EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000008474 (Gene tree)
Gene ID: 102459801
Gene Symbol: EDC3
Alias: -
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 49874 bases
Position: chrJH209544.1:4067909-4117782
Accession: 102459801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000009347	FDF	PF09532.10	6e-16	1	1
ENSPSIP00000009336	FDF	PF09532.10	6e-16	1	1
ENSPSIP00000009347	LSM14	PF12701.7	1.9e-10	1	1
ENSPSIP00000009336	LSM14	PF12701.7	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000009382	EDC3-201	1485	XM_006126289	ENSPSIP00000009336	488 (aa)	XP_006126351	K7FMS6
ENSPSIT00000009393	EDC3-202	1467	-	ENSPSIP00000009347	488 (aa)	-	K7FMT7

Gene Model

Click here to download ENSPSIG00000008474's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008474	EDC3	100	83.268	ENSG00000179151	EDC3	100	96.774	Homo_sapiens
ENSPSIG00000008474	EDC3	99	53.216	ENSAPOG00000008655	EDC3	99	52.437	Acanthochromis_polyacanthus
ENSPSIG00000008474	EDC3	100	66.275	ENSAPOG00000010791	edc3	100	65.882	Acanthochromis_polyacanthus
ENSPSIG00000008474	EDC3	100	83.661	ENSAMEG00000008963	EDC3	100	83.465	Ailuropoda_melanoleuca
ENSPSIG00000008474	EDC3	100	65.422	ENSACIG00000017751	edc3	100	65.226	Amphilophus_citrinellus
ENSPSIG00000008474	EDC3	99	56.920	ENSACIG00000005330	EDC3	99	55.945	Amphilophus_citrinellus
ENSPSIG00000008474	EDC3	99	56.226	ENSAOCG00000009103	-	99	54.475	Amphiprion_ocellaris
ENSPSIG00000008474	EDC3	100	66.275	ENSAOCG00000005431	edc3	100	65.882	Amphiprion_ocellaris
ENSPSIG00000008474	EDC3	100	66.275	ENSAPEG00000000968	edc3	100	65.882	Amphiprion_percula
ENSPSIG00000008474	EDC3	99	55.750	ENSAPEG00000007841	EDC3	99	54.669	Amphiprion_percula
ENSPSIG00000008474	EDC3	100	67.191	ENSATEG00000015505	edc3	100	66.405	Anabas_testudineus
ENSPSIG00000008474	EDC3	100	53.269	ENSATEG00000004205	-	100	53.269	Anabas_testudineus
ENSPSIG00000008474	EDC3	89	85.275	ENSAPLG00000008957	EDC3	100	85.275	Anas_platyrhynchos
ENSPSIG00000008474	EDC3	81	86.398	ENSACAG00000000460	-	100	86.398	Anolis_carolinensis
ENSPSIG00000008474	EDC3	100	83.661	ENSANAG00000024078	EDC3	100	83.661	Aotus_nancymaae
ENSPSIG00000008474	EDC3	99	55.556	ENSACLG00000018776	-	99	54.581	Astatotilapia_calliptera
ENSPSIG00000008474	EDC3	100	64.440	ENSACLG00000007232	edc3	100	64.244	Astatotilapia_calliptera
ENSPSIG00000008474	EDC3	100	65.134	ENSAMXG00000001589	edc3	100	65.134	Astyanax_mexicanus
ENSPSIG00000008474	EDC3	100	83.268	ENSBTAG00000007308	EDC3	100	83.268	Bos_taurus
ENSPSIG00000008474	EDC3	100	83.465	ENSCJAG00000017681	EDC3	100	83.465	Callithrix_jacchus
ENSPSIG00000008474	EDC3	100	83.268	ENSCAFG00000017935	EDC3	100	83.071	Canis_familiaris
ENSPSIG00000008474	EDC3	100	83.268	ENSCAFG00020003909	EDC3	100	83.071	Canis_lupus_dingo
ENSPSIG00000008474	EDC3	100	83.465	ENSCHIG00000023658	EDC3	100	83.465	Capra_hircus
ENSPSIG00000008474	EDC3	100	83.071	ENSTSYG00000004822	EDC3	100	83.071	Carlito_syrichta
