EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000007717 (Gene tree)
Gene ID: 102444483
Gene Symbol: PRPF6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 49646 bases
Position: chrJH211378.1:1813088-1862733
Accession: 102444483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000008681	PRP1_N	PF06424.12	4.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000008727	PRPF6-201	5394	XM_006132474	ENSPSIP00000008681	882 (aa)	XP_006132536	K7FKX1

Gene Model

Click here to download ENSPSIG00000007717's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000007717's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000007717	PRPF6	100	97.279	ENSG00000101161	PRPF6	94	97.279	Homo_sapiens
ENSPSIG00000007717	PRPF6	100	92.517	ENSAPOG00000010395	prpf6	90	92.971	Acanthochromis_polyacanthus
ENSPSIG00000007717	PRPF6	100	98.299	ENSAMEG00000001916	PRPF6	93	98.299	Ailuropoda_melanoleuca
ENSPSIG00000007717	PRPF6	98	93.072	ENSACIG00000019862	prpf6	88	93.072	Amphilophus_citrinellus
ENSPSIG00000007717	PRPF6	100	92.630	ENSAOCG00000012988	prpf6	90	93.084	Amphiprion_ocellaris
ENSPSIG00000007717	PRPF6	100	85.714	ENSAPEG00000008301	prpf6	93	86.054	Amphiprion_percula
ENSPSIG00000007717	PRPF6	98	92.725	ENSATEG00000005581	prpf6	88	92.725	Anabas_testudineus
ENSPSIG00000007717	PRPF6	100	98.753	ENSACAG00000006464	PRPF6	89	98.753	Anolis_carolinensis
ENSPSIG00000007717	PRPF6	100	97.392	ENSANAG00000012661	PRPF6	94	97.392	Aotus_nancymaae
ENSPSIG00000007717	PRPF6	100	92.290	ENSACLG00000025875	prpf6	90	92.744	Astatotilapia_calliptera
ENSPSIG00000007717	PRPF6	100	92.744	ENSAMXG00000001929	prpf6	90	93.197	Astyanax_mexicanus
ENSPSIG00000007717	PRPF6	100	97.959	ENSBTAG00000011656	PRPF6	94	97.959	Bos_taurus
ENSPSIG00000007717	PRPF6	100	97.392	ENSCJAG00000010616	PRPF6	94	97.392	Callithrix_jacchus
ENSPSIG00000007717	PRPF6	100	98.186	ENSCAFG00000013165	PRPF6	94	98.186	Canis_familiaris
ENSPSIG00000007717	PRPF6	100	98.186	ENSCAFG00020002050	PRPF6	94	98.186	Canis_lupus_dingo
ENSPSIG00000007717	PRPF6	100	97.959	ENSCHIG00000018187	PRPF6	94	97.959	Capra_hircus
ENSPSIG00000007717	PRPF6	100	98.073	ENSTSYG00000007814	PRPF6	94	98.073	Carlito_syrichta
ENSPSIG00000007717	PRPF6	100	97.166	ENSCAPG00000015077	PRPF6	96	97.166	Cavia_aperea
ENSPSIG00000007717	PRPF6	100	98.526	ENSCPOG00000007518	PRPF6	94	98.526	Cavia_porcellus
ENSPSIG00000007717	PRPF6	100	93.764	ENSCCAG00000024564	PRPF6	94	93.764	Cebus_capucinus
ENSPSIG00000007717	PRPF6	100	97.392	ENSCATG00000037473	PRPF6	92	99.646	Cercocebus_atys
ENSPSIG00000007717	PRPF6	100	94.444	ENSCLAG00000003854	PRPF6	94	94.444	Chinchilla_lanigera
