EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000008582 (Gene tree)
Gene ID: 102446588
Gene Symbol: SALL1
Alias: -
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 16120 bases
Position: chrJH208257.1:5172756-5188875
Accession: 102446588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000009434	zf-C2H2	PF00096.26	2.9e-34	1	6
ENSPSIP00000009434	zf-C2H2	PF00096.26	2.9e-34	2	6
ENSPSIP00000009434	zf-C2H2	PF00096.26	2.9e-34	3	6
ENSPSIP00000009434	zf-C2H2	PF00096.26	2.9e-34	4	6
ENSPSIP00000009434	zf-C2H2	PF00096.26	2.9e-34	5	6
ENSPSIP00000009434	zf-C2H2	PF00096.26	2.9e-34	6	6
ENSPSIP00000009434	zf-met	PF12874.7	5.1e-25	1	5
ENSPSIP00000009434	zf-met	PF12874.7	5.1e-25	2	5
ENSPSIP00000009434	zf-met	PF12874.7	5.1e-25	3	5
ENSPSIP00000009434	zf-met	PF12874.7	5.1e-25	4	5
ENSPSIP00000009434	zf-met	PF12874.7	5.1e-25	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000009481	SALL1-201	5820	XM_006121131	ENSPSIP00000009434	1308 (aa)	XP_006121193	K7FN24

Gene Model

Click here to download ENSPSIG00000008582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000008582	SALL1	56	38.710	ENSPSIG00000003152	-	78	38.710
ENSPSIG00000008582	SALL1	98	49.474	ENSPSIG00000008556	SALL3	98	52.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008582	SALL1	99	85.865	ENSG00000103449	SALL1	100	86.308	Homo_sapiens
ENSPSIG00000008582	SALL1	100	70.699	ENSAPOG00000022764	sall1a	100	70.495	Acanthochromis_polyacanthus
ENSPSIG00000008582	SALL1	99	84.604	ENSAMEG00000006817	SALL1	100	84.615	Ailuropoda_melanoleuca
ENSPSIG00000008582	SALL1	100	69.127	ENSACIG00000004231	sall1a	100	69.225	Amphilophus_citrinellus
ENSPSIG00000008582	SALL1	100	70.774	ENSAOCG00000002800	sall1a	100	70.571	Amphiprion_ocellaris
ENSPSIG00000008582	SALL1	100	70.774	ENSAPEG00000010179	sall1a	100	70.571	Amphiprion_percula
ENSPSIG00000008582	SALL1	99	69.827	ENSATEG00000003006	sall1a	99	69.774	Anabas_testudineus
ENSPSIG00000008582	SALL1	100	94.576	ENSAPLG00000003356	SALL1	100	94.576	Anas_platyrhynchos
ENSPSIG00000008582	SALL1	98	87.345	ENSACAG00000014399	SALL1	96	87.112	Anolis_carolinensis
ENSPSIG00000008582	SALL1	99	85.995	ENSANAG00000027238	SALL1	100	86.006	Aotus_nancymaae
ENSPSIG00000008582	SALL1	100	69.277	ENSACLG00000017148	sall1a	100	69.300	Astatotilapia_calliptera
ENSPSIG00000008582	SALL1	99	52.757	ENSAMXG00000017702	sall1b	99	53.081	Astyanax_mexicanus
ENSPSIG00000008582	SALL1	100	70.915	ENSAMXG00000018599	sall1a	100	70.743	Astyanax_mexicanus
ENSPSIG00000008582	SALL1	100	84.954	ENSBTAG00000008544	SALL1	100	85.106	Bos_taurus
ENSPSIG00000008582	SALL1	99	85.920	ENSCJAG00000001740	SALL1	100	86.157	Callithrix_jacchus
ENSPSIG00000008582	SALL1	99	84.278	ENSCAFG00000009755	SALL1	100	84.819	Canis_familiaris
ENSPSIG00000008582	SALL1	99	84.278	ENSCAFG00020002842	SALL1	100	84.819	Canis_lupus_dingo
ENSPSIG00000008582	SALL1	100	84.306	ENSCHIG00000026074	SALL1	100	84.306	Capra_hircus