ENSPSIG00000008474	EDC3	100	82.480	ENSCPOG00000015595	EDC3	100	82.480	Cavia_porcellus
ENSPSIG00000008474	EDC3	100	83.661	ENSCCAG00000021663	EDC3	100	83.661	Cebus_capucinus
ENSPSIG00000008474	EDC3	100	83.661	ENSCATG00000037511	EDC3	100	83.661	Cercocebus_atys
ENSPSIG00000008474	EDC3	100	82.480	ENSCLAG00000005700	EDC3	100	82.480	Chinchilla_lanigera
ENSPSIG00000008474	EDC3	100	83.661	ENSCSAG00000014239	EDC3	100	83.661	Chlorocebus_sabaeus
ENSPSIG00000008474	EDC3	96	96.154	ENSCPBG00000024239	EDC3	100	90.945	Chrysemys_picta_bellii
ENSPSIG00000008474	EDC3	100	36.347	ENSCING00000022142	-	90	37.422	Ciona_intestinalis
ENSPSIG00000008474	EDC3	100	83.661	ENSCANG00000028699	EDC3	100	83.661	Colobus_angolensis_palliatus
ENSPSIG00000008474	EDC3	100	83.465	ENSCGRG00001013874	Edc3	100	83.465	Cricetulus_griseus_chok1gshd
ENSPSIG00000008474	EDC3	100	83.465	ENSCGRG00000011885	Edc3	100	83.465	Cricetulus_griseus_crigri
ENSPSIG00000008474	EDC3	99	66.535	ENSCSEG00000012996	edc3	99	66.339	Cynoglossus_semilaevis
ENSPSIG00000008474	EDC3	100	65.619	ENSCVAG00000008023	edc3	100	65.226	Cyprinodon_variegatus
ENSPSIG00000008474	EDC3	99	64.272	ENSDARG00000051931	edc3	99	64.272	Danio_rerio
ENSPSIG00000008474	EDC3	100	72.093	ENSDNOG00000030661	EDC3	100	72.093	Dasypus_novemcinctus
ENSPSIG00000008474	EDC3	63	92.593	ENSETEG00000002398	-	64	92.593	Echinops_telfairi
ENSPSIG00000008474	EDC3	100	83.661	ENSEASG00005005071	EDC3	100	83.661	Equus_asinus_asinus
ENSPSIG00000008474	EDC3	100	83.661	ENSECAG00000017994	EDC3	100	83.661	Equus_caballus
ENSPSIG00000008474	EDC3	100	59.375	ENSELUG00000007607	EDC3	100	58.398	Esox_lucius
ENSPSIG00000008474	EDC3	100	63.548	ENSELUG00000005794	edc3	100	62.183	Esox_lucius
ENSPSIG00000008474	EDC3	100	83.465	ENSFCAG00000002014	EDC3	100	83.268	Felis_catus
ENSPSIG00000008474	EDC3	94	87.118	ENSFALG00000004543	EDC3	88	87.118	Ficedula_albicollis
ENSPSIG00000008474	EDC3	100	82.283	ENSFDAG00000012582	EDC3	100	82.283	Fukomys_damarensis
ENSPSIG00000008474	EDC3	100	66.798	ENSFHEG00000009375	edc3	100	66.601	Fundulus_heteroclitus
ENSPSIG00000008474	EDC3	100	65.234	ENSGMOG00000002715	edc3	100	65.234	Gadus_morhua
ENSPSIG00000008474	EDC3	100	86.417	ENSGALG00000040181	EDC3	100	86.417	Gallus_gallus
ENSPSIG00000008474	EDC3	100	64.244	ENSGAFG00000014433	edc3	100	63.851	Gambusia_affinis
ENSPSIG00000008474	EDC3	100	65.226	ENSGACG00000009783	edc3	100	65.029	Gasterosteus_aculeatus
ENSPSIG00000008474	EDC3	99	52.907	ENSGACG00000014671	EDC3	99	51.357	Gasterosteus_aculeatus
ENSPSIG00000008474	EDC3	96	95.726	ENSGAGG00000023477	EDC3	100	90.551	Gopherus_agassizii
ENSPSIG00000008474	EDC3	100	83.465	ENSGGOG00000003552	EDC3	100	83.465	Gorilla_gorilla
ENSPSIG00000008474	EDC3	100	64.440	ENSHBUG00000003635	edc3	100	64.244	Haplochromis_burtoni
ENSPSIG00000008474	EDC3	99	55.556	ENSHBUG00000020817	EDC3	99	54.581	Haplochromis_burtoni
