EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000007396 (Gene tree)
Gene ID: -
Gene Symbol: RNPC3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 18601 bases
Position: chrJH207900.1:2548166-2566766
Accession: 102449515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000008054	RRM_1	PF00076.22	7.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000008096	RNPC3-201	5848	XM_006119844	ENSPSIP00000008054	328 (aa)	-	K7FJ44

Gene Model

Click here to download ENSPSIG00000007396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000007396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000007396	RNPC3	99	67.470	ENSG00000185946	RNPC3	99	62.827	Homo_sapiens
ENSPSIG00000007396	RNPC3	99	55.488	ENSAPOG00000017371	rnpc3	64	55.793	Acanthochromis_polyacanthus
ENSPSIG00000007396	RNPC3	99	67.771	ENSAMEG00000001694	RNPC3	63	69.277	Ailuropoda_melanoleuca
ENSPSIG00000007396	RNPC3	99	54.142	ENSACIG00000021043	rnpc3	67	53.550	Amphilophus_citrinellus
ENSPSIG00000007396	RNPC3	99	55.522	ENSAOCG00000014052	rnpc3	64	55.224	Amphiprion_ocellaris
ENSPSIG00000007396	RNPC3	99	55.224	ENSAPEG00000008739	rnpc3	64	54.925	Amphiprion_percula
ENSPSIG00000007396	RNPC3	99	52.663	ENSATEG00000021263	rnpc3	65	53.254	Anabas_testudineus
ENSPSIG00000007396	RNPC3	100	82.012	ENSAPLG00000015605	RNPC3	72	80.488	Anas_platyrhynchos
ENSPSIG00000007396	RNPC3	98	77.259	ENSACAG00000002029	RNPC3	63	74.924	Anolis_carolinensis
ENSPSIG00000007396	RNPC3	99	66.867	ENSANAG00000019950	RNPC3	63	68.373	Aotus_nancymaae
ENSPSIG00000007396	RNPC3	99	55.046	ENSACLG00000014702	rnpc3	64	53.823	Astatotilapia_calliptera
ENSPSIG00000007396	RNPC3	99	52.252	ENSAMXG00000033372	rnpc3	64	53.354	Astyanax_mexicanus
ENSPSIG00000007396	RNPC3	99	67.470	ENSBTAG00000019091	RNPC3	63	68.675	Bos_taurus
ENSPSIG00000007396	RNPC3	99	65.361	ENSCJAG00000035686	RNPC3	62	64.759	Callithrix_jacchus
ENSPSIG00000007396	RNPC3	99	66.867	ENSCAFG00000019972	RNPC3	63	68.373	Canis_familiaris
ENSPSIG00000007396	RNPC3	99	67.169	ENSCAFG00020011300	RNPC3	63	68.675	Canis_lupus_dingo
ENSPSIG00000007396	RNPC3	99	67.470	ENSCHIG00000020361	RNPC3	64	68.675	Capra_hircus
ENSPSIG00000007396	RNPC3	99	65.861	ENSTSYG00000030256	RNPC3	63	67.069	Carlito_syrichta
ENSPSIG00000007396	RNPC3	97	60.372	ENSCAPG00000013600	RNPC3	70	59.236	Cavia_aperea
ENSPSIG00000007396	RNPC3	99	69.277	ENSCPOG00000031638	RNPC3	63	69.578	Cavia_porcellus
ENSPSIG00000007396	RNPC3	99	66.867	ENSCCAG00000024301	RNPC3	63	68.373	Cebus_capucinus
ENSPSIG00000007396	RNPC3	99	57.798	ENSCATG00000035930	-	67	57.798	Cercocebus_atys
ENSPSIG00000007396	RNPC3	99	67.372	ENSCATG00000002086	RNPC3	63	69.184	Cercocebus_atys