ENSPSIG00000008582	SALL1	99	87.205	ENSTSYG00000029464	SALL1	100	86.834	Carlito_syrichta
ENSPSIG00000008582	SALL1	98	86.858	ENSCPOG00000006564	SALL1	99	86.703	Cavia_porcellus
ENSPSIG00000008582	SALL1	99	83.397	ENSCCAG00000001639	SALL1	100	83.712	Cebus_capucinus
ENSPSIG00000008582	SALL1	99	86.343	ENSCATG00000004982	SALL1	100	86.429	Cercocebus_atys
ENSPSIG00000008582	SALL1	99	87.043	ENSCLAG00000006380	SALL1	100	86.976	Chinchilla_lanigera
ENSPSIG00000008582	SALL1	99	85.076	ENSCSAG00000005319	SALL1	100	85.390	Chlorocebus_sabaeus
ENSPSIG00000008582	SALL1	67	86.957	ENSCHOG00000000800	-	69	86.957	Choloepus_hoffmanni
ENSPSIG00000008582	SALL1	100	97.479	ENSCPBG00000015924	SALL1	100	97.607	Chrysemys_picta_bellii
ENSPSIG00000008582	SALL1	99	86.333	ENSCANG00000036664	SALL1	100	87.060	Colobus_angolensis_palliatus
ENSPSIG00000008582	SALL1	99	83.751	ENSCGRG00001023314	-	100	83.384	Cricetulus_griseus_chok1gshd
ENSPSIG00000008582	SALL1	98	83.811	ENSCGRG00000009496	Sall1	100	83.514	Cricetulus_griseus_crigri
ENSPSIG00000008582	SALL1	99	68.189	ENSCSEG00000009349	sall1a	99	68.464	Cynoglossus_semilaevis
ENSPSIG00000008582	SALL1	90	68.439	ENSCVAG00000020513	sall1a	99	68.128	Cyprinodon_variegatus
ENSPSIG00000008582	SALL1	100	70.690	ENSDARG00000074319	sall1a	100	70.655	Danio_rerio
ENSPSIG00000008582	SALL1	99	48.084	ENSDARG00000075891	sall1b	99	47.934	Danio_rerio
ENSPSIG00000008582	SALL1	99	85.921	ENSDNOG00000016413	SALL1	100	85.627	Dasypus_novemcinctus
ENSPSIG00000008582	SALL1	98	87.092	ENSETEG00000015150	SALL1	99	87.092	Echinops_telfairi
ENSPSIG00000008582	SALL1	99	36.745	ENSEBUG00000008798	SALL1	99	36.858	Eptatretus_burgeri
ENSPSIG00000008582	SALL1	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSPSIG00000008582	SALL1	99	85.671	ENSEASG00005014602	SALL1	100	85.834	Equus_asinus_asinus
ENSPSIG00000008582	SALL1	91	83.431	ENSECAG00000011334	SALL1	99	83.684	Equus_caballus
ENSPSIG00000008582	SALL1	98	85.039	ENSEEUG00000002014	SALL1	100	84.818	Erinaceus_europaeus
ENSPSIG00000008582	SALL1	100	52.937	ENSELUG00000017774	-	100	52.792	Esox_lucius
ENSPSIG00000008582	SALL1	100	67.949	ENSELUG00000006159	sall1a	100	67.781	Esox_lucius
ENSPSIG00000008582	SALL1	99	84.043	ENSFCAG00000024654	SALL1	100	84.672	Felis_catus
ENSPSIG00000008582	SALL1	100	93.354	ENSFALG00000000074	SALL1	100	93.354	Ficedula_albicollis
ENSPSIG00000008582	SALL1	100	69.323	ENSFHEG00000012579	sall1a	100	69.121	Fundulus_heteroclitus
ENSPSIG00000008582	SALL1	84	63.462	ENSFHEG00000008424	-	100	61.538	Fundulus_heteroclitus
ENSPSIG00000008582	SALL1	98	41.245	ENSGMOG00000013383	-	99	41.673	Gadus_morhua
ENSPSIG00000008582	SALL1	100	68.042	ENSGMOG00000006103	sall1a	100	67.967	Gadus_morhua
ENSPSIG00000008582	SALL1	100	93.736	ENSGALG00000039238	SALL1	100	93.736	Gallus_gallus
ENSPSIG00000008582	SALL1	100	69.790	ENSGAFG00000009964	sall1a	100	69.617	Gambusia_affinis
