EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000008580 (Gene tree)
Gene ID: 102454765
Gene Symbol: SNRNP200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 49530 bases
Position: chrJH206142.1:132394-181923
Accession: 102454765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000009777	ResIII	PF04851.15	6.2e-25	1	2
ENSPSIP00000009777	ResIII	PF04851.15	6.2e-25	2	2
ENSPSIP00000009777	DEAD	PF00270.29	2.4e-51	1	2
ENSPSIP00000009777	DEAD	PF00270.29	2.4e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000009825	SNRNP200-201	6408	XM_006113788	ENSPSIP00000009777	2135 (aa)	XP_006113850	K7FP17

Gene Model

Click here to download ENSPSIG00000008580's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000008580	SNRNP200	78	43.634	ENSPSIG00000002620	-	97	43.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008580	SNRNP200	100	96.724	ENSG00000144028	SNRNP200	100	96.724	Homo_sapiens
ENSPSIG00000008580	SNRNP200	99	90.094	ENSAPOG00000010223	snrnp200	99	90.033	Acanthochromis_polyacanthus
ENSPSIG00000008580	SNRNP200	100	96.771	ENSAMEG00000008996	SNRNP200	100	96.771	Ailuropoda_melanoleuca
ENSPSIG00000008580	SNRNP200	97	89.085	ENSACIG00000001764	snrnp200	98	89.085	Amphilophus_citrinellus
ENSPSIG00000008580	SNRNP200	99	90.000	ENSAOCG00000024593	snrnp200	100	89.085	Amphiprion_ocellaris
ENSPSIG00000008580	SNRNP200	97	89.139	ENSAPEG00000012554	snrnp200	100	89.139	Amphiprion_percula
ENSPSIG00000008580	SNRNP200	99	89.859	ENSATEG00000022522	snrnp200	99	89.799	Anabas_testudineus
ENSPSIG00000008580	SNRNP200	99	97.361	ENSAPLG00000004313	SNRNP200	100	97.361	Anas_platyrhynchos
ENSPSIG00000008580	SNRNP200	99	96.568	ENSACAG00000000434	SNRNP200	100	96.568	Anolis_carolinensis
ENSPSIG00000008580	SNRNP200	100	92.214	ENSANAG00000036625	SNRNP200	100	92.214	Aotus_nancymaae
ENSPSIG00000008580	SNRNP200	99	89.671	ENSACLG00000011188	snrnp200	99	89.612	Astatotilapia_calliptera
ENSPSIG00000008580	SNRNP200	99	89.155	ENSAMXG00000005684	snrnp200	99	89.097	Astyanax_mexicanus
ENSPSIG00000008580	SNRNP200	100	96.303	ENSBTAG00000000848	SNRNP200	100	96.303	Bos_taurus
ENSPSIG00000008580	SNRNP200	100	96.724	ENSCJAG00000007514	SNRNP200	100	97.269	Callithrix_jacchus
ENSPSIG00000008580	SNRNP200	100	95.989	ENSCAFG00020019979	SNRNP200	100	97.269	Canis_lupus_dingo
ENSPSIG00000008580	SNRNP200	100	96.490	ENSCHIG00000020611	SNRNP200	100	96.490	Capra_hircus
ENSPSIG00000008580	SNRNP200	100	96.771	ENSTSYG00000010467	SNRNP200	100	97.269	Carlito_syrichta
ENSPSIG00000008580	SNRNP200	99	96.241	ENSCAPG00000017234	SNRNP200	99	96.241	Cavia_aperea
ENSPSIG00000008580	SNRNP200	100	96.537	ENSCPOG00000006776	SNRNP200	100	96.537	Cavia_porcellus
ENSPSIG00000008580	SNRNP200	100	96.724	ENSCCAG00000033962	SNRNP200	100	97.269	Cebus_capucinus
