EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000008586 (Gene tree)
Gene ID: -
Gene Symbol: SRL
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 26680 bases
Position: chrJH210909.1:881278-907957
Accession: 102448745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000009470	MMR_HSR1	PF01926.23	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000009517	SRL-201	2685	XM_006130611	ENSPSIP00000009470	894 (aa)	XP_006130673	K7FN60

Gene Model

Click here to download ENSPSIG00000008586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008586	SRL	50	90.929	ENSG00000185739	SRL	99	92.308	Homo_sapiens
ENSPSIG00000008586	SRL	50	83.070	ENSAPOG00000018093	srl	99	83.220	Acanthochromis_polyacanthus
ENSPSIG00000008586	SRL	88	90.929	ENSAMEG00000010862	SRL	61	90.929	Ailuropoda_melanoleuca
ENSPSIG00000008586	SRL	50	83.296	ENSACIG00000015799	srl	98	83.296	Amphilophus_citrinellus
ENSPSIG00000008586	SRL	50	83.296	ENSAPEG00000006911	srl	94	83.296	Amphiprion_percula
ENSPSIG00000008586	SRL	55	67.456	ENSATEG00000009643	SRL	56	67.850	Anabas_testudineus
ENSPSIG00000008586	SRL	50	83.973	ENSATEG00000024315	srl	99	80.728	Anabas_testudineus
ENSPSIG00000008586	SRL	73	56.186	ENSACLG00000024674	SRL	85	56.484	Astatotilapia_calliptera
ENSPSIG00000008586	SRL	50	82.844	ENSACLG00000027685	srl	97	82.844	Astatotilapia_calliptera
ENSPSIG00000008586	SRL	51	81.978	ENSAMXG00000018789	srl	89	81.978	Astyanax_mexicanus
ENSPSIG00000008586	SRL	51	90.529	ENSBTAG00000001078	SRL	97	71.649	Bos_taurus
ENSPSIG00000008586	SRL	51	89.760	ENSCAFG00000019233	SRL	85	89.760	Canis_familiaris
ENSPSIG00000008586	SRL	57	90.529	ENSCAFG00020025024	SRL	86	74.959	Canis_lupus_dingo
ENSPSIG00000008586	SRL	52	88.865	ENSCHIG00000017927	SRL	98	59.798	Capra_hircus
ENSPSIG00000008586	SRL	50	91.372	ENSTSYG00000007919	SRL	99	92.541	Carlito_syrichta
ENSPSIG00000008586	SRL	51	90.749	ENSCPOG00000012643	SRL	96	90.749	Cavia_porcellus
ENSPSIG00000008586	SRL	99	57.825	ENSCATG00000032227	-	96	90.929	Cercocebus_atys
ENSPSIG00000008586	SRL	51	90.969	ENSCLAG00000016242	SRL	96	90.969	Chinchilla_lanigera
ENSPSIG00000008586	SRL	99	58.154	ENSCSAG00000009635	-	98	58.522	Chlorocebus_sabaeus
ENSPSIG00000008586	SRL	69	92.487	ENSCHOG00000001618	SRL	85	92.487	Choloepus_hoffmanni
ENSPSIG00000008586	SRL	99	95.489	ENSCPBG00000026371	SRL	96	94.828	Chrysemys_picta_bellii
ENSPSIG00000008586	SRL	50	90.929	ENSCANG00000035872	SRL	99	92.308	Colobus_angolensis_palliatus
ENSPSIG00000008586	SRL	99	59.206	ENSCGRG00001016630	Srl	96	90.529	Cricetulus_griseus_chok1gshd
ENSPSIG00000008586	SRL	99	59.206	ENSCGRG00000005458	Srl	96	90.529	Cricetulus_griseus_crigri
