EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000008028 (Gene tree)
Gene ID: 102445537
Gene Symbol: RAB1A
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 9795 bases
Position: chrJH206254.1:2425315-2435109
Accession: 102445537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000008820	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000008866	RAB1A-201	618	XM_006139624	ENSPSIP00000008820	205 (aa)	-	K7FLB0

Gene Model

Click here to download ENSPSIG00000008028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000008028	RAB1A	87	32.065	ENSPSIG00000003221	RERG	90	32.065
ENSPSIG00000008028	RAB1A	81	50.898	ENSPSIG00000003078	RAB30	82	50.898
ENSPSIG00000008028	RAB1A	95	44.845	ENSPSIG00000007157	RAB5A	90	44.845
ENSPSIG00000008028	RAB1A	80	35.928	ENSPSIG00000009592	MRAS	80	35.928
ENSPSIG00000008028	RAB1A	95	36.041	ENSPSIG00000003388	RAB7B	96	36.041
ENSPSIG00000008028	RAB1A	88	32.778	ENSPSIG00000015579	RAB23	73	34.104
ENSPSIG00000008028	RAB1A	76	50.943	ENSPSIG00000010242	-	62	50.943
ENSPSIG00000008028	RAB1A	98	44.712	ENSPSIG00000013143	-	96	44.712
ENSPSIG00000008028	RAB1A	58	32.231	ENSPSIG00000000594	ARL4D	60	32.231
ENSPSIG00000008028	RAB1A	96	35.533	ENSPSIG00000008757	-	96	35.533
ENSPSIG00000008028	RAB1A	81	45.509	ENSPSIG00000013051	RAB25	79	45.509
ENSPSIG00000008028	RAB1A	97	38.049	ENSPSIG00000016995	RAB17	84	38.049
ENSPSIG00000008028	RAB1A	83	43.605	ENSPSIG00000006831	RAB42	77	43.605
ENSPSIG00000008028	RAB1A	80	37.805	ENSPSIG00000015077	-	86	37.805
ENSPSIG00000008028	RAB1A	96	43.204	ENSPSIG00000003919	RAB14	96	43.204
ENSPSIG00000008028	RAB1A	89	48.087	ENSPSIG00000011994	RAB2A	98	44.712
ENSPSIG00000008028	RAB1A	57	30.252	ENSPSIG00000000950	ARL14	58	30.252
ENSPSIG00000008028	RAB1A	76	38.994	ENSPSIG00000001871	RAB9B	79	38.994
ENSPSIG00000008028	RAB1A	60	34.127	ENSPSIG00000014976	-	58	34.127
ENSPSIG00000008028	RAB1A	78	39.264	ENSPSIG00000011514	RAB7A	79	39.264
ENSPSIG00000008028	RAB1A	94	36.715	ENSPSIG00000009545	RAB36	78	36.715
ENSPSIG00000008028	RAB1A	78	30.909	ENSPSIG00000009930	DNAJC27	60	30.909
ENSPSIG00000008028	RAB1A	71	30.137	ENSPSIG00000003938	ARL3	75	30.137
ENSPSIG00000008028	RAB1A	93	40.104	ENSPSIG00000006606	-	96	40.104
ENSPSIG00000008028	RAB1A	79	35.976	ENSPSIG00000012698	-	96	35.976
ENSPSIG00000008028	RAB1A	76	38.365	ENSPSIG00000000469	RAB9A	79	38.365
ENSPSIG00000008028	RAB1A	57	31.933	ENSPSIG00000000003	ARL4A	59	31.933
ENSPSIG00000008028	RAB1A	76	34.839	ENSPSIG00000002522	-	100	34.839
ENSPSIG00000008028	RAB1A	79	33.129	ENSPSIG00000010115	RHEB	88	33.129
ENSPSIG00000008028	RAB1A	99	37.745	ENSPSIG00000009912	RAB22A	100	37.745
ENSPSIG00000008028	RAB1A	88	34.409	ENSPSIG00000014041	-	80	34.409
ENSPSIG00000008028	RAB1A	80	46.667	ENSPSIG00000009419	RAB39B	77	46.667
ENSPSIG00000008028	RAB1A	84	34.463	ENSPSIG00000014690	HRAS	92	34.463
ENSPSIG00000008028	RAB1A	79	42.236	ENSPSIG00000009095	RAB31	83	42.236
ENSPSIG00000008028	RAB1A	70	31.034	ENSPSIG00000015164	RRAS2	83	31.034
