EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000008618 (Gene tree)
Gene ID: 102448466
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 478347 bases
Position: chrJH224660.1:3326757-3805103
Accession: 102448466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000009465	RRM_1	PF00076.22	1.7e-34	1	2
ENSPSIP00000009465	RRM_1	PF00076.22	1.7e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000009512	MSI2-201	1539	XM_006138598	ENSPSIP00000009465	405 (aa)	XP_006138664	K7FN55

Gene Model

Click here to download ENSPSIG00000008618's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000008618	MSI2	97	59.645	ENSPSIG00000011608	-	92	79.487
ENSPSIG00000008618	MSI2	82	48.897	ENSPSIG00000009621	-	100	51.825
ENSPSIG00000008618	MSI2	54	39.474	ENSPSIG00000011649	RBM38	58	39.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008618	MSI2	83	98.106	ENSG00000153944	MSI2	100	98.106	Homo_sapiens
ENSPSIG00000008618	MSI2	100	81.176	ENSAPOG00000001658	msi2a	100	95.062	Acanthochromis_polyacanthus
ENSPSIG00000008618	MSI2	82	97.571	ENSAMEG00000002697	MSI2	99	76.042	Ailuropoda_melanoleuca
ENSPSIG00000008618	MSI2	100	82.512	ENSACIG00000009475	msi2a	100	82.512	Amphilophus_citrinellus
ENSPSIG00000008618	MSI2	78	94.821	ENSAPEG00000007706	msi2a	100	89.394	Amphiprion_percula
ENSPSIG00000008618	MSI2	76	95.327	ENSATEG00000003301	-	100	95.327	Anabas_testudineus
ENSPSIG00000008618	MSI2	100	81.176	ENSATEG00000010498	msi2a	100	95.062	Anabas_testudineus
ENSPSIG00000008618	MSI2	95	96.034	ENSACAG00000005452	MSI2	88	96.034	Anolis_carolinensis
ENSPSIG00000008618	MSI2	83	98.106	ENSANAG00000037827	MSI2	100	98.106	Aotus_nancymaae
ENSPSIG00000008618	MSI2	100	80.941	ENSACLG00000007752	msi2a	100	94.650	Astatotilapia_calliptera
ENSPSIG00000008618	MSI2	100	88.670	ENSAMXG00000010474	msi2b	95	97.119	Astyanax_mexicanus
ENSPSIG00000008618	MSI2	100	87.961	ENSAMXG00000032796	msi2a	100	96.226	Astyanax_mexicanus
ENSPSIG00000008618	MSI2	78	99.177	ENSBTAG00000004406	MSI2	97	99.177	Bos_taurus
ENSPSIG00000008618	MSI2	58	60.643	WBGene00003423	msi-1	76	60.643	Caenorhabditis_elegans
ENSPSIG00000008618	MSI2	83	98.106	ENSCJAG00000013998	MSI2	100	98.106	Callithrix_jacchus
ENSPSIG00000008618	MSI2	81	98.795	ENSCAFG00020025620	MSI2	72	96.313	Canis_lupus_dingo
ENSPSIG00000008618	MSI2	83	96.591	ENSCHIG00000016580	MSI2	100	96.591	Capra_hircus
ENSPSIG00000008618	MSI2	76	96.970	ENSCPOG00000034042	MSI2	99	93.119	Cavia_porcellus
ENSPSIG00000008618	MSI2	83	98.106	ENSCCAG00000033927	MSI2	100	98.106	Cebus_capucinus