ENSPSIG00000008586	SRL	51	69.330	ENSCSEG00000011866	SRL	93	69.330	Cynoglossus_semilaevis
ENSPSIG00000008586	SRL	50	83.521	ENSCSEG00000016151	srl	95	83.521	Cynoglossus_semilaevis
ENSPSIG00000008586	SRL	53	80.042	ENSCVAG00000003513	srl	98	81.878	Cyprinodon_variegatus
ENSPSIG00000008586	SRL	51	83.297	ENSDARG00000104587	srl	97	83.297	Danio_rerio
ENSPSIG00000008586	SRL	82	91.480	ENSDNOG00000011643	SRL	68	75.084	Dasypus_novemcinctus
ENSPSIG00000008586	SRL	51	90.287	ENSDORG00000014807	Srl	96	90.287	Dipodomys_ordii
ENSPSIG00000008586	SRL	80	91.256	ENSEASG00005000942	SRL	80	71.001	Equus_asinus_asinus
ENSPSIG00000008586	SRL	51	90.728	ENSECAG00000024219	SRL	96	90.728	Equus_caballus
ENSPSIG00000008586	SRL	52	78.008	ENSELUG00000015616	srl	99	78.008	Esox_lucius
ENSPSIG00000008586	SRL	80	92.045	ENSFCAG00000022075	SRL	96	90.929	Felis_catus
ENSPSIG00000008586	SRL	51	91.429	ENSFALG00000004328	SRL	87	73.858	Ficedula_albicollis
ENSPSIG00000008586	SRL	51	90.949	ENSFDAG00000006199	SRL	96	90.949	Fukomys_damarensis
ENSPSIG00000008586	SRL	50	81.236	ENSFHEG00000011239	srl	95	82.727	Fundulus_heteroclitus
ENSPSIG00000008586	SRL	51	93.142	ENSGALG00000038884	SRL	96	93.142	Gallus_gallus
ENSPSIG00000008586	SRL	50	83.333	ENSGAFG00000000010	srl	96	83.333	Gambusia_affinis
ENSPSIG00000008586	SRL	50	80.220	ENSGACG00000011332	srl	100	80.220	Gasterosteus_aculeatus
ENSPSIG00000008586	SRL	96	73.251	ENSGAGG00000015590	SRL	87	71.844	Gopherus_agassizii
ENSPSIG00000008586	SRL	99	59.295	ENSGGOG00000011312	-	96	90.929	Gorilla_gorilla
ENSPSIG00000008586	SRL	50	82.844	ENSHBUG00000007581	srl	97	82.844	Haplochromis_burtoni
ENSPSIG00000008586	SRL	50	71.930	ENSHBUG00000015710	SRL	85	55.988	Haplochromis_burtoni
ENSPSIG00000008586	SRL	51	91.189	ENSHGLG00000015271	SRL	96	91.189	Heterocephalus_glaber_female
ENSPSIG00000008586	SRL	51	91.189	ENSHGLG00100019378	SRL	96	91.189	Heterocephalus_glaber_male
ENSPSIG00000008586	SRL	50	83.070	ENSHCOG00000008687	srl	98	83.070	Hippocampus_comes
ENSPSIG00000008586	SRL	50	81.920	ENSIPUG00000012513	srl	96	81.920	Ictalurus_punctatus
ENSPSIG00000008586	SRL	99	58.830	ENSSTOG00000021151	-	96	90.529	Ictidomys_tridecemlineatus
ENSPSIG00000008586	SRL	51	90.529	ENSJJAG00000016400	Srl	96	90.529	Jaculus_jaculus
ENSPSIG00000008586	SRL	50	73.420	ENSKMAG00000019537	SRL	99	76.364	Kryptolebias_marmoratus
ENSPSIG00000008586	SRL	50	81.982	ENSKMAG00000014115	srl	98	81.982	Kryptolebias_marmoratus
ENSPSIG00000008586	SRL	50	82.222	ENSLBEG00000026643	srl	96	82.222	Labrus_bergylta
ENSPSIG00000008586	SRL	50	86.918	ENSLACG00000002825	SRL	99	86.918	Latimeria_chalumnae
ENSPSIG00000008586	SRL	50	85.144	ENSLOCG00000002644	srl	96	85.144	Lepisosteus_oculatus
ENSPSIG00000008586	SRL	99	59.513	ENSLAFG00000006329	SRL	63	79.204	Loxodonta_africana