ENSPSIG00000008474	EDC3	100	63.601	ENSHCOG00000016834	edc3	100	64.579	Hippocampus_comes
ENSPSIG00000008474	EDC3	99	65.422	ENSIPUG00000005695	edc3	100	65.029	Ictalurus_punctatus
ENSPSIG00000008474	EDC3	100	83.858	ENSSTOG00000013936	EDC3	100	83.858	Ictidomys_tridecemlineatus
ENSPSIG00000008474	EDC3	100	82.874	ENSJJAG00000008074	Edc3	100	82.874	Jaculus_jaculus
ENSPSIG00000008474	EDC3	100	66.012	ENSKMAG00000001243	edc3	100	65.619	Kryptolebias_marmoratus
ENSPSIG00000008474	EDC3	99	53.360	ENSKMAG00000001987	EDC3	99	52.372	Kryptolebias_marmoratus
ENSPSIG00000008474	EDC3	99	54.215	ENSLBEG00000017984	EDC3	99	53.257	Labrus_bergylta
ENSPSIG00000008474	EDC3	100	66.078	ENSLBEG00000013435	edc3	99	65.815	Labrus_bergylta
ENSPSIG00000008474	EDC3	100	73.398	ENSLACG00000014149	EDC3	100	73.398	Latimeria_chalumnae
ENSPSIG00000008474	EDC3	100	64.133	ENSLOCG00000014625	edc3	100	64.202	Lepisosteus_oculatus
ENSPSIG00000008474	EDC3	100	83.071	ENSLAFG00000002992	EDC3	100	83.071	Loxodonta_africana
ENSPSIG00000008474	EDC3	100	83.268	ENSMFAG00000043074	EDC3	100	83.268	Macaca_fascicularis
ENSPSIG00000008474	EDC3	100	83.268	ENSMMUG00000011071	EDC3	100	83.268	Macaca_mulatta
ENSPSIG00000008474	EDC3	100	83.268	ENSMNEG00000035316	EDC3	100	83.268	Macaca_nemestrina
ENSPSIG00000008474	EDC3	100	83.661	ENSMLEG00000030372	EDC3	100	83.661	Mandrillus_leucophaeus
ENSPSIG00000008474	EDC3	100	54.280	ENSMAMG00000005423	-	100	53.502	Mastacembelus_armatus
ENSPSIG00000008474	EDC3	100	65.226	ENSMAMG00000000505	edc3	100	65.029	Mastacembelus_armatus
ENSPSIG00000008474	EDC3	99	56.140	ENSMZEG00005005654	EDC3	99	55.166	Maylandia_zebra
ENSPSIG00000008474	EDC3	100	64.440	ENSMZEG00005004892	edc3	100	64.244	Maylandia_zebra
ENSPSIG00000008474	EDC3	100	85.827	ENSMGAG00000002617	EDC3	100	85.827	Meleagris_gallopavo
ENSPSIG00000008474	EDC3	100	83.858	ENSMICG00000043190	EDC3	100	83.858	Microcebus_murinus
ENSPSIG00000008474	EDC3	100	83.268	ENSMOCG00000016205	Edc3	100	83.268	Microtus_ochrogaster
ENSPSIG00000008474	EDC3	99	66.994	ENSMMOG00000012278	edc3	99	66.929	Mola_mola
ENSPSIG00000008474	EDC3	100	84.646	ENSMODG00000009442	EDC3	100	84.646	Monodelphis_domestica
ENSPSIG00000008474	EDC3	100	66.012	ENSMALG00000008658	edc3	100	65.815	Monopterus_albus
ENSPSIG00000008474	EDC3	100	82.677	MGP_CAROLIEiJ_G0032280	Edc3	100	92.308	Mus_caroli
ENSPSIG00000008474	EDC3	100	82.677	ENSMUSG00000038957	Edc3	100	92.308	Mus_musculus
ENSPSIG00000008474	EDC3	100	82.874	MGP_PahariEiJ_G0015146	Edc3	100	92.308	Mus_pahari
ENSPSIG00000008474	EDC3	100	82.874	MGP_SPRETEiJ_G0033420	Edc3	100	92.308	Mus_spretus
ENSPSIG00000008474	EDC3	100	83.858	ENSMPUG00000017293	EDC3	100	83.661	Mustela_putorius_furo
ENSPSIG00000008474	EDC3	100	82.549	ENSMLUG00000016382	EDC3	100	82.549	Myotis_lucifugus
ENSPSIG00000008474	EDC3	100	82.283	ENSNGAG00000010923	Edc3	100	82.283	Nannospalax_galili
ENSPSIG00000008474	EDC3	100	64.440	ENSNBRG00000002434	edc3	100	64.244	Neolamprologus_brichardi
