EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000008610 (Gene tree)
Gene ID: 102462452
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha%2C oocyte form
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 5038 bases
Position: chrJH210894.1:1169420-1174457
Accession: 102462452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000009480	GTP_EFTU	PF00009.27	1.5e-53	1	1
ENSPSIP00000009480	GTP_EFTU_D2	PF03144.25	5.4e-13	1	1
ENSPSIP00000009480	GTP_EFTU_D3	PF03143.17	1.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000009527	-	1386	XM_006130495	ENSPSIP00000009480	461 (aa)	XP_006130557	K7FN70

Gene Model

Click here to download ENSPSIG00000008610's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008610's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000008610	-	95	38.235	ENSPSIG00000008275	GSPT1	82	38.235
ENSPSIG00000008610	-	99	88.696	ENSPSIG00000011654	EEF1A2	99	88.696
ENSPSIG00000008610	-	96	86.261	ENSPSIG00000004417	-	100	86.261
ENSPSIG00000008610	-	76	42.210	ENSPSIG00000016467	HBS1L	55	42.210
ENSPSIG00000008610	-	60	61.566	ENSPSIG00000008080	-	98	61.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008610	-	67	84.365	ENSAPOG00000004757	eef1a1l1	99	98.438	Acanthochromis_polyacanthus
ENSPSIG00000008610	-	100	79.393	ENSAMEG00000004317	-	100	79.393	Ailuropoda_melanoleuca
ENSPSIG00000008610	-	100	86.117	ENSAMEG00000009677	-	100	86.117	Ailuropoda_melanoleuca
ENSPSIG00000008610	-	100	86.768	ENSCAFG00000013249	-	100	86.768	Canis_familiaris
ENSPSIG00000008610	-	100	86.768	ENSCAFG00020020007	-	100	86.768	Canis_lupus_dingo
ENSPSIG00000008610	-	100	97.614	ENSCPBG00000000646	-	100	97.614	Chrysemys_picta_bellii
ENSPSIG00000008610	-	100	95.011	ENSCPBG00000000748	-	100	95.011	Chrysemys_picta_bellii
ENSPSIG00000008610	-	99	89.130	ENSDARG00000020850	eef1a1l1	99	89.130	Danio_rerio
ENSPSIG00000008610	-	98	89.207	ENSEASG00005012365	-	96	90.047	Equus_asinus_asinus
ENSPSIG00000008610	-	85	84.772	ENSEASG00005018013	-	99	84.772	Equus_asinus_asinus
ENSPSIG00000008610	-	100	87.419	ENSECAG00000022260	-	100	87.419	Equus_caballus
ENSPSIG00000008610	-	100	88.937	ENSELUG00000023536	eef1a1l1	100	88.937	Esox_lucius
ENSPSIG00000008610	-	100	89.371	ENSFCAG00000030530	-	100	89.371	Felis_catus
ENSPSIG00000008610	-	100	99.132	ENSGAGG00000000648	-	100	99.132	Gopherus_agassizii
ENSPSIG00000008610	-	100	95.011	ENSGAGG00000000642	-	100	95.011	Gopherus_agassizii
ENSPSIG00000008610	-	90	85.956	ENSLBEG00000002790	eef1a1l1	99	85.956	Labrus_bergylta
ENSPSIG00000008610	-	100	88.937	ENSLAFG00000028081	-	99	88.937	Loxodonta_africana
ENSPSIG00000008610	-	100	88.937	ENSLAFG00000025161	-	100	88.937	Loxodonta_africana
ENSPSIG00000008610	-	75	93.064	ENSOANG00000012066	-	100	93.064	Ornithorhynchus_anatinus
ENSPSIG00000008610	-	90	87.651	ENSOMEG00000006888	-	99	87.651	Oryzias_melastigma
ENSPSIG00000008610	-	100	89.588	ENSOARG00000002943	-	100	89.588	Ovis_aries
ENSPSIG00000008610	-	100	85.900	ENSPPRG00000008525	-	100	85.900	Panthera_pardus
ENSPSIG00000008610	-	97	89.485	ENSPPRG00000005678	-	96	89.485	Panthera_pardus
ENSPSIG00000008610	-	100	88.069	ENSPTIG00000006939	-	100	88.069	Panthera_tigris_altaica
ENSPSIG00000008610	-	66	97.222	ENSPVAG00000007682	-	65	97.222	Pteropus_vampyrus
ENSPSIG00000008610	-	100	80.911	ENSSMAG00000018455	-	99	80.911	Scophthalmus_maximus
ENSPSIG00000008610	-	100	96.529	ENSSPUG00000003655	-	100	96.529	Sphenodon_punctatus
ENSPSIG00000008610	-	100	90.456	ENSSSCG00000034113	-	100	90.456	Sus_scrofa
ENSPSIG00000008610	-	98	83.628	ENSSSCG00000038035	-	100	83.297	Sus_scrofa
ENSPSIG00000008610	-	100	77.007	ENSUAMG00000007676	-	100	77.007	Ursus_americanus
ENSPSIG00000008610	-	51	80.851	ENSUAMG00000006085	-	98	80.851	Ursus_americanus
ENSPSIG00000008610	-	100	84.382	ENSUAMG00000008928	-	100	84.382	Ursus_americanus
ENSPSIG00000008610	-	100	86.117	ENSUMAG00000013211	-	100	86.117	Ursus_maritimus
ENSPSIG00000008610	-	100	86.551	ENSVVUG00000026886	-	100	86.551	Vulpes_vulpes
ENSPSIG00000008610	-	100	89.805	ENSXETG00000022604	eef1a1o	100	89.805	Xenopus_tropicalis