EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000007850 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: -
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 82046 bases
Position: chrJH207163.1:1026526-1108571
Accession: 26729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000008651	cwf21	PF08312.12	1.3e-14	1	1
ENSPSIP00000008635	cwf21	PF08312.12	1.4e-14	1	1
ENSPSIP00000008635	SRRM_C	PF15230.6	6.1e-24	1	1
ENSPSIP00000008651	SRRM_C	PF15230.6	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000008679	SRRM3-201	2056	-	ENSPSIP00000008635	637 (aa)	-	K7FKS5
ENSPSIT00000008695	SRRM3-202	1933	-	ENSPSIP00000008651	597 (aa)	-	K7FKU1

Gene Model

Click here to download ENSPSIG00000007850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000007850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000007850	SRRM3	98	60.906	ENSACAG00000000452	SRRM3	99	62.329	Anolis_carolinensis
ENSPSIG00000007850	SRRM3	55	58.824	ENSCAFG00000013537	SRRM3	96	48.908	Canis_familiaris
ENSPSIG00000007850	SRRM3	58	51.261	ENSCPOG00000038685	SRRM3	89	47.913	Cavia_porcellus
ENSPSIG00000007850	SRRM3	50	69.027	ENSCATG00000043129	SRRM3	58	48.919	Cercocebus_atys
ENSPSIG00000007850	SRRM3	96	75.000	ENSCPBG00000027784	SRRM3	100	76.712	Chrysemys_picta_bellii
ENSPSIG00000007850	SRRM3	57	61.207	ENSCGRG00001011385	Srrm3	89	51.586	Cricetulus_griseus_chok1gshd
ENSPSIG00000007850	SRRM3	54	62.883	ENSEASG00005016840	-	85	62.883	Equus_asinus_asinus
ENSPSIG00000007850	SRRM3	60	60.109	ENSFCAG00000044112	SRRM3	89	53.535	Felis_catus
ENSPSIG00000007850	SRRM3	96	62.393	ENSFALG00000009603	SRRM3	100	62.879	Ficedula_albicollis
ENSPSIG00000007850	SRRM3	56	78.338	ENSGALG00000001932	SRRM3	75	80.119	Gallus_gallus
ENSPSIG00000007850	SRRM3	96	74.315	ENSGAGG00000021058	SRRM3	100	75.267	Gopherus_agassizii
ENSPSIG00000007850	SRRM3	53	55.312	ENSJJAG00000023441	Srrm3	97	46.387	Jaculus_jaculus
ENSPSIG00000007850	SRRM3	88	49.638	ENSLACG00000008008	SRRM3	100	50.413	Latimeria_chalumnae
ENSPSIG00000007850	SRRM3	54	58.772	ENSLOCG00000002879	SRRM3	98	55.491	Lepisosteus_oculatus
ENSPSIG00000007850	SRRM3	56	77.647	ENSMGAG00000003690	SRRM3	88	75.660	Meleagris_gallopavo
ENSPSIG00000007850	SRRM3	59	58.225	ENSMAUG00000017613	Srrm3	90	78.571	Mesocricetus_auratus
ENSPSIG00000007850	SRRM3	57	61.782	ENSMOCG00000002565	Srrm3	89	51.419	Microtus_ochrogaster
ENSPSIG00000007850	SRRM3	91	52.517	ENSMUSG00000039860	Srrm3	90	79.464	Mus_musculus
ENSPSIG00000007850	SRRM3	91	52.517	MGP_PahariEiJ_G0024425	Srrm3	90	78.571	Mus_pahari
ENSPSIG00000007850	SRRM3	91	52.517	MGP_SPRETEiJ_G0028844	Srrm3	90	79.464	Mus_spretus
ENSPSIG00000007850	SRRM3	95	44.839	ENSPKIG00000017233	SRRM3	57	51.374	Paramormyrops_kingsleyae
ENSPSIG00000007850	SRRM3	60	58.470	ENSPCOG00000028464	SRRM3	89	53.109	Propithecus_coquereli
ENSPSIG00000007850	SRRM3	55	55.685	ENSSFOG00015001696	SRRM3	79	53.602	Scleropages_formosus
ENSPSIG00000007850	SRRM3	57	40.885	ENSSLDG00000020070	SRRM3	52	44.809	Seriola_lalandi_dorsalis