ENSPSIG00000007396	RNPC3	99	66.867	ENSCLAG00000005169	RNPC3	63	67.470	Chinchilla_lanigera
ENSPSIG00000007396	RNPC3	99	67.372	ENSCSAG00000001519	RNPC3	63	69.184	Chlorocebus_sabaeus
ENSPSIG00000007396	RNPC3	100	93.293	ENSCPBG00000028311	RNPC3	63	93.293	Chrysemys_picta_bellii
ENSPSIG00000007396	RNPC3	97	33.125	ENSCSAVG00000002800	-	61	34.688	Ciona_savignyi
ENSPSIG00000007396	RNPC3	99	67.069	ENSCANG00000031444	RNPC3	63	68.882	Colobus_angolensis_palliatus
ENSPSIG00000007396	RNPC3	99	67.069	ENSCGRG00001019276	Rnpc3	63	68.278	Cricetulus_griseus_chok1gshd
ENSPSIG00000007396	RNPC3	99	67.069	ENSCGRG00000000053	Rnpc3	72	68.278	Cricetulus_griseus_crigri
ENSPSIG00000007396	RNPC3	99	56.231	ENSCSEG00000013475	rnpc3	64	56.231	Cynoglossus_semilaevis
ENSPSIG00000007396	RNPC3	99	52.507	ENSCVAG00000002645	rnpc3	65	52.212	Cyprinodon_variegatus
ENSPSIG00000007396	RNPC3	99	54.762	ENSDARG00000011247	rnpc3	85	66.875	Danio_rerio
ENSPSIG00000007396	RNPC3	99	67.771	ENSDNOG00000044555	-	63	68.976	Dasypus_novemcinctus
ENSPSIG00000007396	RNPC3	99	68.072	ENSDNOG00000047498	-	63	69.277	Dasypus_novemcinctus
ENSPSIG00000007396	RNPC3	100	67.372	ENSDORG00000027343	Rnpc3	63	68.882	Dipodomys_ordii
ENSPSIG00000007396	RNPC3	100	48.246	ENSEBUG00000002068	rnpc3	65	47.093	Eptatretus_burgeri
ENSPSIG00000007396	RNPC3	99	67.879	ENSEASG00005015957	RNPC3	63	69.394	Equus_asinus_asinus
ENSPSIG00000007396	RNPC3	99	67.879	ENSECAG00000021148	RNPC3	63	69.394	Equus_caballus
ENSPSIG00000007396	RNPC3	99	50.862	ENSELUG00000002264	rnpc3	65	50.862	Esox_lucius
ENSPSIG00000007396	RNPC3	99	68.072	ENSFCAG00000024312	RNPC3	63	69.578	Felis_catus
ENSPSIG00000007396	RNPC3	100	81.402	ENSFALG00000002580	RNPC3	100	78.774	Ficedula_albicollis
ENSPSIG00000007396	RNPC3	99	68.373	ENSFDAG00000019948	RNPC3	63	69.880	Fukomys_damarensis
ENSPSIG00000007396	RNPC3	99	48.930	ENSFHEG00000020647	rnpc3	63	48.624	Fundulus_heteroclitus
ENSPSIG00000007396	RNPC3	99	50.152	ENSGMOG00000019213	rnpc3	63	50.152	Gadus_morhua
ENSPSIG00000007396	RNPC3	100	82.622	ENSGALG00000005162	RNPC3	59	81.098	Gallus_gallus
ENSPSIG00000007396	RNPC3	99	54.627	ENSGAFG00000017236	rnpc3	65	53.134	Gambusia_affinis
ENSPSIG00000007396	RNPC3	99	52.711	ENSGACG00000002048	rnpc3	65	51.765	Gasterosteus_aculeatus
ENSPSIG00000007396	RNPC3	100	94.207	ENSGAGG00000008438	RNPC3	63	94.207	Gopherus_agassizii
ENSPSIG00000007396	RNPC3	99	57.798	ENSGGOG00000026201	-	65	59.327	Gorilla_gorilla
ENSPSIG00000007396	RNPC3	99	50.915	ENSHBUG00000015966	rnpc3	65	51.829	Haplochromis_burtoni
ENSPSIG00000007396	RNPC3	99	69.880	ENSHGLG00000001708	RNPC3	63	70.181	Heterocephalus_glaber_female
