinus
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSCATG00000044617	TRNAU1AP	95	94.891	Cercocebus_atys
ENSPSIG00000006864	TRNAU1AP	100	94.161	ENSCLAG00000008223	TRNAU1AP	95	94.161	Chinchilla_lanigera
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSCSAG00000001014	TRNAU1AP	95	94.891	Chlorocebus_sabaeus
ENSPSIG00000006864	TRNAU1AP	100	98.175	ENSCPBG00000000121	TRNAU1AP	100	98.175	Chrysemys_picta_bellii
ENSPSIG00000006864	TRNAU1AP	60	52.121	ENSCSAVG00000011781	-	87	52.121	Ciona_savignyi
ENSPSIG00000006864	TRNAU1AP	100	82.847	ENSCANG00000041949	TRNAU1AP	100	94.350	Colobus_angolensis_palliatus
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSCGRG00001004713	Trnau1ap	95	95.255	Cricetulus_griseus_chok1gshd
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSCGRG00000014532	Trnau1ap	95	95.255	Cricetulus_griseus_crigri
ENSPSIG00000006864	TRNAU1AP	98	56.747	ENSCSEG00000006663	trnau1apa	92	59.170	Cynoglossus_semilaevis
ENSPSIG00000006864	TRNAU1AP	96	59.489	ENSCVAG00000018069	trnau1apa	94	58.242	Cyprinodon_variegatus
ENSPSIG00000006864	TRNAU1AP	96	51.481	ENSDARG00000101323	trnau1apa	85	49.815	Danio_rerio
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSDNOG00000033009	TRNAU1AP	95	94.891	Dasypus_novemcinctus
ENSPSIG00000006864	TRNAU1AP	66	78.333	ENSDNOG00000047959	-	92	79.096	Dasypus_novemcinctus
ENSPSIG00000006864	TRNAU1AP	100	89.781	ENSDORG00000006349	Trnau1ap	94	96.330	Dipodomys_ordii
ENSPSIG00000006864	TRNAU1AP	89	91.020	ENSETEG00000012594	TRNAU1AP	100	91.020	Echinops_telfairi
ENSPSIG00000006864	TRNAU1AP	53	57.500	ENSEBUG00000006349	-	60	57.500	Eptatretus_burgeri
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSEASG00005010062	TRNAU1AP	95	95.255	Equus_asinus_asinus
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSECAG00000012980	TRNAU1AP	95	95.255	Equus_caballus
ENSPSIG00000006864	TRNAU1AP	97	61.649	ENSELUG00000017686	trnau1apa	94	61.232	Esox_lucius
ENSPSIG00000006864	TRNAU1AP	96	70.238	ENSELUG00000022790	-	94	50.370	Esox_lucius
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSFCAG00000013401	TRNAU1AP	95	95.255	Felis_catus
ENSPSIG00000006864	TRNAU1AP	100	95.985	ENSFALG00000001371	TRNAU1AP	100	95.985	Ficedula_albicollis
ENSPSIG00000006864	TRNAU1AP	100	94.161	ENSFDAG00000018599	TRNAU1AP	95	94.161	Fukomys_damarensis
ENSPSIG00000006864	TRNAU1AP	79	59.916	ENSFHEG00000018232	trnau1apa	86	56.972	Fundulus_heteroclitus
ENSPSIG00000006864	TRNAU1AP	96	53.455	ENSGMOG00000016508	trnau1apa	89	55.474	Gadus_morhua
ENSPSIG00000006864	TRNAU1AP	100	95.985	ENSGALG00000001310	-	95	95.985	Gallus_gallus
ENSPSIG00000006864	TRNAU1AP	71	49.296	ENSGALG00000012721	C2H6orf52	95	44.788	Gallus_gallus
ENSPSIG00000006864	TRNAU1AP	78	57.826	ENSGAFG00000004928	trnau1apa	91	56.667	Gambusia_affinis
ENSPSIG00000006864	TRNAU1AP	98	58.719	ENSGACG00000001443	trnau1apa	92	58.363	Gasterosteus_aculeatus
ENSPSIG00000006864	TRNAU1AP	100	98.540	ENSGAGG00000004940	TRNAU1AP	100	98.540	Gopherus_agassizii
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSGGOG00000003511	TRNAU1AP	95	95.255	Gorilla_gorilla