ENSPSIG00000007717	PRPF6	100	91.779	ENSCSAG00000016742	PRPF6	94	91.779	Chlorocebus_sabaeus
ENSPSIG00000007717	PRPF6	90	81.138	ENSCHOG00000003315	-	100	81.138	Choloepus_hoffmanni
ENSPSIG00000007717	PRPF6	100	99.773	ENSCPBG00000013964	PRPF6	90	99.773	Chrysemys_picta_bellii
ENSPSIG00000007717	PRPF6	100	73.341	ENSCING00000008817	-	91	73.968	Ciona_intestinalis
ENSPSIG00000007717	PRPF6	100	97.166	ENSCANG00000038230	PRPF6	94	97.166	Colobus_angolensis_palliatus
ENSPSIG00000007717	PRPF6	100	98.299	ENSCGRG00001022666	Prpf6	94	98.299	Cricetulus_griseus_chok1gshd
ENSPSIG00000007717	PRPF6	100	86.848	ENSCSEG00000018561	prpf6	94	87.302	Cynoglossus_semilaevis
ENSPSIG00000007717	PRPF6	100	92.404	ENSCVAG00000010550	prpf6	90	92.857	Cyprinodon_variegatus
ENSPSIG00000007717	PRPF6	98	93.418	ENSDARG00000091367	prpf6	91	93.418	Danio_rerio
ENSPSIG00000007717	PRPF6	100	97.506	ENSDNOG00000040544	PRPF6	94	97.506	Dasypus_novemcinctus
ENSPSIG00000007717	PRPF6	97	97.780	ENSDORG00000005406	Prpf6	100	97.780	Dipodomys_ordii
ENSPSIG00000007717	PRPF6	98	73.171	FBgn0036828	CG6841	91	72.738	Drosophila_melanogaster
ENSPSIG00000007717	PRPF6	84	100.000	ENSETEG00000004447	PRPF6	78	100.000	Echinops_telfairi
ENSPSIG00000007717	PRPF6	100	87.006	ENSEBUG00000008835	prpf6	94	87.006	Eptatretus_burgeri
ENSPSIG00000007717	PRPF6	100	97.959	ENSEASG00005023115	PRPF6	94	97.959	Equus_asinus_asinus
ENSPSIG00000007717	PRPF6	100	93.424	ENSECAG00000013983	PRPF6	93	93.424	Equus_caballus
ENSPSIG00000007717	PRPF6	93	94.688	ENSEEUG00000000180	PRPF6	78	94.688	Erinaceus_europaeus
ENSPSIG00000007717	PRPF6	100	91.497	ENSELUG00000001945	prpf6	87	91.497	Esox_lucius
ENSPSIG00000007717	PRPF6	100	98.299	ENSFCAG00000001183	PRPF6	94	98.299	Felis_catus
ENSPSIG00000007717	PRPF6	99	92.378	ENSFALG00000006046	-	91	92.378	Ficedula_albicollis
ENSPSIG00000007717	PRPF6	100	98.866	ENSFALG00000010326	-	91	98.866	Ficedula_albicollis
ENSPSIG00000007717	PRPF6	100	98.526	ENSFDAG00000006451	PRPF6	100	98.526	Fukomys_damarensis
ENSPSIG00000007717	PRPF6	100	93.311	ENSFHEG00000000560	prpf6	90	93.311	Fundulus_heteroclitus
ENSPSIG00000007717	PRPF6	100	88.952	ENSGMOG00000015622	prpf6	91	89.437	Gadus_morhua
ENSPSIG00000007717	PRPF6	100	98.526	ENSGALG00000006001	PRPF6	94	98.526	Gallus_gallus
ENSPSIG00000007717	PRPF6	100	87.642	ENSGAFG00000021109	prpf6	90	88.095	Gambusia_affinis
ENSPSIG00000007717	PRPF6	100	91.156	ENSGACG00000002576	prpf6	93	91.156	Gasterosteus_aculeatus
ENSPSIG00000007717	PRPF6	100	99.660	ENSGAGG00000008653	PRPF6	90	99.660	Gopherus_agassizii
ENSPSIG00000007717	PRPF6	100	97.279	ENSGGOG00000016876	PRPF6	96	99.646	Gorilla_gorilla
