EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000008350 (Gene tree)
Gene ID: 102456322
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 35026 bases
Position: chrJH211944.1:119897-154922
Accession: 102456322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000009159	KH_1	PF00013.29	6.1e-39	1	2
ENSPSIP00000009159	KH_1	PF00013.29	6.1e-39	2	2
ENSPSIP00000009159	KH_2	PF07650.17	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000009205	-	1931	XM_006134116	ENSPSIP00000009159	362 (aa)	XP_006134178	K7FM99

Gene Model

Click here to download ENSPSIG00000008350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000008350	-	78	54.895	ENSPSIG00000011286	PCBP4	76	54.789
ENSPSIG00000008350	-	68	72.266	ENSPSIG00000007484	PCBP2	92	67.424
ENSPSIG00000008350	-	63	42.188	ENSPSIG00000007132	NOVA1	57	42.188
ENSPSIG00000008350	-	68	66.540	ENSPSIG00000014970	-	71	67.300

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008350	-	68	82.114	ENSAPOG00000016582	-	94	77.778	Acanthochromis_polyacanthus
ENSPSIG00000008350	-	69	79.518	ENSAPOG00000020003	pcbp3	65	79.518	Acanthochromis_polyacanthus
ENSPSIG00000008350	-	68	82.031	ENSAMEG00000001697	-	92	82.031	Ailuropoda_melanoleuca
ENSPSIG00000008350	-	72	81.226	ENSACIG00000010933	pcbp3	76	81.226	Amphilophus_citrinellus
ENSPSIG00000008350	-	68	82.114	ENSACIG00000002739	-	71	82.114	Amphilophus_citrinellus
ENSPSIG00000008350	-	68	79.757	ENSAOCG00000008592	-	92	79.757	Amphiprion_ocellaris
ENSPSIG00000008350	-	69	76.806	ENSAOCG00000007806	-	82	76.806	Amphiprion_ocellaris
ENSPSIG00000008350	-	68	81.301	ENSAPEG00000005209	-	70	81.301	Amphiprion_percula
ENSPSIG00000008350	-	72	80.608	ENSAPEG00000008011	pcbp3	94	80.608	Amphiprion_percula
ENSPSIG00000008350	-	68	81.301	ENSATEG00000009833	-	71	81.301	Anabas_testudineus
ENSPSIG00000008350	-	67	85.246	ENSATEG00000015787	-	75	85.246	Anabas_testudineus
ENSPSIG00000008350	-	68	78.846	ENSAPLG00000002975	-	92	78.846	Anas_platyrhynchos
ENSPSIG00000008350	-	100	82.216	ENSAPLG00000008951	-	95	80.964	Anas_platyrhynchos
ENSPSIG00000008350	-	68	97.143	ENSACAG00000009819	-	91	97.143	Anolis_carolinensis
ENSPSIG00000008350	-	68	81.579	ENSACAG00000004607	-	93	81.579	Anolis_carolinensis
ENSPSIG00000008350	-	68	82.114	ENSANAG00000030702	-	94	82.114	Aotus_nancymaae
ENSPSIG00000008350	-	72	77.011	ENSACLG00000003801	-	91	80.488	Astatotilapia_calliptera
ENSPSIG00000008350	-	72	80.608	ENSACLG00000011835	pcbp3	94	80.608	Astatotilapia_calliptera
ENSPSIG00000008350	-	100	65.810	ENSAMXG00000001760	zgc:110045	82	64.083	Astyanax_mexicanus
ENSPSIG00000008350	-	72	82.759	ENSAMXG00000003440	pcbp3	94	82.759	Astyanax_mexicanus
ENSPSIG00000008350	-	67	79.835	ENSAMXG00000013588	-	73	79.835	Astyanax_mexicanus
ENSPSIG00000008350	-	50	91.597	ENSCAFG00020019472	-	77	79.532	Canis_lupus_dingo
ENSPSIG00000008350	-	68	82.114	ENSCSAG00000007440	-	83	82.114	Chlorocebus_sabaeus
ENSPSIG00000008350	-	100	100.000	ENSCPBG00000000733	-	95	100.000	Chrysemys_picta_bellii
ENSPSIG00000008350	-	68	83.333	ENSCPBG00000012151	-	87	83.333	Chrysemys_picta_bellii