ENSPSIG00000006864	TRNAU1AP	99	59.322	ENSHBUG00000002510	trnau1apa	94	59.322	Haplochromis_burtoni
ENSPSIG00000006864	TRNAU1AP	100	93.796	ENSHGLG00000010380	TRNAU1AP	95	93.796	Heterocephalus_glaber_female
ENSPSIG00000006864	TRNAU1AP	99	93.727	ENSHGLG00100012699	TRNAU1AP	95	94.074	Heterocephalus_glaber_male
ENSPSIG00000006864	TRNAU1AP	100	56.552	ENSHCOG00000014770	trnau1apa	94	55.517	Hippocampus_comes
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSSTOG00000000079	TRNAU1AP	95	95.255	Ictidomys_tridecemlineatus
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSJJAG00000010128	Trnau1ap	95	94.891	Jaculus_jaculus
ENSPSIG00000006864	TRNAU1AP	96	60.000	ENSKMAG00000001230	trnau1apa	90	58.123	Kryptolebias_marmoratus
ENSPSIG00000006864	TRNAU1AP	96	60.284	ENSLBEG00000011683	trnau1apa	90	60.424	Labrus_bergylta
ENSPSIG00000006864	TRNAU1AP	100	72.628	ENSLACG00000005541	TRNAU1AP	95	72.628	Latimeria_chalumnae
ENSPSIG00000006864	TRNAU1AP	99	73.091	ENSLOCG00000004041	trnau1apa	95	72.364	Lepisosteus_oculatus
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSLAFG00000007628	TRNAU1AP	95	95.255	Loxodonta_africana
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSMFAG00000043751	TRNAU1AP	95	94.891	Macaca_fascicularis
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSMMUG00000006561	TRNAU1AP	95	94.891	Macaca_mulatta
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSMNEG00000044201	TRNAU1AP	95	94.891	Macaca_nemestrina
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSMLEG00000015649	TRNAU1AP	95	94.891	Mandrillus_leucophaeus
ENSPSIG00000006864	TRNAU1AP	99	58.099	ENSMAMG00000001247	trnau1apa	94	58.273	Mastacembelus_armatus
ENSPSIG00000006864	TRNAU1AP	99	60.345	ENSMZEG00005017722	trnau1apa	94	60.345	Maylandia_zebra
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSMGAG00000002105	TRNAU1AP	99	95.255	Meleagris_gallopavo
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSMICG00000008386	TRNAU1AP	100	93.785	Microcebus_murinus
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSMOCG00000011189	Trnau1ap	95	94.891	Microtus_ochrogaster
ENSPSIG00000006864	TRNAU1AP	95	57.854	ENSMMOG00000012107	trnau1apa	88	57.854	Mola_mola
ENSPSIG00000006864	TRNAU1AP	100	92.336	ENSMODG00000010927	TRNAU1AP	95	92.336	Monodelphis_domestica
ENSPSIG00000006864	TRNAU1AP	96	58.007	ENSMALG00000016778	trnau1apa	90	58.099	Monopterus_albus
ENSPSIG00000006864	TRNAU1AP	100	94.161	MGP_CAROLIEiJ_G0026563	Trnau1ap	98	96.203	Mus_caroli
ENSPSIG00000006864	TRNAU1AP	100	94.161	ENSMUSG00000028898	Trnau1ap	98	96.203	Mus_musculus
ENSPSIG00000006864	TRNAU1AP	100	94.526	MGP_PahariEiJ_G0028896	Trnau1ap	98	96.203	Mus_pahari
ENSPSIG00000006864	TRNAU1AP	100	93.796	MGP_SPRETEiJ_G0027544	Trnau1ap	98	96.203	Mus_spretus
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSMPUG00000015511	TRNAU1AP	95	95.255	Mustela_putorius_furo
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSMLUG00000012586	TRNAU1AP	95	94.891	Myotis_lucifugus