ENSPSIG00000008586	SRL	99	56.158	ENSMNEG00000019236	-	98	89.032	Macaca_nemestrina
ENSPSIG00000008586	SRL	50	82.965	ENSMLEG00000032156	SRL	95	82.965	Mandrillus_leucophaeus
ENSPSIG00000008586	SRL	50	84.199	ENSMAMG00000023322	srl	94	84.199	Mastacembelus_armatus
ENSPSIG00000008586	SRL	50	72.149	ENSMZEG00005004010	SRL	86	56.322	Maylandia_zebra
ENSPSIG00000008586	SRL	50	82.844	ENSMZEG00005004548	srl	97	82.844	Maylandia_zebra
ENSPSIG00000008586	SRL	51	92.140	ENSMGAG00000009342	SRL	96	93.717	Meleagris_gallopavo
ENSPSIG00000008586	SRL	58	89.588	ENSMICG00000032307	SRL	96	90.929	Microcebus_murinus
ENSPSIG00000008586	SRL	51	89.868	ENSMOCG00000008208	Srl	96	89.868	Microtus_ochrogaster
ENSPSIG00000008586	SRL	51	90.308	MGP_CAROLIEiJ_G0020400	Srl	96	90.308	Mus_caroli
ENSPSIG00000008586	SRL	51	90.308	ENSMUSG00000022519	Srl	96	90.308	Mus_musculus
ENSPSIG00000008586	SRL	51	90.308	MGP_SPRETEiJ_G0021294	Srl	96	90.308	Mus_spretus
ENSPSIG00000008586	SRL	99	76.351	ENSMPUG00000015025	SRL	68	76.102	Mustela_putorius_furo
ENSPSIG00000008586	SRL	99	77.234	ENSMLUG00000030733	SRL	99	77.234	Myotis_lucifugus
ENSPSIG00000008586	SRL	51	90.308	ENSNGAG00000019741	Srl	96	90.308	Nannospalax_galili
ENSPSIG00000008586	SRL	51	81.938	ENSNBRG00000023775	srl	96	81.938	Neolamprologus_brichardi
ENSPSIG00000008586	SRL	66	58.862	ENSNBRG00000002422	SRL	85	57.315	Neolamprologus_brichardi
ENSPSIG00000008586	SRL	50	84.719	ENSNLEG00000029051	SRL	94	84.719	Nomascus_leucogenys
ENSPSIG00000008586	SRL	65	83.991	ENSOPRG00000000477	-	98	55.388	Ochotona_princeps
ENSPSIG00000008586	SRL	51	90.308	ENSODEG00000013256	SRL	96	90.308	Octodon_degus
ENSPSIG00000008586	SRL	51	81.004	ENSONIG00000005192	srl	97	80.828	Oreochromis_niloticus
ENSPSIG00000008586	SRL	53	85.714	ENSOCUG00000025140	SRL	98	59.872	Oryctolagus_cuniculus
ENSPSIG00000008586	SRL	50	74.266	ENSORLG00000015064	SRL	97	74.266	Oryzias_latipes
ENSPSIG00000008586	SRL	50	81.596	ENSORLG00000008291	srl	91	85.492	Oryzias_latipes
ENSPSIG00000008586	SRL	50	74.492	ENSORLG00020018173	SRL	97	74.492	Oryzias_latipes_hni
ENSPSIG00000008586	SRL	50	81.375	ENSORLG00020019784	srl	79	85.233	Oryzias_latipes_hni
ENSPSIG00000008586	SRL	50	74.492	ENSORLG00015019063	SRL	97	74.492	Oryzias_latipes_hsok
ENSPSIG00000008586	SRL	50	80.931	ENSORLG00015009342	srl	92	80.931	Oryzias_latipes_hsok
ENSPSIG00000008586	SRL	50	72.368	ENSOMEG00000005682	SRL	72	59.746	Oryzias_melastigma
ENSPSIG00000008586	SRL	50	81.153	ENSOMEG00000010006	srl	97	82.460	Oryzias_melastigma
ENSPSIG00000008586	SRL	60	90.022	ENSOGAG00000029266	SRL	99	58.850	Otolemur_garnettii
ENSPSIG00000008586	SRL	59	88.793	ENSOARG00000003074	SRL	58	88.793	Ovis_aries
