EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000007854 (Gene tree)
Gene ID: 102460013
Gene Symbol: RPP40
Alias: -
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 10603 bases
Position: chrJH224661.1:5802418-5813020
Accession: 102460013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000008584	Ribonuc_P_40	PF08584.11	2.3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000008628	RPP40-201	1936	XM_006138837	ENSPSIP00000008584	222 (aa)	XP_025035141	K7FKM4

Gene Model

Click here to download ENSPSIG00000007854's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03008	Ribosome biogenesis in eukaryotes	KEGG
pss03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000007854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000007854	RPP40	100	70.270	ENSG00000124787	RPP40	73	70.270	Homo_sapiens
ENSPSIG00000007854	RPP40	99	38.356	ENSAPOG00000008660	rpp40	71	38.356	Acanthochromis_polyacanthus
ENSPSIG00000007854	RPP40	100	68.919	ENSAMEG00000012938	RPP40	61	68.919	Ailuropoda_melanoleuca
ENSPSIG00000007854	RPP40	99	34.513	ENSACIG00000003617	rpp40	58	34.513	Amphilophus_citrinellus
ENSPSIG00000007854	RPP40	99	38.914	ENSAOCG00000011846	rpp40	60	38.914	Amphiprion_ocellaris
ENSPSIG00000007854	RPP40	99	38.914	ENSAPEG00000001322	rpp40	60	38.914	Amphiprion_percula
ENSPSIG00000007854	RPP40	99	36.771	ENSATEG00000006584	rpp40	60	38.565	Anabas_testudineus
ENSPSIG00000007854	RPP40	100	78.829	ENSAPLG00000005691	RPP40	73	78.829	Anas_platyrhynchos
ENSPSIG00000007854	RPP40	99	73.303	ENSACAG00000006550	RPP40	54	73.303	Anolis_carolinensis
ENSPSIG00000007854	RPP40	100	69.369	ENSANAG00000029246	RPP40	65	69.369	Aotus_nancymaae
ENSPSIG00000007854	RPP40	97	39.070	ENSACLG00000015883	rpp40	57	39.070	Astatotilapia_calliptera
ENSPSIG00000007854	RPP40	100	46.396	ENSAMXG00000001755	rpp40	61	46.396	Astyanax_mexicanus
ENSPSIG00000007854	RPP40	100	68.468	ENSBTAG00000003332	RPP40	61	68.468	Bos_taurus
ENSPSIG00000007854	RPP40	100	70.270	ENSCJAG00000021373	RPP40	65	70.270	Callithrix_jacchus
ENSPSIG00000007854	RPP40	100	70.270	ENSCAFG00000009435	RPP40	61	70.270	Canis_familiaris
ENSPSIG00000007854	RPP40	100	70.270	ENSCAFG00020013380	RPP40	61	70.270	Canis_lupus_dingo
ENSPSIG00000007854	RPP40	100	69.369	ENSCHIG00000016849	RPP40	73	69.369	Capra_hircus
ENSPSIG00000007854	RPP40	100	69.820	ENSTSYG00000032857	RPP40	73	69.820	Carlito_syrichta
ENSPSIG00000007854	RPP40	99	71.818	ENSCAPG00000004957	RPP40	70	71.818	Cavia_aperea
ENSPSIG00000007854	RPP40	100	72.072	ENSCPOG00000005855	RPP40	65	72.072	Cavia_porcellus
ENSPSIG00000007854	RPP40	100	70.721	ENSCCAG00000019809	RPP40	65	70.721	Cebus_capucinus