ENSPSIG00000008580	SNRNP200	100	96.724	ENSCATG00000015790	SNRNP200	100	97.269	Cercocebus_atys
ENSPSIG00000008580	SNRNP200	100	96.537	ENSCLAG00000004116	SNRNP200	100	96.537	Chinchilla_lanigera
ENSPSIG00000008580	SNRNP200	100	96.678	ENSCSAG00000017369	SNRNP200	100	96.678	Chlorocebus_sabaeus
ENSPSIG00000008580	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSPSIG00000008580	SNRNP200	100	98.224	ENSCPBG00000022571	SNRNP200	100	98.224	Chrysemys_picta_bellii
ENSPSIG00000008580	SNRNP200	99	76.237	ENSCING00000005082	-	99	76.528	Ciona_intestinalis
ENSPSIG00000008580	SNRNP200	100	91.270	ENSCANG00000033932	SNRNP200	100	96.565	Colobus_angolensis_palliatus
ENSPSIG00000008580	SNRNP200	100	96.584	ENSCGRG00001022610	Snrnp200	100	96.584	Cricetulus_griseus_chok1gshd
ENSPSIG00000008580	SNRNP200	100	96.028	ENSCGRG00000016472	Snrnp200	100	96.028	Cricetulus_griseus_crigri
ENSPSIG00000008580	SNRNP200	100	88.816	ENSCSEG00000016399	snrnp200	100	88.816	Cynoglossus_semilaevis
ENSPSIG00000008580	SNRNP200	100	84.932	ENSCVAG00000017631	snrnp200	99	84.932	Cyprinodon_variegatus
ENSPSIG00000008580	SNRNP200	100	89.378	ENSDARG00000077536	snrnp200	99	89.378	Danio_rerio
ENSPSIG00000008580	SNRNP200	100	95.367	ENSDNOG00000011227	SNRNP200	100	95.367	Dasypus_novemcinctus
ENSPSIG00000008580	SNRNP200	100	93.931	ENSDORG00000005861	Snrnp200	100	93.931	Dipodomys_ordii
ENSPSIG00000008580	SNRNP200	100	73.802	FBgn0263599	l(3)72Ab	99	73.709	Drosophila_melanogaster
ENSPSIG00000008580	SNRNP200	95	98.279	ENSETEG00000000162	SNRNP200	74	98.279	Echinops_telfairi
ENSPSIG00000008580	SNRNP200	83	80.000	ENSEBUG00000016524	snrnp200	95	80.000	Eptatretus_burgeri
ENSPSIG00000008580	SNRNP200	100	95.666	ENSEASG00005001884	SNRNP200	100	95.666	Equus_asinus_asinus
ENSPSIG00000008580	SNRNP200	100	96.771	ENSECAG00000019675	SNRNP200	99	98.239	Equus_caballus
ENSPSIG00000008580	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSPSIG00000008580	SNRNP200	99	89.812	ENSELUG00000018948	snrnp200	99	89.752	Esox_lucius
ENSPSIG00000008580	SNRNP200	100	96.818	ENSFCAG00000010699	SNRNP200	100	96.818	Felis_catus
ENSPSIG00000008580	SNRNP200	93	92.035	ENSFALG00000001368	-	94	92.035	Ficedula_albicollis
ENSPSIG00000008580	SNRNP200	100	96.490	ENSFDAG00000004683	SNRNP200	100	96.490	Fukomys_damarensis
ENSPSIG00000008580	SNRNP200	100	87.178	ENSFHEG00000003786	snrnp200	99	87.178	Fundulus_heteroclitus
ENSPSIG00000008580	SNRNP200	100	88.790	ENSGMOG00000004881	snrnp200	99	88.744	Gadus_morhua
ENSPSIG00000008580	SNRNP200	100	87.319	ENSGAFG00000010807	snrnp200	99	87.319	Gambusia_affinis
ENSPSIG00000008580	SNRNP200	100	89.076	ENSGACG00000011474	snrnp200	99	88.982	Gasterosteus_aculeatus
ENSPSIG00000008580	SNRNP200	95	98.252	ENSGAGG00000016069	SNRNP200	99	98.252	Gopherus_agassizii