ENSPSIG00000008618	MSI2	83	96.970	ENSCATG00000040879	MSI2	100	96.970	Cercocebus_atys
ENSPSIG00000008618	MSI2	87	96.642	ENSCLAG00000014325	MSI2	87	91.071	Chinchilla_lanigera
ENSPSIG00000008618	MSI2	83	98.106	ENSCSAG00000005633	MSI2	100	98.106	Chlorocebus_sabaeus
ENSPSIG00000008618	MSI2	61	98.039	ENSCHOG00000008660	MSI2	83	98.039	Choloepus_hoffmanni
ENSPSIG00000008618	MSI2	95	100.000	ENSCPBG00000009942	MSI2	96	100.000	Chrysemys_picta_bellii
ENSPSIG00000008618	MSI2	51	72.000	ENSCING00000018579	-	61	67.857	Ciona_intestinalis
ENSPSIG00000008618	MSI2	53	66.667	ENSCSAVG00000010397	-	72	65.517	Ciona_savignyi
ENSPSIG00000008618	MSI2	82	97.561	ENSCANG00000036414	MSI2	91	98.206	Colobus_angolensis_palliatus
ENSPSIG00000008618	MSI2	83	97.727	ENSCGRG00001013330	Msi2	100	97.727	Cricetulus_griseus_chok1gshd
ENSPSIG00000008618	MSI2	81	97.619	ENSCGRG00000003141	Msi2	100	75.844	Cricetulus_griseus_crigri
ENSPSIG00000008618	MSI2	83	81.818	ENSCSEG00000003266	-	100	81.818	Cynoglossus_semilaevis
ENSPSIG00000008618	MSI2	65	78.261	ENSCSEG00000013557	msi2a	83	80.734	Cynoglossus_semilaevis
ENSPSIG00000008618	MSI2	100	86.207	ENSCVAG00000017075	msi2a	100	95.062	Cyprinodon_variegatus
ENSPSIG00000008618	MSI2	100	84.975	ENSDARG00000033901	msi2a	100	84.975	Danio_rerio
ENSPSIG00000008618	MSI2	100	83.099	ENSDARG00000032614	msi2b	100	99.010	Danio_rerio
ENSPSIG00000008618	MSI2	78	99.107	ENSDNOG00000014501	MSI2	100	99.107	Dasypus_novemcinctus
ENSPSIG00000008618	MSI2	71	96.970	ENSDORG00000005394	Msi2	79	92.958	Dipodomys_ordii
ENSPSIG00000008618	MSI2	55	66.667	FBgn0260943	Rbp6	88	67.123	Drosophila_melanogaster
ENSPSIG00000008618	MSI2	55	75.658	ENSETEG00000012450	-	64	75.658	Echinops_telfairi
ENSPSIG00000008618	MSI2	90	59.128	ENSEBUG00000006732	msi2a	87	59.128	Eptatretus_burgeri
ENSPSIG00000008618	MSI2	74	97.468	ENSEASG00005002965	MSI2	97	77.083	Equus_asinus_asinus
ENSPSIG00000008618	MSI2	84	96.642	ENSECAG00000011435	MSI2	87	97.590	Equus_caballus
ENSPSIG00000008618	MSI2	67	86.538	ENSEEUG00000007810	MSI2	100	83.663	Erinaceus_europaeus
ENSPSIG00000008618	MSI2	100	86.199	ENSELUG00000001361	msi2b	100	86.199	Esox_lucius
ENSPSIG00000008618	MSI2	97	86.041	ENSELUG00000011747	msi2a	100	91.667	Esox_lucius
ENSPSIG00000008618	MSI2	83	98.106	ENSFCAG00000041686	MSI2	100	98.106	Felis_catus
ENSPSIG00000008618	MSI2	82	97.571	ENSFDAG00000016118	MSI2	100	76.042	Fukomys_damarensis
ENSPSIG00000008618	MSI2	100	80.941	ENSFHEG00000000084	msi2a	96	95.395	Fundulus_heteroclitus