ENSPSIG00000008028	RAB1A	99	44.762	ENSPSIG00000011930	RAB11A	97	44.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008028	RAB1A	99	96.552	ENSG00000138069	RAB1A	99	99.083	Homo_sapiens
ENSPSIG00000008028	RAB1A	99	93.564	ENSAPOG00000008143	-	100	93.564	Acanthochromis_polyacanthus
ENSPSIG00000008028	RAB1A	97	99.495	ENSAMEG00000001127	RAB1A	97	99.495	Ailuropoda_melanoleuca
ENSPSIG00000008028	RAB1A	99	93.564	ENSAOCG00000020606	-	99	95.939	Amphiprion_ocellaris
ENSPSIG00000008028	RAB1A	99	93.564	ENSAPEG00000022488	-	100	93.564	Amphiprion_percula
ENSPSIG00000008028	RAB1A	99	96.552	ENSANAG00000020929	RAB1A	99	96.552	Aotus_nancymaae
ENSPSIG00000008028	RAB1A	99	94.059	ENSACLG00000003326	-	100	94.059	Astatotilapia_calliptera
ENSPSIG00000008028	RAB1A	99	92.079	ENSAMXG00000034850	-	100	92.079	Astyanax_mexicanus
ENSPSIG00000008028	RAB1A	99	96.552	ENSBTAG00000016720	RAB1A	99	99.492	Bos_taurus
ENSPSIG00000008028	RAB1A	99	96.552	ENSCJAG00000046275	RAB1A	99	99.492	Callithrix_jacchus
ENSPSIG00000008028	RAB1A	99	96.552	ENSCAFG00000003187	RAB1A	99	96.552	Canis_familiaris
ENSPSIG00000008028	RAB1A	99	96.552	ENSCAFG00020026971	RAB1A	99	96.552	Canis_lupus_dingo
ENSPSIG00000008028	RAB1A	98	99.000	ENSCHIG00000014060	RAB1A	98	99.000	Capra_hircus
ENSPSIG00000008028	RAB1A	99	97.525	ENSTSYG00000005996	RAB1A	100	99.492	Carlito_syrichta
ENSPSIG00000008028	RAB1A	99	96.552	ENSCPOG00000015437	RAB1A	99	96.552	Cavia_porcellus
ENSPSIG00000008028	RAB1A	99	96.552	ENSCCAG00000021869	RAB1A	97	99.492	Cebus_capucinus
ENSPSIG00000008028	RAB1A	97	99.495	ENSCATG00000030853	RAB1A	97	99.492	Cercocebus_atys
ENSPSIG00000008028	RAB1A	99	96.552	ENSCLAG00000014766	RAB1A	99	96.552	Chinchilla_lanigera
ENSPSIG00000008028	RAB1A	99	97.044	ENSCPBG00000013243	RAB1A	99	97.044	Chrysemys_picta_bellii
ENSPSIG00000008028	RAB1A	97	96.970	ENSCANG00000035916	RAB1A	99	96.954	Colobus_angolensis_palliatus
ENSPSIG00000008028	RAB1A	99	96.569	ENSCGRG00001012691	-	100	96.569	Cricetulus_griseus_chok1gshd
ENSPSIG00000008028	RAB1A	99	96.569	ENSCGRG00000008456	-	100	96.569	Cricetulus_griseus_crigri
ENSPSIG00000008028	RAB1A	99	96.552	ENSDNOG00000018236	RAB1A	99	96.552	Dasypus_novemcinctus
ENSPSIG00000008028	RAB1A	99	96.552	ENSDORG00000028628	-	99	96.552	Dipodomys_ordii
ENSPSIG00000008028	RAB1A	99	81.863	FBgn0285937	Rab1	99	81.863	Drosophila_melanogaster
ENSPSIG00000008028	RAB1A	99	97.030	ENSETEG00000002205	RAB1A	100	97.030	Echinops_telfairi
ENSPSIG00000008028	RAB1A	99	96.552	ENSEASG00005007298	RAB1A	99	96.552	Equus_asinus_asinus
ENSPSIG00000008028	RAB1A	99	97.030	ENSECAG00000009926	RAB1A	99	96.552	Equus_caballus
ENSPSIG00000008028	RAB1A	99	97.030	ENSEEUG00000011721	RAB1A	100	97.030	Erinaceus_europaeus
ENSPSIG00000008028	RAB1A	99	93.137	ENSELUG00000012166	RAB1A	96	93.137	Esox_lucius
ENSPSIG00000008028	RAB1A	99	96.552	ENSFCAG00000002536	RAB1A	99	96.552	Felis_catus
ENSPSIG00000008028	RAB1A	100	97.561	ENSFALG00000013624	RAB1A	100	97.561	Ficedula_albicollis
ENSPSIG00000008028	RAB1A	99	96.552	ENSFDAG00000019505	-	99	96.552	Fukomys_damarensis