ENSPSIG00000007396	RNPC3	99	69.880	ENSHGLG00100003005	RNPC3	63	70.181	Heterocephalus_glaber_male
ENSPSIG00000007396	RNPC3	99	52.994	ENSHCOG00000017135	rnpc3	65	53.474	Hippocampus_comes
ENSPSIG00000007396	RNPC3	98	55.418	ENSIPUG00000002916	rnpc3	63	55.108	Ictalurus_punctatus
ENSPSIG00000007396	RNPC3	99	67.372	ENSSTOG00000025020	RNPC3	63	68.580	Ictidomys_tridecemlineatus
ENSPSIG00000007396	RNPC3	99	67.470	ENSJJAG00000010203	Rnpc3	64	68.976	Jaculus_jaculus
ENSPSIG00000007396	RNPC3	99	53.049	ENSKMAG00000017358	rnpc3	64	53.049	Kryptolebias_marmoratus
ENSPSIG00000007396	RNPC3	99	55.556	ENSLBEG00000024901	rnpc3	63	54.655	Labrus_bergylta
ENSPSIG00000007396	RNPC3	100	65.957	ENSLACG00000005720	RNPC3	59	65.653	Latimeria_chalumnae
ENSPSIG00000007396	RNPC3	99	59.760	ENSLOCG00000007986	rnpc3	64	58.859	Lepisosteus_oculatus
ENSPSIG00000007396	RNPC3	99	66.767	ENSLAFG00000032342	RNPC3	63	68.278	Loxodonta_africana
ENSPSIG00000007396	RNPC3	99	67.674	ENSMFAG00000002004	RNPC3	63	69.486	Macaca_fascicularis
ENSPSIG00000007396	RNPC3	99	57.492	ENSMFAG00000002917	-	69	56.881	Macaca_fascicularis
ENSPSIG00000007396	RNPC3	99	67.372	ENSMMUG00000018039	RNPC3	63	69.184	Macaca_mulatta
ENSPSIG00000007396	RNPC3	99	61.631	ENSMNEG00000033950	RNPC3	61	63.444	Macaca_nemestrina
ENSPSIG00000007396	RNPC3	99	53.614	ENSMNEG00000029209	-	69	55.723	Macaca_nemestrina
ENSPSIG00000007396	RNPC3	99	57.187	ENSMLEG00000034644	-	66	58.788	Mandrillus_leucophaeus
ENSPSIG00000007396	RNPC3	99	67.372	ENSMLEG00000033628	RNPC3	63	69.184	Mandrillus_leucophaeus
ENSPSIG00000007396	RNPC3	99	50.298	ENSMAMG00000007496	rnpc3	65	46.839	Mastacembelus_armatus
ENSPSIG00000007396	RNPC3	99	53.079	ENSMZEG00005020233	rnpc3	65	51.906	Maylandia_zebra
ENSPSIG00000007396	RNPC3	100	81.437	ENSMGAG00000006381	RNPC3	73	79.940	Meleagris_gallopavo
ENSPSIG00000007396	RNPC3	99	67.674	ENSMAUG00000001358	Rnpc3	63	68.882	Mesocricetus_auratus
ENSPSIG00000007396	RNPC3	100	66.967	ENSMICG00000029591	RNPC3	63	68.468	Microcebus_murinus
ENSPSIG00000007396	RNPC3	99	68.882	ENSMOCG00000013423	Rnpc3	63	68.882	Microtus_ochrogaster
ENSPSIG00000007396	RNPC3	99	50.000	ENSMMOG00000005309	rnpc3	64	50.610	Mola_mola
ENSPSIG00000007396	RNPC3	100	74.390	ENSMODG00000002946	RNPC3	63	74.390	Monodelphis_domestica
ENSPSIG00000007396	RNPC3	99	50.000	ENSMALG00000015471	rnpc3	65	49.408	Monopterus_albus
ENSPSIG00000007396	RNPC3	99	66.364	MGP_CAROLIEiJ_G0025555	Rnpc3	64	67.879	Mus_caroli
ENSPSIG00000007396	RNPC3	99	66.970	ENSMUSG00000027981	Rnpc3	70	68.485	Mus_musculus
ENSPSIG00000007396	RNPC3	99	66.269	MGP_PahariEiJ_G0027001	Rnpc3	64	68.182	Mus_pahari
