EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000008734 (Gene tree)
Gene ID: -
Gene Symbol: GFI1
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 12620 bases
Position: chrJH206257.1:2677000-2689619
Accession: 102444508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000009652	zf-C2H2	PF00096.26	1.7e-28	1	6
ENSPSIP00000009652	zf-C2H2	PF00096.26	1.7e-28	2	6
ENSPSIP00000009652	zf-C2H2	PF00096.26	1.7e-28	3	6
ENSPSIP00000009652	zf-C2H2	PF00096.26	1.7e-28	4	6
ENSPSIP00000009652	zf-C2H2	PF00096.26	1.7e-28	5	6
ENSPSIP00000009652	zf-C2H2	PF00096.26	1.7e-28	6	6
ENSPSIP00000009652	zf-met	PF12874.7	6.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000009699	GFI1-201	2293	XM_006114175	ENSPSIP00000009652	358 (aa)	XP_006114237	K7FNP2

Gene Model

Click here to download ENSPSIG00000008734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000008734	GFI1	58	48.819	ENSPSIG00000000672	-	84	48.819
ENSPSIG00000008734	GFI1	51	47.024	ENSPSIG00000013021	-	73	47.024
ENSPSIG00000008734	GFI1	57	44.512	ENSPSIG00000000333	-	87	44.512
ENSPSIG00000008734	GFI1	66	49.123	ENSPSIG00000000943	ZNF770	58	49.123
ENSPSIG00000008734	GFI1	53	45.033	ENSPSIG00000005603	-	68	45.033
ENSPSIG00000008734	GFI1	56	47.674	ENSPSIG00000015216	-	85	47.674
ENSPSIG00000008734	GFI1	53	47.015	ENSPSIG00000004614	-	91	47.015
ENSPSIG00000008734	GFI1	59	46.667	ENSPSIG00000015465	-	81	46.667
ENSPSIG00000008734	GFI1	50	47.429	ENSPSIG00000009893	-	60	47.429
ENSPSIG00000008734	GFI1	59	45.399	ENSPSIG00000005672	-	80	45.399
ENSPSIG00000008734	GFI1	51	39.394	ENSPSIG00000004682	ZNF652	63	39.394
ENSPSIG00000008734	GFI1	67	46.988	ENSPSIG00000012865	-	77	46.988
ENSPSIG00000008734	GFI1	60	46.565	ENSPSIG00000000760	-	91	46.565
ENSPSIG00000008734	GFI1	51	47.260	ENSPSIG00000009603	-	99	47.260
ENSPSIG00000008734	GFI1	82	60.518	ENSPSIG00000012112	GFI1B	90	61.165
ENSPSIG00000008734	GFI1	51	45.802	ENSPSIG00000000522	-	73	45.802
ENSPSIG00000008734	GFI1	50	41.011	ENSPSIG00000013505	PRDM5	74	41.477
ENSPSIG00000008734	GFI1	50	48.227	ENSPSIG00000001739	-	99	48.227
ENSPSIG00000008734	GFI1	50	40.541	ENSPSIG00000000075	-	68	40.541
ENSPSIG00000008734	GFI1	60	49.635	ENSPSIG00000001026	-	90	48.951
ENSPSIG00000008734	GFI1	51	34.400	ENSPSIG00000011896	ZIC3	61	33.523
ENSPSIG00000008734	GFI1	52	40.884	ENSPSIG00000004303	ZNF319	94	41.143
ENSPSIG00000008734	GFI1	51	38.679	ENSPSIG00000002538	ZNF521	59	38.679
ENSPSIG00000008734	GFI1	52	46.429	ENSPSIG00000009650	-	71	46.429
ENSPSIG00000008734	GFI1	50	44.751	ENSPSIG00000004502	-	53	44.751