ENSPSIG00000008474	EDC3	99	55.750	ENSNBRG00000007881	EDC3	99	54.776	Neolamprologus_brichardi
ENSPSIG00000008474	EDC3	100	73.819	ENSNLEG00000014577	EDC3	100	73.819	Nomascus_leucogenys
ENSPSIG00000008474	EDC3	100	84.055	ENSMEUG00000009077	EDC3	100	84.055	Notamacropus_eugenii
ENSPSIG00000008474	EDC3	78	94.444	ENSOPRG00000009540	-	79	94.444	Ochotona_princeps
ENSPSIG00000008474	EDC3	100	64.637	ENSONIG00000008434	edc3	100	64.440	Oreochromis_niloticus
ENSPSIG00000008474	EDC3	99	56.530	ENSONIG00000002932	-	99	55.556	Oreochromis_niloticus
ENSPSIG00000008474	EDC3	81	86.146	ENSOCUG00000017740	EDC3	86	86.146	Oryctolagus_cuniculus
ENSPSIG00000008474	EDC3	100	65.226	ENSORLG00000004883	edc3	100	64.244	Oryzias_latipes
ENSPSIG00000008474	EDC3	99	53.725	ENSORLG00000014399	-	98	52.745	Oryzias_latipes
ENSPSIG00000008474	EDC3	100	65.234	ENSORLG00020012262	edc3	100	64.258	Oryzias_latipes_hni
ENSPSIG00000008474	EDC3	99	53.725	ENSORLG00020019446	-	99	52.745	Oryzias_latipes_hni
ENSPSIG00000008474	EDC3	99	52.941	ENSORLG00015017635	-	95	51.961	Oryzias_latipes_hsok
ENSPSIG00000008474	EDC3	100	65.039	ENSORLG00015005634	edc3	100	64.062	Oryzias_latipes_hsok
ENSPSIG00000008474	EDC3	100	66.602	ENSOMEG00000014026	edc3	100	65.625	Oryzias_melastigma
ENSPSIG00000008474	EDC3	99	53.529	ENSOMEG00000017354	EDC3	99	52.549	Oryzias_melastigma
ENSPSIG00000008474	EDC3	100	83.661	ENSOGAG00000014441	EDC3	100	83.661	Otolemur_garnettii
ENSPSIG00000008474	EDC3	100	82.711	ENSOARG00000003476	EDC3	100	83.104	Ovis_aries
ENSPSIG00000008474	EDC3	100	83.465	ENSPPAG00000040143	EDC3	100	83.465	Pan_paniscus
ENSPSIG00000008474	EDC3	100	83.661	ENSPPRG00000006257	EDC3	100	83.465	Panthera_pardus
ENSPSIG00000008474	EDC3	100	83.661	ENSPTIG00000017424	EDC3	100	83.465	Panthera_tigris_altaica
ENSPSIG00000008474	EDC3	100	83.465	ENSPTRG00000007279	EDC3	100	83.465	Pan_troglodytes
ENSPSIG00000008474	EDC3	100	83.661	ENSPANG00000015997	EDC3	100	83.661	Papio_anubis
ENSPSIG00000008474	EDC3	99	62.305	ENSPKIG00000019810	EDC3	99	63.086	Paramormyrops_kingsleyae
ENSPSIG00000008474	EDC3	100	64.981	ENSPKIG00000004416	edc3	100	66.148	Paramormyrops_kingsleyae
ENSPSIG00000008474	EDC3	100	63.992	ENSPMGG00000007223	edc3	100	63.209	Periophthalmus_magnuspinnatus
ENSPSIG00000008474	EDC3	100	83.268	ENSPEMG00000015260	Edc3	100	83.268	Peromyscus_maniculatus_bairdii
ENSPSIG00000008474	EDC3	100	83.465	ENSPCIG00000006276	EDC3	70	83.465	Phascolarctos_cinereus
ENSPSIG00000008474	EDC3	100	64.786	ENSPFOG00000012204	edc3	100	64.397	Poecilia_formosa
ENSPSIG00000008474	EDC3	100	64.786	ENSPLAG00000014420	edc3	100	64.397	Poecilia_latipinna
ENSPSIG00000008474	EDC3	100	64.786	ENSPMEG00000023289	edc3	100	64.397	Poecilia_mexicana
ENSPSIG00000008474	EDC3	100	65.422	ENSPREG00000016022	edc3	100	65.029	Poecilia_reticulata
ENSPSIG00000008474	EDC3	100	82.087	ENSPPYG00000006642	EDC3	100	82.087	Pongo_abelii