ENSPSIG00000006864	TRNAU1AP	100	94.161	ENSNGAG00000015881	Trnau1ap	95	94.161	Nannospalax_galili
ENSPSIG00000006864	TRNAU1AP	99	56.786	ENSNBRG00000001758	trnau1apa	94	56.786	Neolamprologus_brichardi
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSNLEG00000009822	TRNAU1AP	95	95.255	Nomascus_leucogenys
ENSPSIG00000006864	TRNAU1AP	100	91.241	ENSMEUG00000006117	TRNAU1AP	99	91.241	Notamacropus_eugenii
ENSPSIG00000006864	TRNAU1AP	69	89.091	ENSOPRG00000007084	-	65	89.091	Ochotona_princeps
ENSPSIG00000006864	TRNAU1AP	100	94.161	ENSODEG00000002970	TRNAU1AP	95	94.161	Octodon_degus
ENSPSIG00000006864	TRNAU1AP	82	58.776	ENSONIG00000004715	trnau1apa	94	60.581	Oreochromis_niloticus
ENSPSIG00000006864	TRNAU1AP	100	73.913	ENSOANG00000005325	-	95	73.913	Ornithorhynchus_anatinus
ENSPSIG00000006864	TRNAU1AP	100	73.818	ENSOCUG00000002353	-	95	72.438	Oryctolagus_cuniculus
ENSPSIG00000006864	TRNAU1AP	100	93.066	ENSOCUG00000011704	-	95	93.066	Oryctolagus_cuniculus
ENSPSIG00000006864	TRNAU1AP	88	76.250	ENSOCUG00000006834	-	94	75.000	Oryctolagus_cuniculus
ENSPSIG00000006864	TRNAU1AP	98	58.672	ENSORLG00000010428	trnau1apa	92	57.394	Oryzias_latipes
ENSPSIG00000006864	TRNAU1AP	98	58.099	ENSORLG00020000926	trnau1ap	92	57.394	Oryzias_latipes_hni
ENSPSIG00000006864	TRNAU1AP	98	58.099	ENSORLG00015009858	trnau1ap	92	57.394	Oryzias_latipes_hsok
ENSPSIG00000006864	TRNAU1AP	98	58.596	ENSOMEG00000007873	trnau1apa	92	56.338	Oryzias_melastigma
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSOGAG00000002274	TRNAU1AP	95	94.891	Otolemur_garnettii
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSOARG00000002843	TRNAU1AP	95	94.891	Ovis_aries
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSPPAG00000033927	TRNAU1AP	95	95.255	Pan_paniscus
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSPPRG00000004416	TRNAU1AP	95	95.255	Panthera_pardus
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSPTIG00000016677	TRNAU1AP	95	95.255	Panthera_tigris_altaica
ENSPSIG00000006864	TRNAU1AP	98	78.598	ENSPTRG00000000434	-	97	77.122	Pan_troglodytes
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSPANG00000016019	TRNAU1AP	95	94.891	Papio_anubis
ENSPSIG00000006864	TRNAU1AP	95	57.721	ENSPKIG00000015511	trnau1apa	89	56.934	Paramormyrops_kingsleyae
ENSPSIG00000006864	TRNAU1AP	95	74.699	ENSPKIG00000022205	-	92	78.205	Paramormyrops_kingsleyae
ENSPSIG00000006864	TRNAU1AP	96	59.925	ENSPMGG00000023893	trnau1apa	89	59.023	Periophthalmus_magnuspinnatus
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSPEMG00000007877	Trnau1ap	95	94.891	Peromyscus_maniculatus_bairdii
ENSPSIG00000006864	TRNAU1AP	77	62.264	ENSPMAG00000005934	trnau1apa	94	60.377	Petromyzon_marinus
ENSPSIG00000006864	TRNAU1AP	59	61.446	ENSPMAG00000000592	trnau1apa	91	61.446	Petromyzon_marinus
ENSPSIG00000006864	TRNAU1AP	96	56.429	ENSPFOG00000008100	trnau1apa	90	56.679	Poecilia_formosa
ENSPSIG00000006864	TRNAU1AP	96	56.429	ENSPLAG00000010236	trnau1apa	93	56.679	Poecilia_latipinna
ENSPSIG00000006864	TRNAU1AP	96	58.175	ENSPMEG00000016387	trnau1apa	87	58.555	Poecilia_mexicana