ENSPSIG00000008734	GFI1	78	46.281	ENSPSIG00000005128	-	100	46.281
ENSPSIG00000008734	GFI1	51	41.600	ENSPSIG00000003152	-	79	41.600
ENSPSIG00000008734	GFI1	50	35.593	ENSPSIG00000016395	SNAI2	54	35.593
ENSPSIG00000008734	GFI1	50	45.181	ENSPSIG00000015459	-	71	45.181
ENSPSIG00000008734	GFI1	51	47.518	ENSPSIG00000010405	-	99	47.518
ENSPSIG00000008734	GFI1	51	45.963	ENSPSIG00000010248	-	64	45.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008734	GFI1	97	75.067	ENSG00000162676	GFI1	88	75.067	Homo_sapiens
ENSPSIG00000008734	GFI1	96	66.282	ENSAPOG00000015189	gfi1ab	86	66.000	Acanthochromis_polyacanthus
ENSPSIG00000008734	GFI1	53	94.681	ENSAMEG00000013858	-	98	94.681	Ailuropoda_melanoleuca
ENSPSIG00000008734	GFI1	97	64.888	ENSACIG00000016354	gfi1ab	88	66.292	Amphilophus_citrinellus
ENSPSIG00000008734	GFI1	96	56.936	ENSAOCG00000008339	gfi1ab	86	56.647	Amphiprion_ocellaris
ENSPSIG00000008734	GFI1	96	67.147	ENSAPEG00000023870	gfi1ab	86	66.857	Amphiprion_percula
ENSPSIG00000008734	GFI1	96	65.407	ENSATEG00000009167	gfi1ab	76	65.116	Anabas_testudineus
ENSPSIG00000008734	GFI1	96	89.306	ENSAPLG00000015700	GFI1	99	89.306	Anas_platyrhynchos
ENSPSIG00000008734	GFI1	98	82.173	ENSACAG00000004498	GFI1	88	82.451	Anolis_carolinensis
ENSPSIG00000008734	GFI1	97	73.995	ENSANAG00000019656	GFI1	88	73.995	Aotus_nancymaae
ENSPSIG00000008734	GFI1	100	64.075	ENSACLG00000026458	gfi1ab	84	63.539	Astatotilapia_calliptera
ENSPSIG00000008734	GFI1	58	55.204	ENSAMXG00000015228	-	69	55.455	Astyanax_mexicanus
ENSPSIG00000008734	GFI1	97	64.672	ENSAMXG00000039600	gfi1ab	87	64.103	Astyanax_mexicanus
ENSPSIG00000008734	GFI1	82	61.356	ENSAMXG00000006669	GFI1	88	61.356	Astyanax_mexicanus
ENSPSIG00000008734	GFI1	97	75.806	ENSBTAG00000016723	GFI1	88	75.806	Bos_taurus
ENSPSIG00000008734	GFI1	97	73.190	ENSCJAG00000017609	GFI1	88	73.458	Callithrix_jacchus
ENSPSIG00000008734	GFI1	97	76.139	ENSCAFG00000020155	GFI1	88	76.139	Canis_familiaris
ENSPSIG00000008734	GFI1	97	76.139	ENSCAFG00020013371	GFI1	78	76.139	Canis_lupus_dingo
ENSPSIG00000008734	GFI1	97	75.806	ENSCHIG00000016135	GFI1	88	75.806	Capra_hircus
ENSPSIG00000008734	GFI1	99	73.753	ENSCPOG00000011727	GFI1	90	73.753	Cavia_porcellus
ENSPSIG00000008734	GFI1	97	73.727	ENSCCAG00000036072	GFI1	88	73.995	Cebus_capucinus
ENSPSIG00000008734	GFI1	97	75.000	ENSCATG00000037873	GFI1	88	75.000	Cercocebus_atys
ENSPSIG00000008734	GFI1	97	79.023	ENSCLAG00000005915	GFI1	88	71.948	Chinchilla_lanigera
ENSPSIG00000008734	GFI1	81	70.064	ENSCSAG00000001469	GFI1	86	70.064	Chlorocebus_sabaeus
