EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000008407 (Gene tree)
Gene ID: 102448836
Gene Symbol: SETDB1
Alias: -
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 13172 bases
Position: chrJH211329.1:452253-465424
Accession: 10761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000009218	MBD	PF01429.19	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000009264	SETDB1-201	2555	-	ENSPSIP00000009218	847 (aa)	-	K7FMF8

Gene Model

Click here to download ENSPSIG00000008407's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000008407	SETDB1	60	45.421	ENSPSIG00000002200	SETDB2	69	45.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008407	SETDB1	85	79.567	ENSG00000143379	SETDB1	63	73.723	Homo_sapiens
ENSPSIG00000008407	SETDB1	84	56.474	ENSAPOG00000016228	setdb1b	52	54.195	Acanthochromis_polyacanthus
ENSPSIG00000008407	SETDB1	85	79.432	ENSAMEG00000001160	SETDB1	56	80.108	Ailuropoda_melanoleuca
ENSPSIG00000008407	SETDB1	73	67.836	ENSACIG00000007359	setdb1b	53	67.836	Amphilophus_citrinellus
ENSPSIG00000008407	SETDB1	69	68.349	ENSAOCG00000005586	setdb1b	55	69.178	Amphiprion_ocellaris
ENSPSIG00000008407	SETDB1	69	68.119	ENSAPEG00000007774	setdb1b	54	68.493	Amphiprion_percula
ENSPSIG00000008407	SETDB1	86	84.492	ENSAPLG00000013908	SETDB1	57	84.492	Anas_platyrhynchos
ENSPSIG00000008407	SETDB1	85	80.000	ENSANAG00000001819	SETDB1	57	80.000	Aotus_nancymaae
ENSPSIG00000008407	SETDB1	84	52.000	ENSACLG00000020489	setdb1b	52	56.410	Astatotilapia_calliptera
ENSPSIG00000008407	SETDB1	76	66.667	ENSAMXG00000016168	setdb1b	50	66.667	Astyanax_mexicanus
ENSPSIG00000008407	SETDB1	85	79.459	ENSBTAG00000000098	SETDB1	57	79.459	Bos_taurus
ENSPSIG00000008407	SETDB1	85	79.432	ENSCJAG00000006972	SETDB1	56	79.432	Callithrix_jacchus
ENSPSIG00000008407	SETDB1	85	79.838	ENSCAFG00000023501	SETDB1	66	79.973	Canis_familiaris
ENSPSIG00000008407	SETDB1	85	79.838	ENSCAFG00020013596	SETDB1	59	78.890	Canis_lupus_dingo
ENSPSIG00000008407	SETDB1	85	79.595	ENSCHIG00000010698	SETDB1	58	79.111	Capra_hircus
ENSPSIG00000008407	SETDB1	85	66.576	ENSCAPG00000013619	SETDB1	68	66.984	Cavia_aperea
ENSPSIG00000008407	SETDB1	85	79.567	ENSCPOG00000001632	SETDB1	57	79.973	Cavia_porcellus
ENSPSIG00000008407	SETDB1	85	79.702	ENSCCAG00000024882	SETDB1	57	79.865	Cebus_capucinus
ENSPSIG00000008407	SETDB1	85	79.838	ENSCATG00000044888	SETDB1	58	79.838	Cercocebus_atys
ENSPSIG00000008407	SETDB1	85	79.432	ENSCLAG00000000242	SETDB1	56	79.567	Chinchilla_lanigera
ENSPSIG00000008407	SETDB1	85	79.702	ENSCSAG00000018034	SETDB1	64	79.702	Chlorocebus_sabaeus
ENSPSIG00000008407	SETDB1	85	74.321	ENSCHOG00000004013	SETDB1	57	74.321	Choloepus_hoffmanni
ENSPSIG00000008407	SETDB1	85	92.276	ENSCPBG00000008716	SETDB1	57	92.276	Chrysemys_picta_bellii
ENSPSIG00000008407	SETDB1	85	79.432	ENSCANG00000036388	SETDB1	63	79.432	Colobus_angolensis_palliatus
ENSPSIG00000008407	SETDB1	85	78.214	ENSCGRG00001010822	Setdb1	57	78.349	Cricetulus_griseus_chok1gshd