ENSPSIG00000008582	SALL1	99	68.976	ENSGACG00000016702	sall1a	99	68.947	Gasterosteus_aculeatus
ENSPSIG00000008582	SALL1	100	96.715	ENSGAGG00000013979	SALL1	100	96.782	Gopherus_agassizii
ENSPSIG00000008582	SALL1	99	85.941	ENSGGOG00000000663	SALL1	100	86.027	Gorilla_gorilla
ENSPSIG00000008582	SALL1	100	69.277	ENSHBUG00000022005	sall1a	100	69.300	Haplochromis_burtoni
ENSPSIG00000008582	SALL1	99	86.204	ENSHGLG00000004288	-	100	85.910	Heterocephalus_glaber_female
ENSPSIG00000008582	SALL1	99	86.204	ENSHGLG00100017496	SALL1	100	85.910	Heterocephalus_glaber_male
ENSPSIG00000008582	SALL1	100	67.459	ENSHCOG00000000974	sall1a	100	68.338	Hippocampus_comes
ENSPSIG00000008582	SALL1	99	50.186	ENSIPUG00000022928	sall1b	99	50.186	Ictalurus_punctatus
ENSPSIG00000008582	SALL1	100	71.096	ENSIPUG00000016265	SALL1	100	70.946	Ictalurus_punctatus
ENSPSIG00000008582	SALL1	99	86.128	ENSSTOG00000020885	SALL1	100	86.062	Ictidomys_tridecemlineatus
ENSPSIG00000008582	SALL1	100	69.699	ENSKMAG00000016681	sall1a	100	69.421	Kryptolebias_marmoratus
ENSPSIG00000008582	SALL1	97	68.291	ENSLBEG00000012207	sall1a	95	68.340	Labrus_bergylta
ENSPSIG00000008582	SALL1	100	82.506	ENSLACG00000003556	SALL1	100	82.506	Latimeria_chalumnae
ENSPSIG00000008582	SALL1	97	39.801	ENSLACG00000014018	-	99	39.801	Latimeria_chalumnae
ENSPSIG00000008582	SALL1	100	76.123	ENSLOCG00000007283	sall1b	100	75.749	Lepisosteus_oculatus
ENSPSIG00000008582	SALL1	98	85.936	ENSLAFG00000015251	SALL1	100	86.102	Loxodonta_africana
ENSPSIG00000008582	SALL1	99	86.157	ENSMFAG00000003298	SALL1	100	86.319	Macaca_fascicularis
ENSPSIG00000008582	SALL1	93	86.531	ENSMMUG00000017200	SALL1	100	86.705	Macaca_mulatta
ENSPSIG00000008582	SALL1	93	86.378	ENSMNEG00000034770	SALL1	100	86.553	Macaca_nemestrina
ENSPSIG00000008582	SALL1	99	86.409	ENSMLEG00000036406	SALL1	100	86.978	Mandrillus_leucophaeus
ENSPSIG00000008582	SALL1	99	70.270	ENSMAMG00000004164	sall1a	99	70.068	Mastacembelus_armatus
ENSPSIG00000008582	SALL1	100	69.277	ENSMZEG00005006479	sall1a	100	69.300	Maylandia_zebra
ENSPSIG00000008582	SALL1	98	93.692	ENSMGAG00000004704	SALL1	100	93.692	Meleagris_gallopavo
ENSPSIG00000008582	SALL1	99	84.006	ENSMAUG00000019093	Sall1	100	83.714	Mesocricetus_auratus
ENSPSIG00000008582	SALL1	100	85.019	ENSMICG00000036486	SALL1	100	84.943	Microcebus_murinus
ENSPSIG00000008582	SALL1	99	69.277	ENSMMOG00000016400	sall1a	99	69.398	Mola_mola
ENSPSIG00000008582	SALL1	99	89.534	ENSMODG00000013114	SALL1	99	89.687	Monodelphis_domestica
ENSPSIG00000008582	SALL1	99	69.977	ENSMALG00000013400	sall1a	99	69.925	Monopterus_albus
ENSPSIG00000008582	SALL1	99	83.069	MGP_CAROLIEiJ_G0031362	Sall1	100	82.691	Mus_caroli
ENSPSIG00000008582	SALL1	99	82.993	ENSMUSG00000031665	Sall1	100	82.704	Mus_musculus
ENSPSIG00000008582	SALL1	99	82.691	MGP_PahariEiJ_G0022961	Sall1	100	82.326	Mus_pahari
ENSPSIG00000008582	SALL1	99	82.993	MGP_SPRETEiJ_G0032480	Sall1	100	82.704	Mus_spretus