ENSPSIG00000007854	RPP40	100	70.270	ENSCATG00000038787	RPP40	65	70.270	Cercocebus_atys
ENSPSIG00000007854	RPP40	100	70.721	ENSCLAG00000003235	RPP40	65	70.721	Chinchilla_lanigera
ENSPSIG00000007854	RPP40	100	70.270	ENSCSAG00000007307	RPP40	61	70.270	Chlorocebus_sabaeus
ENSPSIG00000007854	RPP40	100	54.955	ENSCHOG00000005856	-	89	54.955	Choloepus_hoffmanni
ENSPSIG00000007854	RPP40	100	92.342	ENSCPBG00000009003	RPP40	61	92.342	Chrysemys_picta_bellii
ENSPSIG00000007854	RPP40	100	70.270	ENSCANG00000033965	RPP40	65	70.270	Colobus_angolensis_palliatus
ENSPSIG00000007854	RPP40	100	69.369	ENSCGRG00001018328	Rpp40	65	69.369	Cricetulus_griseus_chok1gshd
ENSPSIG00000007854	RPP40	100	69.369	ENSCGRG00000011344	Rpp40	61	69.369	Cricetulus_griseus_crigri
ENSPSIG00000007854	RPP40	99	35.586	ENSCSEG00000015006	-	60	35.586	Cynoglossus_semilaevis
ENSPSIG00000007854	RPP40	97	36.744	ENSCVAG00000012169	rpp40	80	36.073	Cyprinodon_variegatus
ENSPSIG00000007854	RPP40	100	49.776	ENSDARG00000017605	rpp40	61	49.776	Danio_rerio
ENSPSIG00000007854	RPP40	70	64.744	ENSDNOG00000048136	RPP40	52	64.744	Dasypus_novemcinctus
ENSPSIG00000007854	RPP40	99	54.626	ENSDORG00000011196	-	71	54.626	Dipodomys_ordii
ENSPSIG00000007854	RPP40	99	67.873	ENSDORG00000029944	-	61	67.873	Dipodomys_ordii
ENSPSIG00000007854	RPP40	98	70.183	ENSETEG00000007458	RPP40	60	70.183	Echinops_telfairi
ENSPSIG00000007854	RPP40	99	40.909	ENSEBUG00000000386	rpp40	68	40.909	Eptatretus_burgeri
ENSPSIG00000007854	RPP40	70	58.974	ENSEEUG00000012087	RPP40	52	58.974	Erinaceus_europaeus
ENSPSIG00000007854	RPP40	100	49.327	ENSELUG00000017004	rpp40	61	49.327	Esox_lucius
ENSPSIG00000007854	RPP40	100	68.468	ENSFCAG00000009249	RPP40	65	68.468	Felis_catus
ENSPSIG00000007854	RPP40	100	76.271	ENSFALG00000013166	RPP40	72	76.271	Ficedula_albicollis
ENSPSIG00000007854	RPP40	100	54.054	ENSFDAG00000000265	-	79	54.338	Fukomys_damarensis
ENSPSIG00000007854	RPP40	100	71.622	ENSFDAG00000013001	-	61	71.622	Fukomys_damarensis
ENSPSIG00000007854	RPP40	99	37.104	ENSFHEG00000021429	rpp40	53	37.104	Fundulus_heteroclitus
ENSPSIG00000007854	RPP40	78	43.931	ENSGMOG00000018653	rpp40	61	43.931	Gadus_morhua
ENSPSIG00000007854	RPP40	100	79.279	ENSGALG00000036074	RPP40	65	79.279	Gallus_gallus
ENSPSIG00000007854	RPP40	88	32.653	ENSGAFG00000004189	-	65	32.653	Gambusia_affinis
ENSPSIG00000007854	RPP40	99	37.557	ENSGACG00000002472	rpp40	78	37.557	Gasterosteus_aculeatus
ENSPSIG00000007854	RPP40	100	90.991	ENSGAGG00000012918	RPP40	61	90.991	Gopherus_agassizii
ENSPSIG00000007854	RPP40	100	71.171	ENSGGOG00000013764	RPP40	65	71.171	Gorilla_gorilla
ENSPSIG00000007854	RPP40	99	37.946	ENSHBUG00000009378	rpp40	61	37.946	Haplochromis_burtoni