ENSPSIG00000008618	MSI2	87	96.642	ENSGALG00000005567	MSI2	100	76.543	Gallus_gallus
ENSPSIG00000008618	MSI2	78	81.132	ENSGAFG00000006974	msi2a	90	96.026	Gambusia_affinis
ENSPSIG00000008618	MSI2	100	96.069	ENSGAGG00000016542	MSI2	100	96.078	Gopherus_agassizii
ENSPSIG00000008618	MSI2	82	97.561	ENSGGOG00000013182	MSI2	91	98.206	Gorilla_gorilla
ENSPSIG00000008618	MSI2	100	80.941	ENSHBUG00000020800	msi2a	100	94.650	Haplochromis_burtoni
ENSPSIG00000008618	MSI2	87	98.795	ENSHGLG00000012444	MSI2	76	96.154	Heterocephalus_glaber_female
ENSPSIG00000008618	MSI2	80	71.053	ENSHGLG00100003744	MSI2	100	65.789	Heterocephalus_glaber_male
ENSPSIG00000008618	MSI2	97	67.933	ENSHCOG00000017241	-	98	67.143	Hippocampus_comes
ENSPSIG00000008618	MSI2	100	80.471	ENSHCOG00000000266	msi2a	91	94.318	Hippocampus_comes
ENSPSIG00000008618	MSI2	100	82.547	ENSIPUG00000021097	msi2a	100	95.885	Ictalurus_punctatus
ENSPSIG00000008618	MSI2	100	87.685	ENSIPUG00000003732	msi2b	92	96.970	Ictalurus_punctatus
ENSPSIG00000008618	MSI2	76	96.970	ENSSTOG00000007884	MSI2	99	93.119	Ictidomys_tridecemlineatus
ENSPSIG00000008618	MSI2	80	68.421	ENSJJAG00000006292	-	100	68.421	Jaculus_jaculus
ENSPSIG00000008618	MSI2	100	85.714	ENSKMAG00000009494	msi2a	96	94.318	Kryptolebias_marmoratus
ENSPSIG00000008618	MSI2	100	81.176	ENSLBEG00000007061	msi2a	100	89.394	Labrus_bergylta
ENSPSIG00000008618	MSI2	95	73.407	ENSLBEG00000026223	-	100	73.407	Labrus_bergylta
ENSPSIG00000008618	MSI2	100	90.148	ENSLOCG00000004675	msi2b	100	90.148	Lepisosteus_oculatus
ENSPSIG00000008618	MSI2	82	97.561	ENSMFAG00000003775	MSI2	91	98.206	Macaca_fascicularis
ENSPSIG00000008618	MSI2	82	97.561	ENSMMUG00000002069	MSI2	91	98.206	Macaca_mulatta
ENSPSIG00000008618	MSI2	83	98.106	ENSMNEG00000045275	MSI2	100	98.106	Macaca_nemestrina
ENSPSIG00000008618	MSI2	82	97.561	ENSMLEG00000033888	MSI2	91	98.206	Mandrillus_leucophaeus
ENSPSIG00000008618	MSI2	100	80.986	ENSMAMG00000010503	msi2a	100	95.062	Mastacembelus_armatus
ENSPSIG00000008618	MSI2	100	79.167	ENSMAMG00000002488	-	99	95.364	Mastacembelus_armatus
ENSPSIG00000008618	MSI2	100	80.941	ENSMZEG00005007676	msi2a	100	94.697	Maylandia_zebra
ENSPSIG00000008618	MSI2	87	96.269	ENSMAUG00000003862	Msi2	100	76.108	Mesocricetus_auratus
ENSPSIG00000008618	MSI2	83	98.106	ENSMICG00000013598	-	100	98.106	Microcebus_murinus
ENSPSIG00000008618	MSI2	77	89.552	ENSMICG00000032913	-	94	86.111	Microcebus_murinus
ENSPSIG00000008618	MSI2	87	96.269	ENSMOCG00000005820	Msi2	100	76.296	Microtus_ochrogaster