ENSPSIG00000008734	GFI1	97	74.731	ENSCANG00000034077	GFI1	88	74.731	Colobus_angolensis_palliatus
ENSPSIG00000008734	GFI1	97	71.046	ENSCGRG00001015432	Gfi1	88	71.850	Cricetulus_griseus_chok1gshd
ENSPSIG00000008734	GFI1	96	64.672	ENSCSEG00000017729	GFI1	86	64.672	Cynoglossus_semilaevis
ENSPSIG00000008734	GFI1	96	67.622	ENSCVAG00000011828	gfi1ab	86	66.954	Cyprinodon_variegatus
ENSPSIG00000008734	GFI1	87	65.741	ENSCVAG00000004930	GFI1	79	65.312	Cyprinodon_variegatus
ENSPSIG00000008734	GFI1	97	69.774	ENSDARG00000044457	gfi1ab	86	69.774	Danio_rerio
ENSPSIG00000008734	GFI1	97	74.332	ENSDNOG00000000782	GFI1	86	75.936	Dasypus_novemcinctus
ENSPSIG00000008734	GFI1	97	76.423	ENSEASG00005015509	GFI1	76	76.423	Equus_asinus_asinus
ENSPSIG00000008734	GFI1	88	67.560	ENSECAG00000006647	GFI1	80	67.560	Equus_caballus
ENSPSIG00000008734	GFI1	97	73.171	ENSEEUG00000000198	GFI1	88	73.442	Erinaceus_europaeus
ENSPSIG00000008734	GFI1	97	69.886	ENSELUG00000003015	gfi1ab	86	69.602	Esox_lucius
ENSPSIG00000008734	GFI1	99	63.056	ENSELUG00000019033	GFI1	88	63.056	Esox_lucius
ENSPSIG00000008734	GFI1	97	75.335	ENSFCAG00000005914	GFI1	88	75.335	Felis_catus
ENSPSIG00000008734	GFI1	97	67.514	ENSFHEG00000010997	gfi1ab	87	67.232	Fundulus_heteroclitus
ENSPSIG00000008734	GFI1	90	66.154	ENSFHEG00000000341	GFI1	85	64.368	Fundulus_heteroclitus
ENSPSIG00000008734	GFI1	91	69.419	ENSGMOG00000007737	gfi1ab	82	69.419	Gadus_morhua
ENSPSIG00000008734	GFI1	100	88.827	ENSGALG00000043650	GFI1	88	88.827	Gallus_gallus
ENSPSIG00000008734	GFI1	87	65.300	ENSGAFG00000018063	GFI1	82	63.798	Gambusia_affinis
ENSPSIG00000008734	GFI1	96	66.667	ENSGAFG00000016637	gfi1ab	86	66.382	Gambusia_affinis
ENSPSIG00000008734	GFI1	96	66.087	ENSGACG00000004257	gfi1ab	83	66.087	Gasterosteus_aculeatus
ENSPSIG00000008734	GFI1	97	75.067	ENSGGOG00000005320	GFI1	88	75.067	Gorilla_gorilla
ENSPSIG00000008734	GFI1	97	66.197	ENSHBUG00000011969	gfi1ab	88	65.634	Haplochromis_burtoni
ENSPSIG00000008734	GFI1	97	73.925	ENSHGLG00000008020	GFI1	88	73.925	Heterocephalus_glaber_female
ENSPSIG00000008734	GFI1	97	73.925	ENSHGLG00100000610	GFI1	88	73.925	Heterocephalus_glaber_male
ENSPSIG00000008734	GFI1	89	62.500	ENSHCOG00000019555	GFI1	85	62.585	Hippocampus_comes
ENSPSIG00000008734	GFI1	94	58.172	ENSHCOG00000008590	gfi1ab	87	56.787	Hippocampus_comes
ENSPSIG00000008734	GFI1	92	69.184	ENSIPUG00000010071	gfi1ab	71	69.184	Ictalurus_punctatus
ENSPSIG00000008734	GFI1	98	62.360	ENSIPUG00000013414	GFI1	88	62.360	Ictalurus_punctatus
ENSPSIG00000008734	GFI1	97	73.995	ENSSTOG00000014583	GFI1	88	74.799	Ictidomys_tridecemlineatus