ENSPSIG00000007396	RNPC3	99	67.879	MGP_SPRETEiJ_G0026505	Rnpc3	64	67.879	Mus_spretus
ENSPSIG00000007396	RNPC3	99	67.470	ENSMPUG00000007349	RNPC3	63	68.976	Mustela_putorius_furo
ENSPSIG00000007396	RNPC3	99	67.771	ENSMLUG00000028743	RNPC3	63	68.373	Myotis_lucifugus
ENSPSIG00000007396	RNPC3	99	68.882	ENSNGAG00000010939	Rnpc3	63	70.997	Nannospalax_galili
ENSPSIG00000007396	RNPC3	99	54.740	ENSNBRG00000012196	rnpc3	62	53.517	Neolamprologus_brichardi
ENSPSIG00000007396	RNPC3	99	67.470	ENSNLEG00000012013	RNPC3	63	69.277	Nomascus_leucogenys
ENSPSIG00000007396	RNPC3	99	69.880	ENSODEG00000007612	RNPC3	63	69.277	Octodon_degus
ENSPSIG00000007396	RNPC3	99	55.927	ENSONIG00000004770	rnpc3	67	56.535	Oreochromis_niloticus
ENSPSIG00000007396	RNPC3	100	74.699	ENSOANG00000008220	RNPC3	70	74.398	Ornithorhynchus_anatinus
ENSPSIG00000007396	RNPC3	99	69.184	ENSOCUG00000004016	RNPC3	63	69.486	Oryctolagus_cuniculus
ENSPSIG00000007396	RNPC3	99	55.215	ENSORLG00000005694	rnpc3	64	54.601	Oryzias_latipes
ENSPSIG00000007396	RNPC3	99	55.521	ENSORLG00020005513	rnpc3	68	54.908	Oryzias_latipes_hni
ENSPSIG00000007396	RNPC3	99	55.215	ENSORLG00015002179	rnpc3	64	54.601	Oryzias_latipes_hsok
ENSPSIG00000007396	RNPC3	99	55.215	ENSOMEG00000017737	rnpc3	64	55.215	Oryzias_melastigma
ENSPSIG00000007396	RNPC3	99	67.976	ENSOGAG00000026182	RNPC3	63	70.091	Otolemur_garnettii
ENSPSIG00000007396	RNPC3	99	67.470	ENSOARG00000018719	RNPC3	63	68.675	Ovis_aries
ENSPSIG00000007396	RNPC3	99	58.716	ENSPPAG00000030278	-	65	59.939	Pan_paniscus
ENSPSIG00000007396	RNPC3	99	67.470	ENSPPAG00000037459	RNPC3	63	69.277	Pan_paniscus
ENSPSIG00000007396	RNPC3	99	68.373	ENSPPRG00000020246	RNPC3	63	69.880	Panthera_pardus
ENSPSIG00000007396	RNPC3	99	68.373	ENSPTIG00000009887	RNPC3	64	69.880	Panthera_tigris_altaica
ENSPSIG00000007396	RNPC3	99	67.169	ENSPTRG00000033902	RNPC3	63	68.976	Pan_troglodytes
ENSPSIG00000007396	RNPC3	99	58.410	ENSPTRG00000044227	-	67	59.633	Pan_troglodytes
ENSPSIG00000007396	RNPC3	99	58.410	ENSPANG00000029957	-	66	56.575	Papio_anubis
ENSPSIG00000007396	RNPC3	99	67.372	ENSPANG00000012137	RNPC3	63	69.184	Papio_anubis
ENSPSIG00000007396	RNPC3	99	54.438	ENSPKIG00000008828	rnpc3	65	52.663	Paramormyrops_kingsleyae
ENSPSIG00000007396	RNPC3	100	47.917	ENSPMGG00000011742	rnpc3	65	48.810	Periophthalmus_magnuspinnatus
ENSPSIG00000007396	RNPC3	99	67.169	ENSPEMG00000020112	Rnpc3	72	69.277	Peromyscus_maniculatus_bairdii
ENSPSIG00000007396	RNPC3	99	45.245	ENSPMAG00000003778	rnpc3	65	46.686	Petromyzon_marinus
ENSPSIG00000007396	RNPC3	100	71.037	ENSPCIG00000004415	-	63	73.171	Phascolarctos_cinereus