ENSPSIG00000008350	-	68	63.636	ENSCSEG00000016984	-	90	67.925	Cynoglossus_semilaevis
ENSPSIG00000008350	-	67	80.328	ENSCSEG00000000822	pcbp3	79	84.615	Cynoglossus_semilaevis
ENSPSIG00000008350	-	72	77.778	ENSCVAG00000005262	-	96	81.301	Cyprinodon_variegatus
ENSPSIG00000008350	-	72	80.916	ENSCVAG00000014482	pcbp3	94	80.916	Cyprinodon_variegatus
ENSPSIG00000008350	-	76	80.000	ENSDARG00000054378	pcbp3	92	86.585	Danio_rerio
ENSPSIG00000008350	-	73	68.545	ENSDARG00000110961	zgc:110045	100	66.197	Danio_rerio
ENSPSIG00000008350	-	68	82.520	ENSETEG00000015988	-	70	82.520	Echinops_telfairi
ENSPSIG00000008350	-	100	62.228	ENSEBUG00000007485	-	79	61.892	Eptatretus_burgeri
ENSPSIG00000008350	-	68	70.040	ENSEBUG00000016192	pcbp3	82	70.204	Eptatretus_burgeri
ENSPSIG00000008350	-	70	63.102	ENSEBUG00000005495	pcbp3	68	63.102	Eptatretus_burgeri
ENSPSIG00000008350	-	72	81.298	ENSELUG00000003521	pcbp3	94	81.298	Esox_lucius
ENSPSIG00000008350	-	72	77.395	ENSELUG00000001560	-	85	77.395	Esox_lucius
ENSPSIG00000008350	-	100	91.753	ENSFALG00000004411	-	96	90.722	Ficedula_albicollis
ENSPSIG00000008350	-	68	83.673	ENSFALG00000003949	-	92	83.673	Ficedula_albicollis
ENSPSIG00000008350	-	71	77.519	ENSFHEG00000016615	pcbp3	74	77.519	Fundulus_heteroclitus
ENSPSIG00000008350	-	68	81.301	ENSFHEG00000006539	-	70	81.301	Fundulus_heteroclitus
ENSPSIG00000008350	-	68	64.444	ENSGMOG00000011992	pcbp3	69	64.444	Gadus_morhua
ENSPSIG00000008350	-	67	69.202	ENSGMOG00000008611	-	75	69.202	Gadus_morhua
ENSPSIG00000008350	-	68	81.887	ENSGALG00000004394	-	74	81.887	Gallus_gallus
ENSPSIG00000008350	-	69	97.992	ENSGALG00000013155	-	90	97.992	Gallus_gallus
ENSPSIG00000008350	-	72	77.395	ENSGAFG00000010274	-	94	77.395	Gambusia_affinis
ENSPSIG00000008350	-	68	84.615	ENSGAFG00000011430	pcbp3	72	84.615	Gambusia_affinis
ENSPSIG00000008350	-	67	70.722	ENSGACG00000014955	-	91	70.722	Gasterosteus_aculeatus
ENSPSIG00000008350	-	67	75.379	ENSGACG00000002266	-	91	75.379	Gasterosteus_aculeatus
ENSPSIG00000008350	-	57	79.470	ENSGAGG00000006956	-	61	79.470	Gopherus_agassizii
ENSPSIG00000008350	-	100	99.724	ENSGAGG00000000271	-	100	99.724	Gopherus_agassizii
ENSPSIG00000008350	-	72	80.916	ENSHBUG00000010697	pcbp3	94	80.916	Haplochromis_burtoni
ENSPSIG00000008350	-	72	77.011	ENSHBUG00000021782	-	91	80.488	Haplochromis_burtoni
ENSPSIG00000008350	-	68	76.735	ENSHCOG00000006067	-	88	76.735	Hippocampus_comes
ENSPSIG00000008350	-	72	81.226	ENSHCOG00000017868	pcbp3	94	81.226	Hippocampus_comes
ENSPSIG00000008350	-	78	60.476	ENSIPUG00000003914	zgc:110045	100	61.321	Ictalurus_punctatus
ENSPSIG00000008350	-	68	86.992	ENSIPUG00000006238	pcbp3	92	86.992	Ictalurus_punctatus
ENSPSIG00000008350	-	72	80.608	ENSKMAG00000003046	pcbp3	94	80.608	Kryptolebias_marmoratus
ENSPSIG00000008350	-	72	77.011	ENSKMAG00000018530	-	94	77.011	Kryptolebias_marmoratus
ENSPSIG00000008350	-	72	73.462	ENSLBEG00000006542	-	77	77.959	Labrus_bergylta
ENSPSIG00000008350	-	68	79.675	ENSLBEG00000006201	pcbp3	70	79.675	Labrus_bergylta