ENSPSIG00000007717	PRPF6	100	92.290	ENSHBUG00000004496	prpf6	90	92.744	Haplochromis_burtoni
ENSPSIG00000007717	PRPF6	100	98.413	ENSHGLG00000009222	PRPF6	94	98.413	Heterocephalus_glaber_female
ENSPSIG00000007717	PRPF6	100	98.413	ENSHGLG00100016600	PRPF6	96	98.413	Heterocephalus_glaber_male
ENSPSIG00000007717	PRPF6	100	91.270	ENSHCOG00000011513	prpf6	90	91.723	Hippocampus_comes
ENSPSIG00000007717	PRPF6	98	93.764	ENSIPUG00000004912	prpf6	89	93.764	Ictalurus_punctatus
ENSPSIG00000007717	PRPF6	100	95.470	ENSSTOG00000002922	PRPF6	94	95.470	Ictidomys_tridecemlineatus
ENSPSIG00000007717	PRPF6	100	98.526	ENSJJAG00000000836	Prpf6	94	98.526	Jaculus_jaculus
ENSPSIG00000007717	PRPF6	98	92.725	ENSKMAG00000017800	prpf6	88	92.725	Kryptolebias_marmoratus
ENSPSIG00000007717	PRPF6	100	91.723	ENSLBEG00000012582	prpf6	90	91.723	Labrus_bergylta
ENSPSIG00000007717	PRPF6	100	94.785	ENSLOCG00000004827	prpf6	89	95.238	Lepisosteus_oculatus
ENSPSIG00000007717	PRPF6	100	97.392	ENSLAFG00000005272	PRPF6	94	97.392	Loxodonta_africana
ENSPSIG00000007717	PRPF6	100	97.166	ENSMFAG00000037542	PRPF6	96	99.646	Macaca_fascicularis
ENSPSIG00000007717	PRPF6	97	99.307	ENSMMUG00000015558	PRPF6	98	99.307	Macaca_mulatta
ENSPSIG00000007717	PRPF6	100	81.808	ENSMNEG00000045555	PRPF6	93	81.808	Macaca_nemestrina
ENSPSIG00000007717	PRPF6	100	92.404	ENSMAMG00000010718	prpf6	90	92.857	Mastacembelus_armatus
ENSPSIG00000007717	PRPF6	100	91.733	ENSMZEG00005015261	-	93	92.186	Maylandia_zebra
ENSPSIG00000007717	PRPF6	100	92.177	ENSMZEG00005026539	prpf6	100	92.630	Maylandia_zebra
ENSPSIG00000007717	PRPF6	100	98.753	ENSMGAG00000006634	PRPF6	96	98.753	Meleagris_gallopavo
ENSPSIG00000007717	PRPF6	100	98.299	ENSMAUG00000013969	Prpf6	94	98.299	Mesocricetus_auratus
ENSPSIG00000007717	PRPF6	93	97.324	ENSMICG00000017793	PRPF6	99	97.324	Microcebus_murinus
ENSPSIG00000007717	PRPF6	100	98.299	ENSMOCG00000001701	Prpf6	94	98.299	Microtus_ochrogaster
ENSPSIG00000007717	PRPF6	98	92.494	ENSMMOG00000020419	prpf6	92	92.494	Mola_mola
ENSPSIG00000007717	PRPF6	99	99.202	ENSMODG00000017051	PRPF6	92	99.202	Monodelphis_domestica
ENSPSIG00000007717	PRPF6	100	92.517	ENSMALG00000000089	prpf6	95	92.517	Monopterus_albus
ENSPSIG00000007717	PRPF6	100	91.270	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSPSIG00000007717	PRPF6	100	98.299	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSPSIG00000007717	PRPF6	100	98.299	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSPSIG00000007717	PRPF6	100	98.299	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSPSIG00000007717	PRPF6	97	98.327	ENSMPUG00000008673	PRPF6	99	98.327	Mustela_putorius_furo