ENSPSIG00000008028	RAB1A	99	92.574	ENSFHEG00000014414	-	100	92.574	Fundulus_heteroclitus
ENSPSIG00000008028	RAB1A	98	99.005	ENSGALG00000031582	RAB1A	99	97.044	Gallus_gallus
ENSPSIG00000008028	RAB1A	99	92.574	ENSGAFG00000000918	-	100	92.574	Gambusia_affinis
ENSPSIG00000008028	RAB1A	99	97.044	ENSGAGG00000006802	RAB1A	99	97.044	Gopherus_agassizii
ENSPSIG00000008028	RAB1A	97	98.990	ENSGGOG00000026603	RAB1A	99	99.492	Gorilla_gorilla
ENSPSIG00000008028	RAB1A	99	96.552	ENSHGLG00000013585	RAB1A	97	99.492	Heterocephalus_glaber_female
ENSPSIG00000008028	RAB1A	96	99.492	ENSHGLG00100007994	RAB1A	97	99.492	Heterocephalus_glaber_male
ENSPSIG00000008028	RAB1A	97	98.990	ENSSTOG00000020693	-	98	98.990	Ictidomys_tridecemlineatus
ENSPSIG00000008028	RAB1A	96	99.492	ENSJJAG00000014396	Rab1a	100	99.492	Jaculus_jaculus
ENSPSIG00000008028	RAB1A	98	94.059	ENSKMAG00000014038	-	96	94.059	Kryptolebias_marmoratus
ENSPSIG00000008028	RAB1A	99	93.069	ENSLBEG00000028426	RAB1A	100	93.069	Labrus_bergylta
ENSPSIG00000008028	RAB1A	99	96.040	ENSLACG00000012869	RAB1A	99	96.040	Latimeria_chalumnae
ENSPSIG00000008028	RAB1A	99	96.552	ENSLAFG00000016666	RAB1A	99	96.552	Loxodonta_africana
ENSPSIG00000008028	RAB1A	97	99.495	ENSMFAG00000046246	RAB1A	99	96.552	Macaca_fascicularis
ENSPSIG00000008028	RAB1A	97	99.495	ENSMMUG00000021721	RAB1A	92	99.495	Macaca_mulatta
ENSPSIG00000008028	RAB1A	94	96.354	ENSMNEG00000028414	-	96	96.354	Macaca_nemestrina
ENSPSIG00000008028	RAB1A	99	97.059	ENSMLEG00000042535	RAB1A	100	97.059	Mandrillus_leucophaeus
ENSPSIG00000008028	RAB1A	99	94.059	ENSMZEG00005013959	-	100	94.059	Maylandia_zebra
ENSPSIG00000008028	RAB1A	97	100.000	ENSMGAG00000004611	RAB1A	98	100.000	Meleagris_gallopavo
ENSPSIG00000008028	RAB1A	99	96.059	ENSMAUG00000012156	Rab1a	97	98.985	Mesocricetus_auratus
ENSPSIG00000008028	RAB1A	99	96.552	ENSMICG00000012587	RAB1A	99	96.552	Microcebus_murinus
ENSPSIG00000008028	RAB1A	99	96.059	ENSMOCG00000017022	Rab1a	98	98.985	Microtus_ochrogaster
ENSPSIG00000008028	RAB1A	99	91.584	ENSMMOG00000018709	RAB1A	100	91.584	Mola_mola
ENSPSIG00000008028	RAB1A	99	97.044	ENSMODG00000003340	RAB1A	99	97.044	Monodelphis_domestica
ENSPSIG00000008028	RAB1A	99	96.552	MGP_CAROLIEiJ_G0016115	Rab1a	99	96.552	Mus_caroli
ENSPSIG00000008028	RAB1A	99	97.030	ENSMUSG00000020149	Rab1a	100	97.030	Mus_musculus
ENSPSIG00000008028	RAB1A	99	96.552	MGP_PahariEiJ_G0016776	Rab1a	99	96.552	Mus_pahari
ENSPSIG00000008028	RAB1A	99	97.030	MGP_SPRETEiJ_G0016958	Rab1a	100	97.030	Mus_spretus
ENSPSIG00000008028	RAB1A	99	96.552	ENSMPUG00000006139	RAB1A	81	96.552	Mustela_putorius_furo
ENSPSIG00000008028	RAB1A	99	96.552	ENSMLUG00000009489	RAB1A	99	96.552	Myotis_lucifugus
ENSPSIG00000008028	RAB1A	99	96.552	ENSNGAG00000005838	Rab1a	99	96.552	Nannospalax_galili
ENSPSIG00000008028	RAB1A	99	94.059	ENSNBRG00000020492	-	100	94.059	Neolamprologus_brichardi
ENSPSIG00000008028	RAB1A	96	99.492	ENSOPRG00000006595	RAB1A	100	99.492	Ochotona_princeps