ENSPSIG00000007854	RPP40	100	72.523	ENSHGLG00000004871	RPP40	65	72.523	Heterocephalus_glaber_female
ENSPSIG00000007854	RPP40	100	72.523	ENSHGLG00100002080	RPP40	65	72.523	Heterocephalus_glaber_male
ENSPSIG00000007854	RPP40	100	49.099	ENSIPUG00000008951	RPP40	62	49.099	Ictalurus_punctatus
ENSPSIG00000007854	RPP40	100	68.018	ENSSTOG00000011199	RPP40	61	68.018	Ictidomys_tridecemlineatus
ENSPSIG00000007854	RPP40	100	65.766	ENSJJAG00000020629	Rpp40	65	65.766	Jaculus_jaculus
ENSPSIG00000007854	RPP40	99	37.104	ENSKMAG00000019358	rpp40	60	37.104	Kryptolebias_marmoratus
ENSPSIG00000007854	RPP40	99	40.724	ENSLBEG00000022724	rpp40	61	40.271	Labrus_bergylta
ENSPSIG00000007854	RPP40	99	64.253	ENSLACG00000014848	RPP40	61	64.253	Latimeria_chalumnae
ENSPSIG00000007854	RPP40	100	53.604	ENSLOCG00000011650	rpp40	61	53.604	Lepisosteus_oculatus
ENSPSIG00000007854	RPP40	100	70.270	ENSLAFG00000007530	RPP40	79	70.270	Loxodonta_africana
ENSPSIG00000007854	RPP40	100	69.820	ENSMFAG00000043100	RPP40	65	69.820	Macaca_fascicularis
ENSPSIG00000007854	RPP40	100	70.270	ENSMMUG00000004966	RPP40	65	70.270	Macaca_mulatta
ENSPSIG00000007854	RPP40	100	70.270	ENSMNEG00000041986	RPP40	73	70.270	Macaca_nemestrina
ENSPSIG00000007854	RPP40	100	70.270	ENSMLEG00000040851	RPP40	74	70.270	Mandrillus_leucophaeus
ENSPSIG00000007854	RPP40	99	39.367	ENSMAMG00000019551	rpp40	60	39.367	Mastacembelus_armatus
ENSPSIG00000007854	RPP40	99	39.819	ENSMZEG00005019475	rpp40	60	39.819	Maylandia_zebra
ENSPSIG00000007854	RPP40	100	81.532	ENSMGAG00000004009	RPP40	62	81.532	Meleagris_gallopavo
ENSPSIG00000007854	RPP40	100	71.171	ENSMAUG00000010268	Rpp40	65	71.171	Mesocricetus_auratus
ENSPSIG00000007854	RPP40	100	69.820	ENSMICG00000003297	RPP40	65	69.820	Microcebus_murinus
ENSPSIG00000007854	RPP40	100	70.721	ENSMOCG00000000305	Rpp40	65	70.721	Microtus_ochrogaster
ENSPSIG00000007854	RPP40	99	35.111	ENSMMOG00000020591	-	70	35.111	Mola_mola
ENSPSIG00000007854	RPP40	100	71.749	ENSMODG00000009826	RPP40	61	71.749	Monodelphis_domestica
ENSPSIG00000007854	RPP40	99	38.462	ENSMALG00000020133	rpp40	69	38.462	Monopterus_albus
ENSPSIG00000007854	RPP40	100	70.270	MGP_CAROLIEiJ_G0018429	Rpp40	77	85.938	Mus_caroli
ENSPSIG00000007854	RPP40	100	71.171	ENSMUSG00000021418	Rpp40	76	85.938	Mus_musculus
ENSPSIG00000007854	RPP40	100	72.072	MGP_PahariEiJ_G0019497	Rpp40	77	85.938	Mus_pahari
ENSPSIG00000007854	RPP40	100	71.171	MGP_SPRETEiJ_G0019309	Rpp40	77	85.938	Mus_spretus
ENSPSIG00000007854	RPP40	100	68.919	ENSMPUG00000000530	RPP40	57	68.919	Mustela_putorius_furo
ENSPSIG00000007854	RPP40	100	69.369	ENSMLUG00000000501	RPP40	61	69.369	Myotis_lucifugus