ENSPSIG00000008582	SALL1	98	84.068	ENSMPUG00000003265	SALL1	96	83.991	Mustela_putorius_furo
ENSPSIG00000008582	SALL1	98	78.599	ENSMLUG00000015541	SALL1	100	79.677	Myotis_lucifugus
ENSPSIG00000008582	SALL1	100	69.277	ENSNBRG00000009307	sall1a	100	69.300	Neolamprologus_brichardi
ENSPSIG00000008582	SALL1	94	93.855	ENSNLEG00000001008	SALL1	100	93.333	Nomascus_leucogenys
ENSPSIG00000008582	SALL1	99	89.687	ENSMEUG00000012206	SALL1	99	89.610	Notamacropus_eugenii
ENSPSIG00000008582	SALL1	81	87.822	ENSOPRG00000005645	SALL1	74	87.697	Ochotona_princeps
ENSPSIG00000008582	SALL1	99	87.195	ENSODEG00000003685	SALL1	100	87.129	Octodon_degus
ENSPSIG00000008582	SALL1	100	69.277	ENSONIG00000002831	sall1a	100	69.300	Oreochromis_niloticus
ENSPSIG00000008582	SALL1	90	86.813	ENSOANG00000013399	SALL1	97	89.811	Ornithorhynchus_anatinus
ENSPSIG00000008582	SALL1	100	69.248	ENSORLG00000013827	sall1a	100	69.271	Oryzias_latipes
ENSPSIG00000008582	SALL1	100	69.173	ENSORLG00020020570	sall1a	100	69.196	Oryzias_latipes_hni
ENSPSIG00000008582	SALL1	100	69.248	ENSORLG00015018830	sall1a	100	69.271	Oryzias_latipes_hsok
ENSPSIG00000008582	SALL1	100	69.023	ENSOMEG00000016043	sall1a	100	69.150	Oryzias_melastigma
ENSPSIG00000008582	SALL1	99	85.421	ENSOGAG00000027316	SALL1	100	85.281	Otolemur_garnettii
ENSPSIG00000008582	SALL1	100	79.561	ENSOARG00000017583	SALL1	100	79.803	Ovis_aries
ENSPSIG00000008582	SALL1	98	64.961	ENSPPAG00000035136	-	99	65.659	Pan_paniscus
ENSPSIG00000008582	SALL1	98	86.353	ENSPPAG00000035657	SALL1	100	86.441	Pan_paniscus
ENSPSIG00000008582	SALL1	100	83.675	ENSPPRG00000023283	SALL1	100	84.344	Panthera_pardus
ENSPSIG00000008582	SALL1	88	71.982	ENSPTIG00000013539	-	95	72.159	Panthera_tigris_altaica
ENSPSIG00000008582	SALL1	98	64.551	ENSPTRG00000045256	-	99	65.248	Pan_troglodytes
ENSPSIG00000008582	SALL1	99	86.136	ENSPTRG00000008108	SALL1	100	86.374	Pan_troglodytes
ENSPSIG00000008582	SALL1	99	86.333	ENSPANG00000024176	SALL1	100	86.495	Papio_anubis
ENSPSIG00000008582	SALL1	100	66.894	ENSPKIG00000005383	-	100	67.046	Paramormyrops_kingsleyae
ENSPSIG00000008582	SALL1	100	66.642	ENSPKIG00000022251	sall1a	100	66.491	Paramormyrops_kingsleyae
ENSPSIG00000008582	SALL1	99	66.567	ENSPMGG00000021788	sall1a	99	66.940	Periophthalmus_magnuspinnatus
ENSPSIG00000008582	SALL1	99	50.806	ENSPMAG00000008148	sall1b	99	50.957	Petromyzon_marinus
ENSPSIG00000008582	SALL1	99	89.381	ENSPCIG00000017840	SALL1	99	89.381	Phascolarctos_cinereus
ENSPSIG00000008582	SALL1	98	69.307	ENSPFOG00000015799	sall1a	96	69.178	Poecilia_formosa
ENSPSIG00000008582	SALL1	100	69.455	ENSPLAG00000022539	sall1a	100	69.328	Poecilia_latipinna
ENSPSIG00000008582	SALL1	100	69.679	ENSPMEG00000020894	sall1a	100	69.552	Poecilia_mexicana
ENSPSIG00000008582	SALL1	100	69.895	ENSPREG00000006802	sall1a	100	69.767	Poecilia_reticulata