ENSPSIG00000008580	SNRNP200	100	96.724	ENSGGOG00000005174	SNRNP200	100	97.269	Gorilla_gorilla
ENSPSIG00000008580	SNRNP200	97	86.880	ENSHBUG00000011322	snrnp200	99	86.926	Haplochromis_burtoni
ENSPSIG00000008580	SNRNP200	100	96.584	ENSHGLG00000006654	SNRNP200	100	96.584	Heterocephalus_glaber_female
ENSPSIG00000008580	SNRNP200	100	96.584	ENSHGLG00100018594	SNRNP200	100	96.584	Heterocephalus_glaber_male
ENSPSIG00000008580	SNRNP200	100	96.724	ENSSTOG00000016351	SNRNP200	100	96.724	Ictidomys_tridecemlineatus
ENSPSIG00000008580	SNRNP200	100	96.584	ENSJJAG00000023659	Snrnp200	100	96.584	Jaculus_jaculus
ENSPSIG00000008580	SNRNP200	100	86.754	ENSKMAG00000003665	snrnp200	99	86.754	Kryptolebias_marmoratus
ENSPSIG00000008580	SNRNP200	100	89.565	ENSLBEG00000021585	snrnp200	99	89.565	Labrus_bergylta
ENSPSIG00000008580	SNRNP200	82	93.287	ENSLACG00000000226	SNRNP200	99	93.287	Latimeria_chalumnae
ENSPSIG00000008580	SNRNP200	100	91.109	ENSLOCG00000015198	snrnp200	99	91.109	Lepisosteus_oculatus
ENSPSIG00000008580	SNRNP200	100	96.490	ENSLAFG00000015626	SNRNP200	100	96.490	Loxodonta_africana
ENSPSIG00000008580	SNRNP200	100	96.678	ENSMFAG00000040174	SNRNP200	100	97.269	Macaca_fascicularis
ENSPSIG00000008580	SNRNP200	100	96.678	ENSMMUG00000023261	SNRNP200	100	97.269	Macaca_mulatta
ENSPSIG00000008580	SNRNP200	100	96.631	ENSMNEG00000032398	SNRNP200	100	97.117	Macaca_nemestrina
ENSPSIG00000008580	SNRNP200	100	96.724	ENSMLEG00000019083	SNRNP200	100	97.269	Mandrillus_leucophaeus
ENSPSIG00000008580	SNRNP200	100	89.196	ENSMAMG00000007851	snrnp200	99	89.149	Mastacembelus_armatus
ENSPSIG00000008580	SNRNP200	97	86.880	ENSMZEG00005010787	snrnp200	99	86.926	Maylandia_zebra
ENSPSIG00000008580	SNRNP200	97	96.905	ENSMGAG00000001831	SNRNP200	100	96.905	Meleagris_gallopavo
ENSPSIG00000008580	SNRNP200	100	96.631	ENSMAUG00000011825	Snrnp200	100	96.631	Mesocricetus_auratus
ENSPSIG00000008580	SNRNP200	100	96.771	ENSMICG00000004710	SNRNP200	100	97.269	Microcebus_murinus
ENSPSIG00000008580	SNRNP200	100	94.104	ENSMOCG00000011814	Snrnp200	100	94.104	Microtus_ochrogaster
ENSPSIG00000008580	SNRNP200	99	88.028	ENSMMOG00000014167	snrnp200	99	87.974	Mola_mola
ENSPSIG00000008580	SNRNP200	100	96.724	ENSMODG00000008475	SNRNP200	100	96.724	Monodelphis_domestica
ENSPSIG00000008580	SNRNP200	99	89.859	ENSMALG00000001973	snrnp200	99	89.799	Monopterus_albus
ENSPSIG00000008580	SNRNP200	100	96.444	MGP_CAROLIEiJ_G0024250	Snrnp200	100	96.444	Mus_caroli
ENSPSIG00000008580	SNRNP200	100	96.490	ENSMUSG00000003660	Snrnp200	100	96.490	Mus_musculus
ENSPSIG00000008580	SNRNP200	100	96.537	MGP_PahariEiJ_G0025695	Snrnp200	100	96.537	Mus_pahari
ENSPSIG00000008580	SNRNP200	100	96.490	MGP_SPRETEiJ_G0025170	Snrnp200	100	96.685	Mus_spretus