ENSPSIG00000007854	RPP40	92	69.756	ENSNGAG00000022529	-	64	69.756	Nannospalax_galili
ENSPSIG00000007854	RPP40	100	71.622	ENSNGAG00000023955	-	65	71.622	Nannospalax_galili
ENSPSIG00000007854	RPP40	100	40.090	ENSNBRG00000017465	rpp40	62	40.090	Neolamprologus_brichardi
ENSPSIG00000007854	RPP40	100	70.270	ENSNLEG00000034397	RPP40	65	70.270	Nomascus_leucogenys
ENSPSIG00000007854	RPP40	100	72.973	ENSMEUG00000005300	RPP40	61	72.973	Notamacropus_eugenii
ENSPSIG00000007854	RPP40	100	69.820	ENSODEG00000006170	-	74	69.820	Octodon_degus
ENSPSIG00000007854	RPP40	100	65.315	ENSODEG00000018153	-	60	65.315	Octodon_degus
ENSPSIG00000007854	RPP40	100	70.270	ENSODEG00000007255	-	61	70.270	Octodon_degus
ENSPSIG00000007854	RPP40	99	39.819	ENSONIG00000014016	rpp40	60	39.819	Oreochromis_niloticus
ENSPSIG00000007854	RPP40	100	74.439	ENSOANG00000001200	RPP40	73	74.439	Ornithorhynchus_anatinus
ENSPSIG00000007854	RPP40	99	59.545	ENSOCUG00000000354	RPP40	61	59.545	Oryctolagus_cuniculus
ENSPSIG00000007854	RPP40	99	40.271	ENSORLG00000008242	-	60	40.271	Oryzias_latipes
ENSPSIG00000007854	RPP40	99	40.271	ENSORLG00020013745	-	54	40.271	Oryzias_latipes_hni
ENSPSIG00000007854	RPP40	99	40.271	ENSORLG00015000887	-	60	40.271	Oryzias_latipes_hsok
ENSPSIG00000007854	RPP40	99	40.724	ENSOMEG00000002747	rpp40	60	40.724	Oryzias_melastigma
ENSPSIG00000007854	RPP40	100	71.622	ENSOGAG00000006055	RPP40	61	71.622	Otolemur_garnettii
ENSPSIG00000007854	RPP40	100	69.820	ENSOARG00000018783	RPP40	73	69.820	Ovis_aries
ENSPSIG00000007854	RPP40	100	71.171	ENSPPAG00000023703	RPP40	65	71.171	Pan_paniscus
ENSPSIG00000007854	RPP40	100	68.468	ENSPPRG00000005612	RPP40	65	68.468	Panthera_pardus
ENSPSIG00000007854	RPP40	100	59.459	ENSPTIG00000018847	RPP40	65	59.459	Panthera_tigris_altaica
ENSPSIG00000007854	RPP40	100	70.721	ENSPTRG00000017690	RPP40	65	70.721	Pan_troglodytes
ENSPSIG00000007854	RPP40	100	70.721	ENSPANG00000017865	RPP40	65	70.721	Papio_anubis
ENSPSIG00000007854	RPP40	100	50.224	ENSPKIG00000006311	rpp40	61	50.224	Paramormyrops_kingsleyae
ENSPSIG00000007854	RPP40	100	70.721	ENSPEMG00000020809	Rpp40	66	70.721	Peromyscus_maniculatus_bairdii
ENSPSIG00000007854	RPP40	99	44.144	ENSPMAG00000008412	rpp40	80	44.144	Petromyzon_marinus
ENSPSIG00000007854	RPP40	100	72.523	ENSPCIG00000010682	RPP40	72	71.622	Phascolarctos_cinereus
ENSPSIG00000007854	RPP40	99	34.389	ENSPFOG00000011460	rpp40	59	34.389	Poecilia_formosa
ENSPSIG00000007854	RPP40	99	34.389	ENSPLAG00000001334	rpp40	60	34.389	Poecilia_latipinna
ENSPSIG00000007854	RPP40	99	35.294	ENSPMEG00000007721	rpp40	60	35.294	Poecilia_mexicana
ENSPSIG00000007854	RPP40	99	34.842	ENSPREG00000009215	rpp40	60	34.842	Poecilia_reticulata