ENSPSIG00000008474	EDC3	87	94.444	ENSPCAG00000002802	EDC3	88	94.444	Procavia_capensis
ENSPSIG00000008474	EDC3	100	83.465	ENSPCOG00000013364	EDC3	100	83.465	Propithecus_coquereli
ENSPSIG00000008474	EDC3	100	82.874	ENSPVAG00000014733	EDC3	100	82.874	Pteropus_vampyrus
ENSPSIG00000008474	EDC3	100	64.440	ENSPNYG00000021797	edc3	100	64.244	Pundamilia_nyererei
ENSPSIG00000008474	EDC3	99	55.556	ENSPNYG00000009669	EDC3	99	54.581	Pundamilia_nyererei
ENSPSIG00000008474	EDC3	100	66.216	ENSPNAG00000019657	edc3	100	66.023	Pygocentrus_nattereri
ENSPSIG00000008474	EDC3	99	82.970	ENSRNOG00000019579	Edc3	99	82.970	Rattus_norvegicus
ENSPSIG00000008474	EDC3	100	83.268	ENSRBIG00000019488	EDC3	100	83.268	Rhinopithecus_bieti
ENSPSIG00000008474	EDC3	100	83.268	ENSRROG00000034959	EDC3	100	83.268	Rhinopithecus_roxellana
ENSPSIG00000008474	EDC3	100	83.858	ENSSBOG00000004896	EDC3	100	83.858	Saimiri_boliviensis_boliviensis
ENSPSIG00000008474	EDC3	94	88.210	ENSSHAG00000015075	EDC3	89	88.210	Sarcophilus_harrisii
ENSPSIG00000008474	EDC3	99	67.383	ENSSFOG00015016939	edc3	99	68.164	Scleropages_formosus
ENSPSIG00000008474	EDC3	81	77.612	ENSSFOG00015002439	edc3	100	61.089	Scleropages_formosus
ENSPSIG00000008474	EDC3	100	66.798	ENSSMAG00000010695	edc3	100	66.601	Scophthalmus_maximus
ENSPSIG00000008474	EDC3	99	54.102	ENSSMAG00000010176	-	99	53.125	Scophthalmus_maximus
ENSPSIG00000008474	EDC3	99	55.664	ENSSDUG00000007671	EDC3	99	54.688	Seriola_dumerili
ENSPSIG00000008474	EDC3	100	67.059	ENSSDUG00000021844	edc3	100	66.601	Seriola_dumerili
ENSPSIG00000008474	EDC3	100	67.059	ENSSLDG00000022046	edc3	100	66.601	Seriola_lalandi_dorsalis
ENSPSIG00000008474	EDC3	74	89.899	ENSSARG00000003907	EDC3	71	89.899	Sorex_araneus
ENSPSIG00000008474	EDC3	100	86.417	ENSSPUG00000008232	EDC3	100	86.417	Sphenodon_punctatus
ENSPSIG00000008474	EDC3	100	66.994	ENSSPAG00000010009	edc3	100	66.601	Stegastes_partitus
ENSPSIG00000008474	EDC3	99	55.078	ENSSPAG00000020327	EDC3	99	54.102	Stegastes_partitus
ENSPSIG00000008474	EDC3	100	82.874	ENSSSCG00000001903	EDC3	100	82.874	Sus_scrofa
ENSPSIG00000008474	EDC3	100	85.630	ENSTGUG00000004007	EDC3	100	85.630	Taeniopygia_guttata
ENSPSIG00000008474	EDC3	100	67.191	ENSTRUG00000017078	edc3	100	66.405	Takifugu_rubripes
ENSPSIG00000008474	EDC3	100	66.145	ENSTNIG00000016047	edc3	100	66.145	Tetraodon_nigroviridis
ENSPSIG00000008474	EDC3	100	82.677	ENSTTRG00000007990	EDC3	100	82.677	Tursiops_truncatus
ENSPSIG00000008474	EDC3	100	83.661	ENSUAMG00000026710	-	100	83.465	Ursus_americanus
ENSPSIG00000008474	EDC3	100	83.661	ENSUMAG00000005006	EDC3	96	83.465	Ursus_maritimus
ENSPSIG00000008474	EDC3	78	81.481	ENSVPAG00000003499	-	79	81.481	Vicugna_pacos
ENSPSIG00000008474	EDC3	100	83.268	ENSVVUG00000018601	EDC3	100	83.071	Vulpes_vulpes
ENSPSIG00000008474	EDC3	63	82.848	ENSXETG00000010622	edc3	99	78.161	Xenopus_tropicalis
ENSPSIG00000008474	EDC3	100	65.815	ENSXMAG00000007377	edc3	100	65.422	Xiphophorus_maculatus