ENSPSIG00000007396	RNPC3	99	52.853	ENSPFOG00000009895	rnpc3	65	52.553	Poecilia_formosa
ENSPSIG00000007396	RNPC3	99	52.853	ENSPLAG00000012023	rnpc3	65	52.853	Poecilia_latipinna
ENSPSIG00000007396	RNPC3	99	52.853	ENSPMEG00000003663	rnpc3	65	52.553	Poecilia_mexicana
ENSPSIG00000007396	RNPC3	99	51.622	ENSPREG00000010206	rnpc3	65	52.252	Poecilia_reticulata
ENSPSIG00000007396	RNPC3	75	60.800	ENSPPYG00000001102	RNPC3	56	63.200	Pongo_abelii
ENSPSIG00000007396	RNPC3	99	54.740	ENSPNYG00000020603	rnpc3	64	53.517	Pundamilia_nyererei
ENSPSIG00000007396	RNPC3	99	53.049	ENSPNAG00000000524	rnpc3	58	53.659	Pygocentrus_nattereri
ENSPSIG00000007396	RNPC3	99	67.372	ENSRNOG00000017310	Rnpc3	63	67.674	Rattus_norvegicus
ENSPSIG00000007396	RNPC3	99	60.121	ENSRBIG00000043897	RNPC3	62	61.631	Rhinopithecus_bieti
ENSPSIG00000007396	RNPC3	99	67.372	ENSRROG00000032334	RNPC3	63	69.184	Rhinopithecus_roxellana
ENSPSIG00000007396	RNPC3	99	67.470	ENSSBOG00000024473	RNPC3	63	68.976	Saimiri_boliviensis_boliviensis
ENSPSIG00000007396	RNPC3	100	70.270	ENSSHAG00000011859	RNPC3	63	72.673	Sarcophilus_harrisii
ENSPSIG00000007396	RNPC3	99	57.669	ENSSFOG00015013055	rnpc3	65	57.055	Scleropages_formosus
ENSPSIG00000007396	RNPC3	99	50.882	ENSSMAG00000020346	rnpc3	65	50.588	Scophthalmus_maximus
ENSPSIG00000007396	RNPC3	99	54.734	ENSSDUG00000006600	rnpc3	65	53.550	Seriola_dumerili
ENSPSIG00000007396	RNPC3	99	54.142	ENSSLDG00000007979	rnpc3	65	53.846	Seriola_lalandi_dorsalis
ENSPSIG00000007396	RNPC3	97	82.445	ENSSPUG00000008539	-	61	81.191	Sphenodon_punctatus
ENSPSIG00000007396	RNPC3	99	72.783	ENSSPUG00000003872	-	59	72.477	Sphenodon_punctatus
ENSPSIG00000007396	RNPC3	99	53.823	ENSSPAG00000005633	rnpc3	64	51.190	Stegastes_partitus
ENSPSIG00000007396	RNPC3	99	66.265	ENSSSCG00000037254	RNPC3	63	68.675	Sus_scrofa
ENSPSIG00000007396	RNPC3	100	79.878	ENSTGUG00000004795	-	72	79.268	Taeniopygia_guttata
ENSPSIG00000007396	RNPC3	63	77.725	ENSTGUG00000016137	-	100	77.251	Taeniopygia_guttata
ENSPSIG00000007396	RNPC3	50	62.195	ENSTRUG00000001130	-	95	62.195	Takifugu_rubripes
ENSPSIG00000007396	RNPC3	99	54.242	ENSTNIG00000018963	rnpc3	64	54.242	Tetraodon_nigroviridis
ENSPSIG00000007396	RNPC3	99	68.373	ENSUMAG00000007775	RNPC3	64	69.880	Ursus_maritimus
ENSPSIG00000007396	RNPC3	99	67.169	ENSVVUG00000000331	RNPC3	63	68.675	Vulpes_vulpes
ENSPSIG00000007396	RNPC3	84	51.736	ENSXETG00000025027	rnpc3	52	53.846	Xenopus_tropicalis
ENSPSIG00000007396	RNPC3	99	54.128	ENSXCOG00000005013	rnpc3	63	52.905	Xiphophorus_couchianus
ENSPSIG00000007396	RNPC3	99	54.627	ENSXMAG00000006495	rnpc3	65	53.134	Xiphophorus_maculatus