ENSPSIG00000008580	SNRNP200	100	96.865	ENSMPUG00000008949	SNRNP200	100	96.865	Mustela_putorius_furo
ENSPSIG00000008580	SNRNP200	100	92.981	ENSMLUG00000027511	-	100	92.981	Myotis_lucifugus
ENSPSIG00000008580	SNRNP200	100	96.447	ENSMLUG00000010493	SNRNP200	100	96.447	Myotis_lucifugus
ENSPSIG00000008580	SNRNP200	100	96.724	ENSNGAG00000021993	Snrnp200	100	96.724	Nannospalax_galili
ENSPSIG00000008580	SNRNP200	90	89.275	ENSNBRG00000017960	snrnp200	98	89.327	Neolamprologus_brichardi
ENSPSIG00000008580	SNRNP200	100	91.961	ENSNLEG00000000025	SNRNP200	100	93.627	Nomascus_leucogenys
ENSPSIG00000008580	SNRNP200	100	99.048	ENSMEUG00000010532	SNRNP200	79	99.048	Notamacropus_eugenii
ENSPSIG00000008580	SNRNP200	100	92.840	ENSOPRG00000015464	SNRNP200	100	92.840	Ochotona_princeps
ENSPSIG00000008580	SNRNP200	100	96.584	ENSODEG00000008366	SNRNP200	100	96.584	Octodon_degus
ENSPSIG00000008580	SNRNP200	99	89.577	ENSONIG00000010714	snrnp200	99	89.518	Oreochromis_niloticus
ENSPSIG00000008580	SNRNP200	100	96.631	ENSOCUG00000009864	SNRNP200	100	96.631	Oryctolagus_cuniculus
ENSPSIG00000008580	SNRNP200	100	89.471	ENSORLG00000012286	snrnp200	100	89.471	Oryzias_latipes
ENSPSIG00000008580	SNRNP200	100	89.518	ENSORLG00020004648	snrnp200	100	89.518	Oryzias_latipes_hni
ENSPSIG00000008580	SNRNP200	100	89.471	ENSORLG00015019114	snrnp200	100	89.471	Oryzias_latipes_hsok
ENSPSIG00000008580	SNRNP200	99	89.671	ENSOMEG00000011834	snrnp200	99	89.612	Oryzias_melastigma
ENSPSIG00000008580	SNRNP200	100	96.771	ENSOGAG00000006879	SNRNP200	100	96.771	Otolemur_garnettii
ENSPSIG00000008580	SNRNP200	100	95.557	ENSOARG00000013949	SNRNP200	100	95.557	Ovis_aries
ENSPSIG00000008580	SNRNP200	100	96.724	ENSPPAG00000041559	SNRNP200	100	97.269	Pan_paniscus
ENSPSIG00000008580	SNRNP200	100	96.818	ENSPPRG00000004435	SNRNP200	100	96.818	Panthera_pardus
ENSPSIG00000008580	SNRNP200	100	96.397	ENSPTIG00000006380	SNRNP200	100	96.397	Panthera_tigris_altaica
ENSPSIG00000008580	SNRNP200	100	96.724	ENSPTRG00000012230	SNRNP200	100	97.269	Pan_troglodytes
ENSPSIG00000008580	SNRNP200	100	96.724	ENSPANG00000006017	SNRNP200	100	97.269	Papio_anubis
ENSPSIG00000008580	SNRNP200	100	90.033	ENSPKIG00000014762	snrnp200	99	90.033	Paramormyrops_kingsleyae
ENSPSIG00000008580	SNRNP200	100	96.865	ENSPCIG00000023050	SNRNP200	100	96.865	Phascolarctos_cinereus
ENSPSIG00000008580	SNRNP200	100	89.757	ENSPFOG00000015110	snrnp200	99	89.757	Poecilia_formosa
ENSPSIG00000008580	SNRNP200	97	89.347	ENSPLAG00000006711	snrnp200	99	89.347	Poecilia_latipinna
ENSPSIG00000008580	SNRNP200	97	89.292	ENSPMEG00000021166	snrnp200	99	89.292	Poecilia_mexicana
ENSPSIG00000008580	SNRNP200	100	89.799	ENSPREG00000008875	snrnp200	99	89.799	Poecilia_reticulata
ENSPSIG00000008580	SNRNP200	100	96.724	ENSPPYG00000012068	SNRNP200	100	96.724	Pongo_abelii