ENSPSIG00000008028	RAB1A	94	99.479	ENSODEG00000011248	-	96	99.479	Octodon_degus
ENSPSIG00000008028	RAB1A	99	92.079	ENSONIG00000006819	-	99	92.079	Oreochromis_niloticus
ENSPSIG00000008028	RAB1A	99	97.044	ENSOANG00000012438	RAB1A	99	97.044	Ornithorhynchus_anatinus
ENSPSIG00000008028	RAB1A	99	96.552	ENSOCUG00000017003	RAB1A	99	96.552	Oryctolagus_cuniculus
ENSPSIG00000008028	RAB1A	99	96.552	ENSOGAG00000026181	RAB1A	99	96.552	Otolemur_garnettii
ENSPSIG00000008028	RAB1A	97	99.495	ENSOARG00000019997	RAB1A	98	99.495	Ovis_aries
ENSPSIG00000008028	RAB1A	99	97.030	ENSPPAG00000030253	RAB1A	100	97.030	Pan_paniscus
ENSPSIG00000008028	RAB1A	99	96.552	ENSPPRG00000025077	RAB1A	99	96.552	Panthera_pardus
ENSPSIG00000008028	RAB1A	97	99.495	ENSPTIG00000013471	RAB1A	97	99.495	Panthera_tigris_altaica
ENSPSIG00000008028	RAB1A	97	98.990	ENSPTRG00000011989	RAB1A	98	98.990	Pan_troglodytes
ENSPSIG00000008028	RAB1A	97	99.495	ENSPANG00000010485	RAB1A	97	99.492	Papio_anubis
ENSPSIG00000008028	RAB1A	99	94.059	ENSPMGG00000021015	-	99	94.059	Periophthalmus_magnuspinnatus
ENSPSIG00000008028	RAB1A	99	96.552	ENSPEMG00000009340	Rab1a	97	99.492	Peromyscus_maniculatus_bairdii
ENSPSIG00000008028	RAB1A	99	97.044	ENSPCIG00000023212	RAB1A	99	97.044	Phascolarctos_cinereus
ENSPSIG00000008028	RAB1A	99	92.079	ENSPFOG00000000498	-	98	92.079	Poecilia_formosa
ENSPSIG00000008028	RAB1A	99	92.079	ENSPLAG00000015592	-	100	92.079	Poecilia_latipinna
ENSPSIG00000008028	RAB1A	99	92.079	ENSPMEG00000005288	-	100	92.079	Poecilia_mexicana
ENSPSIG00000008028	RAB1A	99	97.525	ENSPPYG00000012360	RAB1A	99	97.525	Pongo_abelii
ENSPSIG00000008028	RAB1A	99	97.059	ENSPCOG00000017244	RAB1A	99	97.059	Propithecus_coquereli
ENSPSIG00000008028	RAB1A	99	94.059	ENSPNYG00000015841	-	100	94.059	Pundamilia_nyererei
ENSPSIG00000008028	RAB1A	99	96.552	ENSRNOG00000004992	Rab1a	99	96.552	Rattus_norvegicus
ENSPSIG00000008028	RAB1A	99	96.552	ENSSBOG00000023732	RAB1A	99	96.552	Saimiri_boliviensis_boliviensis
ENSPSIG00000008028	RAB1A	97	100.000	ENSSHAG00000003597	RAB1A	99	97.549	Sarcophilus_harrisii
ENSPSIG00000008028	RAB1A	99	93.564	ENSSMAG00000021049	-	100	93.564	Scophthalmus_maximus
ENSPSIG00000008028	RAB1A	99	94.059	ENSSDUG00000022535	RAB1A	100	94.059	Seriola_dumerili
ENSPSIG00000008028	RAB1A	99	97.044	ENSSPUG00000012822	RAB1A	99	97.044	Sphenodon_punctatus
ENSPSIG00000008028	RAB1A	99	93.564	ENSSPAG00000012564	-	100	93.564	Stegastes_partitus
ENSPSIG00000008028	RAB1A	99	98.039	ENSSSCG00000008359	RAB1A	100	99.492	Sus_scrofa
ENSPSIG00000008028	RAB1A	96	100.000	ENSTGUG00000002328	RAB1A	96	100.000	Taeniopygia_guttata
ENSPSIG00000008028	RAB1A	99	93.069	ENSTRUG00000024994	RAB1A	100	93.069	Takifugu_rubripes
ENSPSIG00000008028	RAB1A	97	99.495	ENSUMAG00000021038	RAB1A	99	99.495	Ursus_maritimus
ENSPSIG00000008028	RAB1A	96	99.492	ENSVPAG00000005640	RAB1A	98	99.492	Vicugna_pacos
ENSPSIG00000008028	RAB1A	99	96.552	ENSVVUG00000027588	RAB1A	99	96.552	Vulpes_vulpes
ENSPSIG00000008028	RAB1A	99	92.574	ENSXMAG00000015776	-	100	92.574	Xiphophorus_maculatus