ENSPSIG00000008582	SALL1	90	85.302	ENSPPYG00000007345	SALL1	96	85.472	Pongo_abelii
ENSPSIG00000008582	SALL1	85	86.420	ENSPCAG00000008162	SALL1	93	86.449	Procavia_capensis
ENSPSIG00000008582	SALL1	100	85.551	ENSPCOG00000028192	SALL1	100	86.084	Propithecus_coquereli
ENSPSIG00000008582	SALL1	67	84.813	ENSPVAG00000015374	SALL1	100	85.164	Pteropus_vampyrus
ENSPSIG00000008582	SALL1	100	69.352	ENSPNYG00000010865	sall1a	100	69.375	Pundamilia_nyererei
ENSPSIG00000008582	SALL1	71	63.462	ENSPNAG00000028248	-	70	63.462	Pygocentrus_nattereri
ENSPSIG00000008582	SALL1	100	68.666	ENSPNAG00000023644	sall1a	100	68.567	Pygocentrus_nattereri
ENSPSIG00000008582	SALL1	99	53.323	ENSPNAG00000007442	sall1b	99	53.323	Pygocentrus_nattereri
ENSPSIG00000008582	SALL1	100	83.131	ENSRNOG00000013907	Sall1	100	83.207	Rattus_norvegicus
ENSPSIG00000008582	SALL1	93	86.509	ENSRBIG00000015707	SALL1	100	86.846	Rhinopithecus_bieti
ENSPSIG00000008582	SALL1	98	86.321	ENSRROG00000035777	SALL1	100	86.694	Rhinopithecus_roxellana
ENSPSIG00000008582	SALL1	99	85.779	ENSSBOG00000032186	SALL1	100	85.790	Saimiri_boliviensis_boliviensis
ENSPSIG00000008582	SALL1	99	88.991	ENSSHAG00000009477	SALL1	99	88.761	Sarcophilus_harrisii
ENSPSIG00000008582	SALL1	98	68.328	ENSSFOG00015001590	sall1a	99	68.328	Scleropages_formosus
ENSPSIG00000008582	SALL1	100	67.372	ENSSFOG00015020020	sall1a	100	67.447	Scleropages_formosus
ENSPSIG00000008582	SALL1	99	70.053	ENSSMAG00000009160	sall1a	99	70.000	Scophthalmus_maximus
ENSPSIG00000008582	SALL1	99	70.429	ENSSDUG00000006507	sall1a	99	70.226	Seriola_dumerili
ENSPSIG00000008582	SALL1	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSPSIG00000008582	SALL1	99	70.504	ENSSLDG00000017721	sall1a	99	70.301	Seriola_lalandi_dorsalis
ENSPSIG00000008582	SALL1	98	85.004	ENSSARG00000000661	SALL1	100	84.938	Sorex_araneus
ENSPSIG00000008582	SALL1	100	93.354	ENSSPUG00000000156	SALL1	100	93.354	Sphenodon_punctatus
ENSPSIG00000008582	SALL1	100	70.721	ENSSPAG00000021615	sall1a	100	70.518	Stegastes_partitus
ENSPSIG00000008582	SALL1	99	83.396	ENSSSCG00000002836	SALL1	100	84.012	Sus_scrofa
ENSPSIG00000008582	SALL1	100	93.736	ENSTGUG00000007514	SALL1	100	93.736	Taeniopygia_guttata
ENSPSIG00000008582	SALL1	91	67.379	ENSTRUG00000008950	sall1a	100	67.737	Takifugu_rubripes
ENSPSIG00000008582	SALL1	92	66.092	ENSTNIG00000004257	sall1a	100	66.858	Tetraodon_nigroviridis
ENSPSIG00000008582	SALL1	72	91.096	ENSTBEG00000002119	-	53	91.096	Tupaia_belangeri
ENSPSIG00000008582	SALL1	90	83.901	ENSUAMG00000023379	-	92	83.986	Ursus_americanus
ENSPSIG00000008582	SALL1	90	82.995	ENSVVUG00000019383	-	99	83.672	Vulpes_vulpes
ENSPSIG00000008582	SALL1	96	34.859	ENSXETG00000017176	sall2	70	39.213	Xenopus_tropicalis
ENSPSIG00000008582	SALL1	100	79.195	ENSXETG00000018417	sall1	100	79.195	Xenopus_tropicalis
ENSPSIG00000008582	SALL1	100	69.820	ENSXMAG00000016273	sall1a	100	69.692	Xiphophorus_maculatus