ENSPSIG00000006864	TRNAU1AP	96	54.580	ENSPREG00000019821	trnau1apa	82	65.789	Poecilia_reticulata
ENSPSIG00000006864	TRNAU1AP	93	82.946	ENSPPYG00000001639	-	100	82.946	Pongo_abelii
ENSPSIG00000006864	TRNAU1AP	99	78.022	ENSPCOG00000023470	-	97	78.022	Propithecus_coquereli
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSPCOG00000027712	-	100	93.785	Propithecus_coquereli
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSPVAG00000017214	TRNAU1AP	95	95.255	Pteropus_vampyrus
ENSPSIG00000006864	TRNAU1AP	99	59.322	ENSPNYG00000010130	trnau1apa	94	59.322	Pundamilia_nyererei
ENSPSIG00000006864	TRNAU1AP	100	51.916	ENSPNAG00000024905	trnau1apa	92	50.709	Pygocentrus_nattereri
ENSPSIG00000006864	TRNAU1AP	94	87.597	ENSRNOG00000055344	Trnau1ap	88	87.597	Rattus_norvegicus
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSRBIG00000029083	TRNAU1AP	95	95.255	Rhinopithecus_bieti
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSRROG00000029128	TRNAU1AP	95	95.255	Rhinopithecus_roxellana
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSSBOG00000021299	TRNAU1AP	95	95.255	Saimiri_boliviensis_boliviensis
ENSPSIG00000006864	TRNAU1AP	100	91.606	ENSSHAG00000008108	TRNAU1AP	95	91.606	Sarcophilus_harrisii
ENSPSIG00000006864	TRNAU1AP	99	54.545	ENSSMAG00000020851	trnau1apa	95	55.782	Scophthalmus_maximus
ENSPSIG00000006864	TRNAU1AP	96	58.042	ENSSDUG00000011734	trnau1apa	90	57.692	Seriola_dumerili
ENSPSIG00000006864	TRNAU1AP	96	46.212	ENSSLDG00000012101	trnau1apa	88	51.894	Seriola_lalandi_dorsalis
ENSPSIG00000006864	TRNAU1AP	100	93.796	ENSSARG00000007536	TRNAU1AP	99	93.796	Sorex_araneus
ENSPSIG00000006864	TRNAU1AP	99	88.645	ENSSPUG00000010400	-	95	88.645	Sphenodon_punctatus
ENSPSIG00000006864	TRNAU1AP	64	86.364	ENSSPUG00000010415	-	100	86.364	Sphenodon_punctatus
ENSPSIG00000006864	TRNAU1AP	99	58.163	ENSSPAG00000005029	trnau1apa	94	58.163	Stegastes_partitus
ENSPSIG00000006864	TRNAU1AP	100	95.255	ENSSSCG00000030284	TRNAU1AP	100	94.350	Sus_scrofa
ENSPSIG00000006864	TRNAU1AP	100	96.350	ENSTGUG00000000735	-	99	96.350	Taeniopygia_guttata
ENSPSIG00000006864	TRNAU1AP	71	52.551	ENSTGUG00000005908	-	100	52.551	Taeniopygia_guttata
ENSPSIG00000006864	TRNAU1AP	99	57.241	ENSTRUG00000003352	trnau1apa	94	56.552	Takifugu_rubripes
ENSPSIG00000006864	TRNAU1AP	100	55.254	ENSTNIG00000006129	trnau1apa	95	55.518	Tetraodon_nigroviridis
ENSPSIG00000006864	TRNAU1AP	89	84.490	ENSTBEG00000008049	-	100	84.490	Tupaia_belangeri
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSTTRG00000001854	TRNAU1AP	95	94.891	Tursiops_truncatus
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSUAMG00000008789	TRNAU1AP	100	94.891	Ursus_americanus
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSUMAG00000011068	TRNAU1AP	100	93.785	Ursus_maritimus
ENSPSIG00000006864	TRNAU1AP	89	95.918	ENSVPAG00000006778	TRNAU1AP	84	95.918	Vicugna_pacos
ENSPSIG00000006864	TRNAU1AP	100	94.891	ENSVVUG00000012518	TRNAU1AP	89	94.891	Vulpes_vulpes
ENSPSIG00000006864	TRNAU1AP	96	55.714	ENSXMAG00000017361	trnau1apa	90	57.040	Xiphophorus_maculatus