ENSPSIG00000008407	SETDB1	85	78.214	ENSCGRG00000005953	Setdb1	57	78.349	Cricetulus_griseus_crigri
ENSPSIG00000008407	SETDB1	71	66.474	ENSCSEG00000002988	setdb1b	58	56.193	Cynoglossus_semilaevis
ENSPSIG00000008407	SETDB1	69	67.045	ENSCVAG00000008877	setdb1b	53	57.902	Cyprinodon_variegatus
ENSPSIG00000008407	SETDB1	84	58.033	ENSDARG00000099021	setdb1b	53	58.921	Danio_rerio
ENSPSIG00000008407	SETDB1	85	79.650	ENSDNOG00000007754	SETDB1	57	80.000	Dasypus_novemcinctus
ENSPSIG00000008407	SETDB1	85	78.649	ENSDORG00000006830	Setdb1	57	78.649	Dipodomys_ordii
ENSPSIG00000008407	SETDB1	86	50.452	ENSEBUG00000005735	setdb1b	75	50.710	Eptatretus_burgeri
ENSPSIG00000008407	SETDB1	85	79.026	ENSEASG00005002061	SETDB1	56	79.702	Equus_asinus_asinus
ENSPSIG00000008407	SETDB1	85	79.161	ENSECAG00000023954	SETDB1	56	79.838	Equus_caballus
ENSPSIG00000008407	SETDB1	79	65.342	ENSELUG00000013948	setdb1b	56	55.158	Esox_lucius
ENSPSIG00000008407	SETDB1	85	77.267	ENSFCAG00000009655	SETDB1	57	77.943	Felis_catus
ENSPSIG00000008407	SETDB1	85	79.595	ENSFDAG00000021515	SETDB1	57	80.000	Fukomys_damarensis
ENSPSIG00000008407	SETDB1	80	63.991	ENSFHEG00000022195	setdb1b	51	57.259	Fundulus_heteroclitus
ENSPSIG00000008407	SETDB1	70	75.472	ENSGMOG00000005993	setdb1b	51	75.472	Gadus_morhua
ENSPSIG00000008407	SETDB1	85	83.037	ENSGALG00000024051	SETDB1	52	83.037	Gallus_gallus
ENSPSIG00000008407	SETDB1	76	67.191	ENSGAFG00000012805	setdb1b	55	55.292	Gambusia_affinis
ENSPSIG00000008407	SETDB1	84	52.144	ENSGACG00000011675	setdb1b	54	57.781	Gasterosteus_aculeatus
ENSPSIG00000008407	SETDB1	85	92.005	ENSGAGG00000005348	SETDB1	57	92.005	Gopherus_agassizii
ENSPSIG00000008407	SETDB1	85	79.702	ENSGGOG00000016308	SETDB1	61	75.564	Gorilla_gorilla
ENSPSIG00000008407	SETDB1	84	53.793	ENSHBUG00000004618	setdb1b	52	56.410	Haplochromis_burtoni
ENSPSIG00000008407	SETDB1	85	79.838	ENSHGLG00000011098	SETDB1	57	79.838	Heterocephalus_glaber_female
ENSPSIG00000008407	SETDB1	85	79.048	ENSHGLG00100009789	SETDB1	56	79.133	Heterocephalus_glaber_male
ENSPSIG00000008407	SETDB1	68	66.474	ENSHCOG00000014567	setdb1b	51	67.052	Hippocampus_comes
ENSPSIG00000008407	SETDB1	94	53.988	ENSIPUG00000004536	setdb1	64	53.951	Ictalurus_punctatus
ENSPSIG00000008407	SETDB1	85	79.595	ENSSTOG00000006770	SETDB1	56	79.595	Ictidomys_tridecemlineatus
ENSPSIG00000008407	SETDB1	70	66.474	ENSKMAG00000001197	setdb1b	50	67.429	Kryptolebias_marmoratus
ENSPSIG00000008407	SETDB1	77	65.318	ENSLBEG00000025862	setdb1b	55	66.474	Labrus_bergylta
ENSPSIG00000008407	SETDB1	85	72.273	ENSLACG00000011159	SETDB1	57	72.273	Latimeria_chalumnae
ENSPSIG00000008407	SETDB1	85	79.567	ENSLAFG00000004006	SETDB1	56	79.567	Loxodonta_africana
ENSPSIG00000008407	SETDB1	85	79.702	ENSMFAG00000042328	SETDB1	57	79.702	Macaca_fascicularis
ENSPSIG00000008407	SETDB1	85	79.702	ENSMMUG00000023235	SETDB1	57	79.702	Macaca_mulatta
ENSPSIG00000008407	SETDB1	85	79.702	ENSMNEG00000017223	SETDB1	57	79.702	Macaca_nemestrina