ENSPSIG00000008618	MSI2	75	88.845	ENSMMOG00000008348	msi2a	85	94.570	Mola_mola
ENSPSIG00000008618	MSI2	67	96.899	ENSMODG00000014790	MSI2	100	65.414	Monodelphis_domestica
ENSPSIG00000008618	MSI2	100	95.425	ENSMALG00000000071	msi2a	100	95.425	Monopterus_albus
ENSPSIG00000008618	MSI2	87	96.269	MGP_CAROLIEiJ_G0016948	Msi2	100	99.115	Mus_caroli
ENSPSIG00000008618	MSI2	87	96.269	ENSMUSG00000069769	Msi2	100	99.115	Mus_musculus
ENSPSIG00000008618	MSI2	87	96.269	MGP_PahariEiJ_G0018079	Msi2	100	99.115	Mus_pahari
ENSPSIG00000008618	MSI2	87	96.269	MGP_SPRETEiJ_G0017795	Msi2	100	99.115	Mus_spretus
ENSPSIG00000008618	MSI2	78	99.177	ENSMPUG00000015377	MSI2	97	99.177	Mustela_putorius_furo
ENSPSIG00000008618	MSI2	78	98.765	ENSMLUG00000007865	MSI2	97	98.765	Myotis_lucifugus
ENSPSIG00000008618	MSI2	87	96.269	ENSNGAG00000017807	Msi2	100	76.296	Nannospalax_galili
ENSPSIG00000008618	MSI2	100	86.207	ENSNBRG00000014596	msi2a	100	89.015	Neolamprologus_brichardi
ENSPSIG00000008618	MSI2	82	97.425	ENSNLEG00000008059	MSI2	95	98.086	Nomascus_leucogenys
ENSPSIG00000008618	MSI2	54	88.158	ENSOPRG00000000872	-	64	88.158	Ochotona_princeps
ENSPSIG00000008618	MSI2	87	96.642	ENSODEG00000011974	MSI2	100	76.543	Octodon_degus
ENSPSIG00000008618	MSI2	99	81.967	ENSOANG00000005667	MSI2	99	83.841	Ornithorhynchus_anatinus
ENSPSIG00000008618	MSI2	78	99.177	ENSOCUG00000010440	MSI2	97	99.177	Oryctolagus_cuniculus
ENSPSIG00000008618	MSI2	100	86.453	ENSORLG00000009671	msi2a	95	95.076	Oryzias_latipes
ENSPSIG00000008618	MSI2	100	81.176	ENSORLG00020021556	msi2a	100	95.062	Oryzias_latipes_hni
ENSPSIG00000008618	MSI2	100	86.453	ENSORLG00015004592	msi2a	95	95.076	Oryzias_latipes_hsok
ENSPSIG00000008618	MSI2	100	86.453	ENSOMEG00000000146	msi2a	100	95.062	Oryzias_melastigma
ENSPSIG00000008618	MSI2	76	96.970	ENSOGAG00000005621	MSI2	99	93.416	Otolemur_garnettii
ENSPSIG00000008618	MSI2	82	97.561	ENSPPAG00000037697	MSI2	91	98.206	Pan_paniscus
ENSPSIG00000008618	MSI2	78	99.177	ENSPPRG00000001848	MSI2	94	99.177	Panthera_pardus
ENSPSIG00000008618	MSI2	59	79.325	ENSPTIG00000021873	-	90	79.325	Panthera_tigris_altaica
ENSPSIG00000008618	MSI2	82	97.425	ENSPTIG00000021678	MSI2	83	98.086	Panthera_tigris_altaica
ENSPSIG00000008618	MSI2	82	97.561	ENSPTRG00000009437	MSI2	91	98.206	Pan_troglodytes
ENSPSIG00000008618	MSI2	83	98.106	ENSPANG00000022319	MSI2	100	98.106	Papio_anubis
ENSPSIG00000008618	MSI2	100	79.259	ENSPKIG00000007038	-	96	92.593	Paramormyrops_kingsleyae
ENSPSIG00000008618	MSI2	81	89.015	ENSPMGG00000005888	msi2a	100	89.015	Periophthalmus_magnuspinnatus