ENSPSIG00000007854	RPP40	100	70.270	ENSPPYG00000016194	RPP40	61	70.270	Pongo_abelii
ENSPSIG00000007854	RPP40	100	71.622	ENSPCOG00000003907	RPP40	65	71.622	Propithecus_coquereli
ENSPSIG00000007854	RPP40	100	70.270	ENSPVAG00000011325	RPP40	61	70.270	Pteropus_vampyrus
ENSPSIG00000007854	RPP40	99	38.565	ENSPNYG00000004432	rpp40	72	38.565	Pundamilia_nyererei
ENSPSIG00000007854	RPP40	100	47.982	ENSPNAG00000019125	rpp40	61	47.982	Pygocentrus_nattereri
ENSPSIG00000007854	RPP40	100	69.820	ENSRNOG00000016226	Rpp40	73	69.820	Rattus_norvegicus
ENSPSIG00000007854	RPP40	100	70.270	ENSRBIG00000035800	RPP40	73	70.270	Rhinopithecus_bieti
ENSPSIG00000007854	RPP40	100	70.270	ENSRROG00000039116	RPP40	65	70.270	Rhinopithecus_roxellana
ENSPSIG00000007854	RPP40	100	70.270	ENSSBOG00000020297	RPP40	65	70.270	Saimiri_boliviensis_boliviensis
ENSPSIG00000007854	RPP40	100	73.874	ENSSHAG00000002102	RPP40	80	73.874	Sarcophilus_harrisii
ENSPSIG00000007854	RPP40	100	51.570	ENSSFOG00015001142	rpp40	50	51.570	Scleropages_formosus
ENSPSIG00000007854	RPP40	99	39.367	ENSSDUG00000007202	rpp40	64	39.367	Seriola_dumerili
ENSPSIG00000007854	RPP40	99	39.819	ENSSLDG00000017563	rpp40	64	39.819	Seriola_lalandi_dorsalis
ENSPSIG00000007854	RPP40	100	82.432	ENSSPUG00000017487	-	61	82.432	Sphenodon_punctatus
ENSPSIG00000007854	RPP40	100	78.378	ENSSPUG00000018950	-	75	78.378	Sphenodon_punctatus
ENSPSIG00000007854	RPP40	99	40.724	ENSSPAG00000022716	rpp40	60	40.724	Stegastes_partitus
ENSPSIG00000007854	RPP40	100	68.468	ENSSSCG00000000998	RPP40	73	68.468	Sus_scrofa
ENSPSIG00000007854	RPP40	80	82.486	ENSTGUG00000015246	-	100	82.486	Taeniopygia_guttata
ENSPSIG00000007854	RPP40	100	81.081	ENSTGUG00000002258	-	62	81.081	Taeniopygia_guttata
ENSPSIG00000007854	RPP40	99	36.199	ENSTRUG00000003755	rpp40	61	36.199	Takifugu_rubripes
ENSPSIG00000007854	RPP40	99	35.294	ENSTNIG00000003077	rpp40	60	35.294	Tetraodon_nigroviridis
ENSPSIG00000007854	RPP40	79	60.000	ENSTBEG00000014467	-	51	60.000	Tupaia_belangeri
ENSPSIG00000007854	RPP40	100	70.721	ENSTTRG00000007319	RPP40	61	70.721	Tursiops_truncatus
ENSPSIG00000007854	RPP40	100	69.369	ENSUAMG00000002159	RPP40	73	69.369	Ursus_americanus
ENSPSIG00000007854	RPP40	100	69.369	ENSUMAG00000018639	RPP40	62	68.950	Ursus_maritimus
ENSPSIG00000007854	RPP40	70	53.846	ENSVPAG00000004652	-	54	53.846	Vicugna_pacos
ENSPSIG00000007854	RPP40	100	70.270	ENSVVUG00000005451	RPP40	61	70.270	Vulpes_vulpes
ENSPSIG00000007854	RPP40	100	59.459	ENSXETG00000017617	rpp40	62	59.459	Xenopus_tropicalis
ENSPSIG00000007854	RPP40	90	31.863	ENSXMAG00000024940	rpp40	56	31.863	Xiphophorus_maculatus