ENSPSIG00000008407	SETDB1	85	79.702	ENSMLEG00000033050	SETDB1	57	79.702	Mandrillus_leucophaeus
ENSPSIG00000008407	SETDB1	84	52.000	ENSMZEG00005016099	setdb1b	52	56.410	Maylandia_zebra
ENSPSIG00000008407	SETDB1	69	80.769	ENSMGAG00000001018	SETDB1	51	80.769	Meleagris_gallopavo
ENSPSIG00000008407	SETDB1	85	78.514	ENSMAUG00000021391	Setdb1	67	78.649	Mesocricetus_auratus
ENSPSIG00000008407	SETDB1	85	79.702	ENSMICG00000000425	SETDB1	57	79.011	Microcebus_murinus
ENSPSIG00000008407	SETDB1	85	77.476	ENSMOCG00000017407	Setdb1	56	78.290	Microtus_ochrogaster
ENSPSIG00000008407	SETDB1	76	63.975	ENSMMOG00000016162	setdb1b	54	67.052	Mola_mola
ENSPSIG00000008407	SETDB1	85	79.026	ENSMODG00000018821	SETDB1	52	79.432	Monodelphis_domestica
ENSPSIG00000008407	SETDB1	69	71.519	ENSMALG00000007801	setdb1b	53	58.449	Monopterus_albus
ENSPSIG00000008407	SETDB1	85	76.590	MGP_CAROLIEiJ_G0025342	Setdb1	56	77.432	Mus_caroli
ENSPSIG00000008407	SETDB1	85	76.486	ENSMUSG00000015697	Setdb1	56	77.162	Mus_musculus
ENSPSIG00000008407	SETDB1	85	80.108	ENSMPUG00000004298	SETDB1	56	80.108	Mustela_putorius_furo
ENSPSIG00000008407	SETDB1	85	79.946	ENSMLUG00000010486	SETDB1	56	80.244	Myotis_lucifugus
ENSPSIG00000008407	SETDB1	85	79.404	ENSNGAG00000020151	Setdb1	58	79.404	Nannospalax_galili
ENSPSIG00000008407	SETDB1	69	67.836	ENSNBRG00000003147	setdb1b	55	53.168	Neolamprologus_brichardi
ENSPSIG00000008407	SETDB1	85	76.064	ENSNLEG00000009996	SETDB1	61	72.256	Nomascus_leucogenys
ENSPSIG00000008407	SETDB1	85	78.514	ENSMEUG00000006544	-	57	79.054	Notamacropus_eugenii
ENSPSIG00000008407	SETDB1	85	74.019	ENSMEUG00000000555	-	57	74.290	Notamacropus_eugenii
ENSPSIG00000008407	SETDB1	81	77.762	ENSOPRG00000015349	SETDB1	56	77.762	Ochotona_princeps
ENSPSIG00000008407	SETDB1	85	79.026	ENSODEG00000012471	SETDB1	57	79.432	Octodon_degus
ENSPSIG00000008407	SETDB1	84	53.315	ENSONIG00000006454	setdb1b	53	58.069	Oreochromis_niloticus
ENSPSIG00000008407	SETDB1	85	79.592	ENSOCUG00000003642	SETDB1	56	79.755	Oryctolagus_cuniculus
ENSPSIG00000008407	SETDB1	71	63.499	ENSORLG00000010602	setdb1b	53	63.830	Oryzias_latipes
ENSPSIG00000008407	SETDB1	71	63.283	ENSORLG00015014543	setdb1b	53	63.425	Oryzias_latipes_hsok
ENSPSIG00000008407	SETDB1	70	66.067	ENSOMEG00000009457	setdb1b	55	65.714	Oryzias_melastigma
ENSPSIG00000008407	SETDB1	85	77.568	ENSOGAG00000010320	SETDB1	57	77.568	Otolemur_garnettii
ENSPSIG00000008407	SETDB1	85	79.432	ENSOARG00000020880	SETDB1	57	79.595	Ovis_aries
ENSPSIG00000008407	SETDB1	85	79.567	ENSPPAG00000041015	SETDB1	63	73.723	Pan_paniscus
ENSPSIG00000008407	SETDB1	85	79.296	ENSPPRG00000005462	SETDB1	57	79.973	Panthera_pardus
ENSPSIG00000008407	SETDB1	85	79.459	ENSPTIG00000014233	SETDB1	57	79.973	Panthera_tigris_altaica
ENSPSIG00000008407	SETDB1	85	79.567	ENSPTRG00000001267	SETDB1	63	73.723	Pan_troglodytes
ENSPSIG00000008407	SETDB1	85	76.543	ENSPANG00000020214	SETDB1	56	76.543	Papio_anubis
ENSPSIG00000008407	SETDB1	84	58.476	ENSPKIG00000010963	setdb1b	53	59.527	Paramormyrops_kingsleyae