ENSPSIG00000008580	SNRNP200	95	96.795	ENSPCAG00000008536	SNRNP200	86	96.795	Procavia_capensis
ENSPSIG00000008580	SNRNP200	100	96.724	ENSPCOG00000024608	SNRNP200	100	97.117	Propithecus_coquereli
ENSPSIG00000008580	SNRNP200	96	98.983	ENSPVAG00000005860	SNRNP200	92	98.983	Pteropus_vampyrus
ENSPSIG00000008580	SNRNP200	99	85.206	ENSPNYG00000017476	snrnp200	99	85.161	Pundamilia_nyererei
ENSPSIG00000008580	SNRNP200	100	84.839	ENSPNAG00000010998	snrnp200	99	84.839	Pygocentrus_nattereri
ENSPSIG00000008580	SNRNP200	100	96.631	ENSRNOG00000012157	Snrnp200	100	96.631	Rattus_norvegicus
ENSPSIG00000008580	SNRNP200	100	96.724	ENSRBIG00000044690	-	100	97.269	Rhinopithecus_bieti
ENSPSIG00000008580	SNRNP200	100	96.724	ENSRROG00000037952	-	100	97.269	Rhinopithecus_roxellana
ENSPSIG00000008580	SNRNP200	100	96.724	ENSSBOG00000035471	SNRNP200	100	97.269	Saimiri_boliviensis_boliviensis
ENSPSIG00000008580	SNRNP200	97	96.712	ENSSHAG00000000758	SNRNP200	100	96.712	Sarcophilus_harrisii
ENSPSIG00000008580	SNRNP200	99	90.141	ENSSFOG00015018826	snrnp200	99	90.080	Scleropages_formosus
ENSPSIG00000008580	SNRNP200	99	89.624	ENSSMAG00000005463	snrnp200	99	89.565	Scophthalmus_maximus
ENSPSIG00000008580	SNRNP200	99	89.765	ENSSDUG00000021410	snrnp200	99	89.705	Seriola_dumerili
ENSPSIG00000008580	SNRNP200	99	89.765	ENSSLDG00000010884	snrnp200	99	89.705	Seriola_lalandi_dorsalis
ENSPSIG00000008580	SNRNP200	95	98.128	ENSSARG00000010728	SNRNP200	96	98.123	Sorex_araneus
ENSPSIG00000008580	SNRNP200	100	96.818	ENSSPUG00000003726	-	100	96.818	Sphenodon_punctatus
ENSPSIG00000008580	SNRNP200	99	89.953	ENSSPAG00000001842	snrnp200	99	89.892	Stegastes_partitus
ENSPSIG00000008580	SNRNP200	100	96.678	ENSSSCG00000008127	SNRNP200	100	96.678	Sus_scrofa
ENSPSIG00000008580	SNRNP200	99	86.818	ENSTGUG00000014475	-	100	86.818	Taeniopygia_guttata
ENSPSIG00000008580	SNRNP200	99	89.484	ENSTRUG00000001307	snrnp200	99	89.424	Takifugu_rubripes
ENSPSIG00000008580	SNRNP200	100	84.729	ENSTNIG00000004320	snrnp200	100	78.188	Tetraodon_nigroviridis
ENSPSIG00000008580	SNRNP200	83	98.788	ENSTBEG00000003329	-	67	98.788	Tupaia_belangeri
ENSPSIG00000008580	SNRNP200	100	96.444	ENSTTRG00000004983	SNRNP200	100	96.444	Tursiops_truncatus
ENSPSIG00000008580	SNRNP200	75	91.208	ENSUAMG00000008395	-	95	91.384	Ursus_americanus
ENSPSIG00000008580	SNRNP200	100	96.818	ENSUMAG00000012385	SNRNP200	100	96.818	Ursus_maritimus
ENSPSIG00000008580	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSPSIG00000008580	SNRNP200	100	96.592	ENSVVUG00000026247	SNRNP200	100	97.269	Vulpes_vulpes
ENSPSIG00000008580	SNRNP200	100	93.271	ENSXETG00000001243	snrnp200	100	93.271	Xenopus_tropicalis
ENSPSIG00000008580	SNRNP200	97	89.567	ENSXMAG00000002058	snrnp200	98	89.567	Xiphophorus_maculatus