ENSPSIG00000008350	-	99	63.660	ENSLACG00000010386	pcbp3	76	76.632	Latimeria_chalumnae
ENSPSIG00000008350	-	100	91.948	ENSLACG00000010804	zgc:110045	96	91.948	Latimeria_chalumnae
ENSPSIG00000008350	-	100	89.091	ENSLOCG00000005058	zgc:110045	96	89.091	Lepisosteus_oculatus
ENSPSIG00000008350	-	68	87.398	ENSLOCG00000009369	pcbp3	92	87.398	Lepisosteus_oculatus
ENSPSIG00000008350	-	68	81.301	ENSMAMG00000011620	-	71	81.301	Mastacembelus_armatus
ENSPSIG00000008350	-	70	78.261	ENSMAMG00000022336	pcbp3	71	78.261	Mastacembelus_armatus
ENSPSIG00000008350	-	72	81.226	ENSMZEG00005008993	pcbp3	72	84.553	Maylandia_zebra
ENSPSIG00000008350	-	72	74.231	ENSMZEG00005014882	-	75	73.846	Maylandia_zebra
ENSPSIG00000008350	-	68	71.161	ENSMGAG00000001883	-	91	72.388	Meleagris_gallopavo
ENSPSIG00000008350	-	100	91.495	ENSMGAG00000006794	-	96	91.495	Meleagris_gallopavo
ENSPSIG00000008350	-	68	80.488	ENSMMOG00000005216	-	71	80.488	Mola_mola
ENSPSIG00000008350	-	68	80.081	ENSMMOG00000000730	pcbp3	63	80.081	Mola_mola
ENSPSIG00000008350	-	65	78.140	ENSMODG00000027884	-	94	78.140	Monodelphis_domestica
ENSPSIG00000008350	-	72	81.226	ENSMALG00000000691	pcbp3	76	81.226	Monopterus_albus
ENSPSIG00000008350	-	68	75.472	ENSMPUG00000001779	-	67	75.472	Mustela_putorius_furo
ENSPSIG00000008350	-	72	81.538	ENSNBRG00000016409	-	76	81.538	Neolamprologus_brichardi
ENSPSIG00000008350	-	72	78.195	ENSNBRG00000016714	-	77	78.195	Neolamprologus_brichardi
ENSPSIG00000008350	-	67	80.228	ENSOPRG00000003431	-	76	80.228	Ochotona_princeps
ENSPSIG00000008350	-	70	76.838	ENSONIG00000012122	-	94	76.838	Oreochromis_niloticus
ENSPSIG00000008350	-	68	80.488	ENSONIG00000004611	-	91	80.488	Oreochromis_niloticus
ENSPSIG00000008350	-	68	82.449	ENSOCUG00000002696	-	83	82.449	Oryctolagus_cuniculus
ENSPSIG00000008350	-	67	80.328	ENSORLG00000000059	pcbp3	94	80.328	Oryzias_latipes
ENSPSIG00000008350	-	72	77.863	ENSORLG00000022739	-	91	81.301	Oryzias_latipes
ENSPSIG00000008350	-	67	80.328	ENSORLG00020012671	pcbp3	91	80.328	Oryzias_latipes_hni
ENSPSIG00000008350	-	72	77.481	ENSORLG00020006124	-	91	80.894	Oryzias_latipes_hni
ENSPSIG00000008350	-	67	80.328	ENSORLG00015000429	pcbp3	91	80.328	Oryzias_latipes_hsok
ENSPSIG00000008350	-	72	77.863	ENSORLG00015008051	-	94	77.863	Oryzias_latipes_hsok
ENSPSIG00000008350	-	68	81.301	ENSOMEG00000020162	-	91	81.301	Oryzias_melastigma
ENSPSIG00000008350	-	67	80.328	ENSOMEG00000020811	pcbp3	76	80.328	Oryzias_melastigma
ENSPSIG00000008350	-	68	76.384	ENSOGAG00000008044	-	93	76.384	Otolemur_garnettii
ENSPSIG00000008350	-	52	89.231	ENSPKIG00000020913	-	58	89.231	Paramormyrops_kingsleyae
ENSPSIG00000008350	-	68	81.707	ENSPKIG00000019329	pcbp3	94	78.077	Paramormyrops_kingsleyae
ENSPSIG00000008350	-	72	81.154	ENSPMGG00000022383	pcbp3	94	81.154	Periophthalmus_magnuspinnatus
ENSPSIG00000008350	-	73	69.685	ENSPMAG00000004551	pcbp3	66	69.685	Petromyzon_marinus
ENSPSIG00000008350	-	68	87.805	ENSPCIG00000028092	-	92	87.805	Phascolarctos_cinereus