ENSPSIG00000008407	SETDB1	85	77.027	ENSPEMG00000010553	Setdb1	61	78.514	Peromyscus_maniculatus_bairdii
ENSPSIG00000008407	SETDB1	84	54.558	ENSPMAG00000001573	setdb1b	57	54.558	Petromyzon_marinus
ENSPSIG00000008407	SETDB1	84	58.560	ENSPFOG00000004623	-	55	59.079	Poecilia_formosa
ENSPSIG00000008407	SETDB1	84	57.351	ENSPFOG00000004429	setdb1b	54	57.860	Poecilia_formosa
ENSPSIG00000008407	SETDB1	84	53.232	ENSPLAG00000019076	-	52	57.493	Poecilia_latipinna
ENSPSIG00000008407	SETDB1	81	51.429	ENSPLAG00000017117	setdb1b	51	55.887	Poecilia_latipinna
ENSPSIG00000008407	SETDB1	84	53.232	ENSPMEG00000006468	setdb1b	51	57.493	Poecilia_mexicana
ENSPSIG00000008407	SETDB1	84	53.232	ENSPREG00000017459	setdb1b	51	57.766	Poecilia_reticulata
ENSPSIG00000008407	SETDB1	85	79.702	ENSPPYG00000000887	SETDB1	63	73.844	Pongo_abelii
ENSPSIG00000008407	SETDB1	63	78.040	ENSPCAG00000002527	SETDB1	50	78.040	Procavia_capensis
ENSPSIG00000008407	SETDB1	85	79.702	ENSPCOG00000027869	SETDB1	57	79.702	Propithecus_coquereli
ENSPSIG00000008407	SETDB1	73	67.836	ENSPNYG00000003997	setdb1b	55	67.836	Pundamilia_nyererei
ENSPSIG00000008407	SETDB1	84	57.750	ENSPNAG00000021617	setdb1b	53	57.888	Pygocentrus_nattereri
ENSPSIG00000008407	SETDB1	85	76.590	ENSRNOG00000021143	Setdb1	56	77.267	Rattus_norvegicus
ENSPSIG00000008407	SETDB1	85	79.702	ENSRBIG00000042359	SETDB1	57	79.702	Rhinopithecus_bieti
ENSPSIG00000008407	SETDB1	85	79.702	ENSRROG00000032628	SETDB1	57	79.702	Rhinopithecus_roxellana
ENSPSIG00000008407	SETDB1	85	79.730	ENSSBOG00000028608	SETDB1	56	79.730	Saimiri_boliviensis_boliviensis
ENSPSIG00000008407	SETDB1	85	79.539	ENSSHAG00000012701	SETDB1	57	79.810	Sarcophilus_harrisii
ENSPSIG00000008407	SETDB1	60	82.175	ENSSFOG00015022183	setdb1	53	58.445	Scleropages_formosus
ENSPSIG00000008407	SETDB1	85	82.923	ENSSPUG00000002969	SETDB1	57	82.923	Sphenodon_punctatus
ENSPSIG00000008407	SETDB1	85	80.000	ENSSSCG00000006645	SETDB1	64	80.000	Sus_scrofa
ENSPSIG00000008407	SETDB1	85	79.268	ENSTGUG00000004684	SETDB1	61	79.217	Taeniopygia_guttata
ENSPSIG00000008407	SETDB1	67	69.882	ENSTRUG00000014641	setdb1b	51	70.492	Takifugu_rubripes
ENSPSIG00000008407	SETDB1	84	57.388	ENSTNIG00000008065	setdb1b	55	58.366	Tetraodon_nigroviridis
ENSPSIG00000008407	SETDB1	85	80.270	ENSTBEG00000009306	SETDB1	62	79.652	Tupaia_belangeri
ENSPSIG00000008407	SETDB1	85	79.054	ENSTTRG00000006966	SETDB1	57	79.054	Tursiops_truncatus
ENSPSIG00000008407	SETDB1	85	79.432	ENSUAMG00000026724	SETDB1	56	80.108	Ursus_americanus
ENSPSIG00000008407	SETDB1	85	79.567	ENSUMAG00000003141	SETDB1	56	80.244	Ursus_maritimus
ENSPSIG00000008407	SETDB1	85	79.838	ENSVVUG00000011637	SETDB1	57	80.514	Vulpes_vulpes
ENSPSIG00000008407	SETDB1	85	73.810	ENSXETG00000008936	setdb1	57	73.942	Xenopus_tropicalis
ENSPSIG00000008407	SETDB1	84	58.669	ENSXCOG00000019497	setdb1b	59	58.424	Xiphophorus_couchianus
ENSPSIG00000008407	SETDB1	82	62.791	ENSXMAG00000016600	setdb1b	53	57.564	Xiphophorus_maculatus