ENSPSIG00000008586	SRL	99	59.362	ENSPPAG00000024919	-	99	92.308	Pan_paniscus
ENSPSIG00000008586	SRL	99	59.468	ENSPTRG00000007712	SRL	99	92.308	Pan_troglodytes
ENSPSIG00000008586	SRL	52	89.417	ENSPANG00000013804	SRL	99	89.417	Papio_anubis
ENSPSIG00000008586	SRL	52	81.197	ENSPKIG00000006405	srl	99	81.197	Paramormyrops_kingsleyae
ENSPSIG00000008586	SRL	50	82.667	ENSPMGG00000021081	srl	97	82.667	Periophthalmus_magnuspinnatus
ENSPSIG00000008586	SRL	51	90.088	ENSPEMG00000015842	Srl	96	90.088	Peromyscus_maniculatus_bairdii
ENSPSIG00000008586	SRL	51	90.708	ENSPCIG00000012128	SRL	99	90.708	Phascolarctos_cinereus
ENSPSIG00000008586	SRL	50	81.140	ENSPFOG00000011408	srl	94	81.140	Poecilia_formosa
ENSPSIG00000008586	SRL	50	83.108	ENSPLAG00000008017	srl	96	83.108	Poecilia_latipinna
ENSPSIG00000008586	SRL	50	83.108	ENSPMEG00000006745	srl	96	83.108	Poecilia_mexicana
ENSPSIG00000008586	SRL	50	82.883	ENSPREG00000007751	srl	98	82.883	Poecilia_reticulata
ENSPSIG00000008586	SRL	61	89.610	ENSPCAG00000003378	-	52	89.610	Procavia_capensis
ENSPSIG00000008586	SRL	50	91.593	ENSPCOG00000023135	SRL	99	92.774	Propithecus_coquereli
ENSPSIG00000008586	SRL	72	81.250	ENSPVAG00000006586	SRL	72	80.987	Pteropus_vampyrus
ENSPSIG00000008586	SRL	77	55.021	ENSPNYG00000003423	SRL	85	56.178	Pundamilia_nyererei
ENSPSIG00000008586	SRL	51	80.879	ENSPNAG00000023106	srl	97	80.879	Pygocentrus_nattereri
ENSPSIG00000008586	SRL	51	90.022	ENSRNOG00000005269	Srl	98	58.550	Rattus_norvegicus
ENSPSIG00000008586	SRL	99	60.065	ENSRBIG00000042358	SRL	98	59.632	Rhinopithecus_bieti
ENSPSIG00000008586	SRL	51	90.708	ENSSHAG00000011715	-	100	57.068	Sarcophilus_harrisii
ENSPSIG00000008586	SRL	50	82.167	ENSSMAG00000016274	srl	97	82.167	Scophthalmus_maximus
ENSPSIG00000008586	SRL	50	82.844	ENSSDUG00000010808	srl	98	82.844	Seriola_dumerili
ENSPSIG00000008586	SRL	50	82.844	ENSSLDG00000022024	srl	96	82.844	Seriola_lalandi_dorsalis
ENSPSIG00000008586	SRL	50	93.805	ENSSPUG00000016859	SRL	99	93.805	Sphenodon_punctatus
ENSPSIG00000008586	SRL	99	71.277	ENSSSCG00000007949	SRL	99	90.583	Sus_scrofa
ENSPSIG00000008586	SRL	51	92.257	ENSTGUG00000003951	-	99	92.257	Taeniopygia_guttata
ENSPSIG00000008586	SRL	61	91.705	ENSTTRG00000002709	-	59	91.705	Tursiops_truncatus
ENSPSIG00000008586	SRL	67	77.217	ENSUAMG00000005701	SRL	98	59.417	Ursus_americanus
ENSPSIG00000008586	SRL	67	77.217	ENSUMAG00000002574	SRL	98	59.529	Ursus_maritimus
ENSPSIG00000008586	SRL	58	90.728	ENSVVUG00000016331	-	64	74.627	Vulpes_vulpes
ENSPSIG00000008586	SRL	50	89.556	ENSXETG00000017313	srl	99	89.556	Xenopus_tropicalis
ENSPSIG00000008586	SRL	50	82.561	ENSXMAG00000004625	srl	92	82.561	Xiphophorus_maculatus