ENSPSIG00000007717	PRPF6	100	98.526	ENSNGAG00000003365	Prpf6	94	98.526	Nannospalax_galili
ENSPSIG00000007717	PRPF6	100	92.404	ENSNBRG00000015025	prpf6	90	92.857	Neolamprologus_brichardi
ENSPSIG00000007717	PRPF6	100	97.166	ENSNLEG00000010208	PRPF6	96	97.699	Nomascus_leucogenys
ENSPSIG00000007717	PRPF6	100	90.514	ENSMEUG00000009824	-	84	90.514	Notamacropus_eugenii
ENSPSIG00000007717	PRPF6	100	91.950	ENSODEG00000004841	PRPF6	94	91.950	Octodon_degus
ENSPSIG00000007717	PRPF6	100	92.290	ENSONIG00000017406	prpf6	90	92.744	Oreochromis_niloticus
ENSPSIG00000007717	PRPF6	100	99.546	ENSOANG00000004920	PRPF6	94	99.546	Ornithorhynchus_anatinus
ENSPSIG00000007717	PRPF6	100	97.052	ENSOCUG00000014151	PRPF6	95	97.052	Oryctolagus_cuniculus
ENSPSIG00000007717	PRPF6	100	92.177	ENSORLG00000009592	prpf6	90	92.177	Oryzias_latipes
ENSPSIG00000007717	PRPF6	100	92.290	ENSORLG00020001458	prpf6	90	92.290	Oryzias_latipes_hni
ENSPSIG00000007717	PRPF6	100	92.290	ENSORLG00015018762	prpf6	90	92.290	Oryzias_latipes_hsok
ENSPSIG00000007717	PRPF6	100	91.837	ENSOMEG00000012174	prpf6	90	92.290	Oryzias_melastigma
ENSPSIG00000007717	PRPF6	100	89.921	ENSOGAG00000007573	PRPF6	94	89.921	Otolemur_garnettii
ENSPSIG00000007717	PRPF6	100	97.959	ENSOARG00000008776	PRPF6	93	97.959	Ovis_aries
ENSPSIG00000007717	PRPF6	100	97.279	ENSPPAG00000008686	PRPF6	96	99.646	Pan_paniscus
ENSPSIG00000007717	PRPF6	100	98.186	ENSPPRG00000008497	PRPF6	94	98.186	Panthera_pardus
ENSPSIG00000007717	PRPF6	100	98.186	ENSPTIG00000011184	PRPF6	94	98.186	Panthera_tigris_altaica
ENSPSIG00000007717	PRPF6	100	97.279	ENSPTRG00000013765	PRPF6	96	99.646	Pan_troglodytes
ENSPSIG00000007717	PRPF6	100	97.166	ENSPANG00000024135	PRPF6	94	97.166	Papio_anubis
ENSPSIG00000007717	PRPF6	100	93.991	ENSPKIG00000005627	prpf6	92	94.444	Paramormyrops_kingsleyae
ENSPSIG00000007717	PRPF6	98	90.427	ENSPMGG00000008925	prpf6	89	90.196	Periophthalmus_magnuspinnatus
ENSPSIG00000007717	PRPF6	100	98.186	ENSPEMG00000016036	Prpf6	94	98.186	Peromyscus_maniculatus_bairdii
ENSPSIG00000007717	PRPF6	100	87.896	ENSPMAG00000006144	prpf6	91	88.364	Petromyzon_marinus
ENSPSIG00000007717	PRPF6	100	99.433	ENSPCIG00000017909	PRPF6	94	99.433	Phascolarctos_cinereus
ENSPSIG00000007717	PRPF6	100	92.744	ENSPFOG00000006431	prpf6	90	93.197	Poecilia_formosa
ENSPSIG00000007717	PRPF6	100	92.630	ENSPLAG00000005974	prpf6	90	93.084	Poecilia_latipinna
ENSPSIG00000007717	PRPF6	100	92.857	ENSPMEG00000009977	prpf6	90	93.311	Poecilia_mexicana
ENSPSIG00000007717	PRPF6	100	92.744	ENSPREG00000017993	prpf6	86	93.197	Poecilia_reticulata