ENSPSIG00000008618	MSI2	97	85.714	ENSPCIG00000006063	MSI2	100	81.481	Phascolarctos_cinereus
ENSPSIG00000008618	MSI2	100	80.941	ENSPREG00000000881	msi2a	99	89.394	Poecilia_reticulata
ENSPSIG00000008618	MSI2	76	96.970	ENSPPYG00000008244	-	100	94.828	Pongo_abelii
ENSPSIG00000008618	MSI2	59	96.970	ENSPCAG00000010552	MSI2	100	92.958	Procavia_capensis
ENSPSIG00000008618	MSI2	65	99.451	ENSPVAG00000017053	MSI2	86	99.451	Pteropus_vampyrus
ENSPSIG00000008618	MSI2	100	80.941	ENSPNYG00000018393	msi2a	100	94.697	Pundamilia_nyererei
ENSPSIG00000008618	MSI2	100	88.206	ENSPNAG00000000844	msi2b	96	91.803	Pygocentrus_nattereri
ENSPSIG00000008618	MSI2	100	87.961	ENSPNAG00000014957	msi2a	100	96.226	Pygocentrus_nattereri
ENSPSIG00000008618	MSI2	78	99.065	ENSRNOG00000025338	Msi2	100	99.065	Rattus_norvegicus
ENSPSIG00000008618	MSI2	82	97.561	ENSSBOG00000026425	MSI2	91	98.206	Saimiri_boliviensis_boliviensis
ENSPSIG00000008618	MSI2	81	98.374	ENSSHAG00000008672	MSI2	100	75.979	Sarcophilus_harrisii
ENSPSIG00000008618	MSI2	100	72.059	ENSSFOG00015012168	msi2b	100	72.059	Scleropages_formosus
ENSPSIG00000008618	MSI2	84	85.556	ENSSFOG00015021687	-	97	92.793	Scleropages_formosus
ENSPSIG00000008618	MSI2	100	81.176	ENSSMAG00000018484	msi2a	100	95.062	Scophthalmus_maximus
ENSPSIG00000008618	MSI2	100	81.176	ENSSDUG00000014507	msi2a	100	95.062	Seriola_dumerili
ENSPSIG00000008618	MSI2	81	90.909	ENSSDUG00000021968	-	99	94.702	Seriola_dumerili
ENSPSIG00000008618	MSI2	100	81.176	ENSSLDG00000017172	msi2a	95	95.062	Seriola_lalandi_dorsalis
ENSPSIG00000008618	MSI2	100	81.176	ENSSPAG00000017793	msi2a	96	95.062	Stegastes_partitus
ENSPSIG00000008618	MSI2	83	98.106	ENSSSCG00000038505	MSI2	100	98.106	Sus_scrofa
ENSPSIG00000008618	MSI2	67	96.899	ENSTGUG00000008452	MSI2	100	66.541	Taeniopygia_guttata
ENSPSIG00000008618	MSI2	97	80.340	ENSTRUG00000021248	msi2a	100	88.192	Takifugu_rubripes
ENSPSIG00000008618	MSI2	60	80.992	ENSTBEG00000001241	MSI2	73	80.992	Tupaia_belangeri
ENSPSIG00000008618	MSI2	83	98.438	ENSTTRG00000002189	MSI2	100	98.438	Tursiops_truncatus
ENSPSIG00000008618	MSI2	83	98.462	ENSUAMG00000000700	MSI2	97	99.177	Ursus_americanus
ENSPSIG00000008618	MSI2	75	98.077	ENSUMAG00000000505	MSI2	95	98.964	Ursus_maritimus
ENSPSIG00000008618	MSI2	87	96.642	ENSVVUG00000011783	MSI2	100	97.468	Vulpes_vulpes
ENSPSIG00000008618	MSI2	100	84.483	ENSXCOG00000006113	msi2a	100	84.483	Xiphophorus_couchianus
ENSPSIG00000008618	MSI2	100	80.941	ENSXMAG00000000608	msi2a	100	95.062	Xiphophorus_maculatus