ENSPSIG00000008350	-	68	77.519	ENSPLAG00000004074	-	68	77.519	Poecilia_latipinna
ENSPSIG00000008350	-	70	78.309	ENSPLAG00000011449	pcbp3	70	78.309	Poecilia_latipinna
ENSPSIG00000008350	-	72	77.692	ENSPMEG00000006653	-	76	77.692	Poecilia_mexicana
ENSPSIG00000008350	-	72	81.226	ENSPMEG00000021239	pcbp3	74	81.226	Poecilia_mexicana
ENSPSIG00000008350	-	68	79.757	ENSPREG00000015736	pcbp3	73	79.757	Poecilia_reticulata
ENSPSIG00000008350	-	68	81.301	ENSPREG00000020585	-	83	76.712	Poecilia_reticulata
ENSPSIG00000008350	-	68	79.032	ENSPNYG00000012326	pcbp3	69	79.032	Pundamilia_nyererei
ENSPSIG00000008350	-	68	80.488	ENSPNYG00000013205	-	71	80.488	Pundamilia_nyererei
ENSPSIG00000008350	-	68	81.301	ENSPNAG00000015104	pcbp3	91	81.301	Pygocentrus_nattereri
ENSPSIG00000008350	-	77	67.136	ENSPNAG00000006838	zgc:110045	100	66.197	Pygocentrus_nattereri
ENSPSIG00000008350	-	72	80.843	ENSPNAG00000008541	-	94	80.843	Pygocentrus_nattereri
ENSPSIG00000008350	-	68	82.114	ENSRNOG00000001245	Pcbp3	92	82.114	Rattus_norvegicus
ENSPSIG00000008350	-	66	77.642	ENSRBIG00000028177	-	73	76.226	Rhinopithecus_bieti
ENSPSIG00000008350	-	68	78.810	ENSSHAG00000007890	-	92	76.981	Sarcophilus_harrisii
ENSPSIG00000008350	-	67	87.243	ENSSFOG00015010205	pcbp3	94	77.692	Scleropages_formosus
ENSPSIG00000008350	-	72	81.538	ENSSFOG00015014706	pcbp3	94	81.538	Scleropages_formosus
ENSPSIG00000008350	-	67	83.128	ENSSFOG00015007118	-	68	83.128	Scleropages_formosus
ENSPSIG00000008350	-	72	77.395	ENSSMAG00000003135	-	91	80.894	Scophthalmus_maximus
ENSPSIG00000008350	-	67	80.328	ENSSMAG00000011929	pcbp3	71	80.328	Scophthalmus_maximus
ENSPSIG00000008350	-	67	84.898	ENSSDUG00000011608	pcbp3	74	84.898	Seriola_dumerili
ENSPSIG00000008350	-	72	76.923	ENSSDUG00000008502	-	74	76.923	Seriola_dumerili
ENSPSIG00000008350	-	67	84.898	ENSSLDG00000008518	pcbp3	74	84.898	Seriola_lalandi_dorsalis
ENSPSIG00000008350	-	72	77.778	ENSSLDG00000020161	-	94	77.778	Seriola_lalandi_dorsalis
ENSPSIG00000008350	-	100	92.969	ENSSPUG00000013214	-	77	99.588	Sphenodon_punctatus
ENSPSIG00000008350	-	72	66.667	ENSSPAG00000023341	-	73	66.667	Stegastes_partitus
ENSPSIG00000008350	-	68	77.821	ENSSPAG00000004190	-	80	77.821	Stegastes_partitus
ENSPSIG00000008350	-	68	89.431	ENSTGUG00000008158	-	92	89.431	Taeniopygia_guttata
ENSPSIG00000008350	-	68	77.068	ENSTGUG00000003316	-	72	77.068	Taeniopygia_guttata
ENSPSIG00000008350	-	68	80.894	ENSTRUG00000006280	-	71	80.894	Takifugu_rubripes
ENSPSIG00000008350	-	72	79.693	ENSTRUG00000013604	pcbp3	76	92.793	Takifugu_rubripes
ENSPSIG00000008350	-	68	80.377	ENSTTRG00000015075	-	93	80.377	Tursiops_truncatus
ENSPSIG00000008350	-	68	76.316	ENSXETG00000011483	pcbp1	90	76.316	Xenopus_tropicalis
ENSPSIG00000008350	-	100	88.660	ENSXETG00000010491	pcbp2	85	88.660	Xenopus_tropicalis
ENSPSIG00000008350	-	72	81.226	ENSXCOG00000020481	pcbp3	74	81.226	Xiphophorus_couchianus
ENSPSIG00000008350	-	72	80.608	ENSXMAG00000008175	pcbp3	94	80.608	Xiphophorus_maculatus
ENSPSIG00000008350	-	72	77.778	ENSXMAG00000028711	-	94	77.778	Xiphophorus_maculatus