ENSPSIG00000007717	PRPF6	100	96.712	ENSPPYG00000011256	PRPF6	94	96.712	Pongo_abelii
ENSPSIG00000007717	PRPF6	97	99.653	ENSPCAG00000006536	PRPF6	84	99.653	Procavia_capensis
ENSPSIG00000007717	PRPF6	100	97.279	ENSPCOG00000016881	PRPF6	94	97.279	Propithecus_coquereli
ENSPSIG00000007717	PRPF6	100	91.043	ENSPVAG00000014316	PRPF6	94	91.043	Pteropus_vampyrus
ENSPSIG00000007717	PRPF6	100	74.745	ENSPNYG00000001939	prpf6	78	80.721	Pundamilia_nyererei
ENSPSIG00000007717	PRPF6	98	93.880	ENSPNAG00000015606	prpf6	88	93.880	Pygocentrus_nattereri
ENSPSIG00000007717	PRPF6	100	98.186	ENSRNOG00000051498	Prpf6	94	98.186	Rattus_norvegicus
ENSPSIG00000007717	PRPF6	100	97.166	ENSRBIG00000043613	PRPF6	98	97.924	Rhinopithecus_bieti
ENSPSIG00000007717	PRPF6	97	97.924	ENSRROG00000040969	PRPF6	98	97.924	Rhinopithecus_roxellana
ENSPSIG00000007717	PRPF6	97	93.426	ENSSBOG00000020632	PRPF6	93	93.426	Saimiri_boliviensis_boliviensis
ENSPSIG00000007717	PRPF6	100	99.433	ENSSHAG00000016810	PRPF6	94	99.433	Sarcophilus_harrisii
ENSPSIG00000007717	PRPF6	100	94.331	ENSSFOG00015020859	prpf6	95	94.785	Scleropages_formosus
ENSPSIG00000007717	PRPF6	100	91.497	ENSSMAG00000008112	prpf6	90	91.497	Scophthalmus_maximus
ENSPSIG00000007717	PRPF6	100	92.290	ENSSDUG00000016142	prpf6	90	92.744	Seriola_dumerili
ENSPSIG00000007717	PRPF6	100	92.290	ENSSLDG00000025283	prpf6	90	92.744	Seriola_lalandi_dorsalis
ENSPSIG00000007717	PRPF6	100	97.506	ENSSPUG00000018260	PRPF6	100	97.506	Sphenodon_punctatus
ENSPSIG00000007717	PRPF6	100	92.290	ENSSPAG00000015850	prpf6	90	92.744	Stegastes_partitus
ENSPSIG00000007717	PRPF6	100	97.732	ENSSSCG00000029119	PRPF6	100	97.732	Sus_scrofa
ENSPSIG00000007717	PRPF6	100	98.980	ENSTGUG00000007221	PRPF6	93	98.980	Taeniopygia_guttata
ENSPSIG00000007717	PRPF6	98	92.148	ENSTRUG00000002920	prpf6	88	92.148	Takifugu_rubripes
ENSPSIG00000007717	PRPF6	98	85.304	ENSTNIG00000017873	prpf6	92	85.304	Tetraodon_nigroviridis
ENSPSIG00000007717	PRPF6	91	98.630	ENSTBEG00000005348	PRPF6	81	98.630	Tupaia_belangeri
ENSPSIG00000007717	PRPF6	100	97.506	ENSTTRG00000013068	PRPF6	94	97.506	Tursiops_truncatus
ENSPSIG00000007717	PRPF6	100	96.825	ENSUMAG00000021631	PRPF6	94	98.815	Ursus_maritimus
ENSPSIG00000007717	PRPF6	100	98.186	ENSVVUG00000014948	PRPF6	94	98.186	Vulpes_vulpes
ENSPSIG00000007717	PRPF6	100	96.259	ENSXETG00000012054	prpf6	91	96.259	Xenopus_tropicalis
ENSPSIG00000007717	PRPF6	100	92.857	ENSXCOG00000008082	prpf6	90	93.311	Xiphophorus_couchianus
ENSPSIG00000007717	PRPF6	100	92.857	ENSXMAG00000015581	prpf6	90	93.311	Xiphophorus_maculatus