ENSPSIG00000008734	GFI1	96	67.435	ENSKMAG00000003810	gfi1ab	85	67.147	Kryptolebias_marmoratus
ENSPSIG00000008734	GFI1	96	67.052	ENSLBEG00000027776	gfi1ab	86	66.763	Labrus_bergylta
ENSPSIG00000008734	GFI1	97	78.098	ENSLACG00000013362	GFI1	84	78.098	Latimeria_chalumnae
ENSPSIG00000008734	GFI1	97	74.785	ENSLOCG00000004711	gfi1ab	86	74.785	Lepisosteus_oculatus
ENSPSIG00000008734	GFI1	97	74.176	ENSLAFG00000018346	GFI1	87	74.451	Loxodonta_africana
ENSPSIG00000008734	GFI1	97	75.000	ENSMFAG00000045801	GFI1	88	75.000	Macaca_fascicularis
ENSPSIG00000008734	GFI1	97	75.000	ENSMNEG00000036338	GFI1	88	75.000	Macaca_nemestrina
ENSPSIG00000008734	GFI1	97	75.000	ENSMLEG00000036181	GFI1	88	75.000	Mandrillus_leucophaeus
ENSPSIG00000008734	GFI1	97	66.286	ENSMAMG00000008125	gfi1ab	87	65.714	Mastacembelus_armatus
ENSPSIG00000008734	GFI1	100	64.343	ENSMZEG00005009895	gfi1ab	91	63.807	Maylandia_zebra
ENSPSIG00000008734	GFI1	97	89.049	ENSMGAG00000008187	GFI1	100	89.049	Meleagris_gallopavo
ENSPSIG00000008734	GFI1	97	74.462	ENSMICG00000047208	GFI1	88	75.269	Microcebus_murinus
ENSPSIG00000008734	GFI1	93	64.881	ENSMMOG00000005556	gfi1ab	83	63.095	Mola_mola
ENSPSIG00000008734	GFI1	99	71.907	ENSMODG00000011802	GFI1	89	71.907	Monodelphis_domestica
ENSPSIG00000008734	GFI1	96	65.706	ENSMALG00000014672	gfi1ab	88	65.130	Monopterus_albus
ENSPSIG00000008734	GFI1	97	72.922	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSPSIG00000008734	GFI1	97	74.263	ENSMUSG00000029275	Gfi1	88	74.263	Mus_musculus
ENSPSIG00000008734	GFI1	97	72.654	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSPSIG00000008734	GFI1	97	72.922	MGP_SPRETEiJ_G0028507	Gfi1	88	73.727	Mus_spretus
ENSPSIG00000008734	GFI1	97	77.011	ENSMPUG00000004178	GFI1	84	77.011	Mustela_putorius_furo
ENSPSIG00000008734	GFI1	97	75.202	ENSMLUG00000015191	GFI1	86	74.394	Myotis_lucifugus
ENSPSIG00000008734	GFI1	97	66.292	ENSNBRG00000015774	gfi1ab	85	65.730	Neolamprologus_brichardi
ENSPSIG00000008734	GFI1	97	73.727	ENSNLEG00000010470	GFI1	92	74.799	Nomascus_leucogenys
ENSPSIG00000008734	GFI1	97	75.335	ENSOPRG00000001473	GFI1	88	75.335	Ochotona_princeps
ENSPSIG00000008734	GFI1	100	64.611	ENSONIG00000019246	gfi1ab	91	64.075	Oreochromis_niloticus
ENSPSIG00000008734	GFI1	81	69.401	ENSOCUG00000023553	GFI1	80	70.032	Oryctolagus_cuniculus
ENSPSIG00000008734	GFI1	90	64.815	ENSORLG00000005060	GFI1	87	62.644	Oryzias_latipes
ENSPSIG00000008734	GFI1	96	65.698	ENSORLG00000013806	gfi1ab	85	65.015	Oryzias_latipes
ENSPSIG00000008734	GFI1	82	64.238	ENSORLG00020002817	GFI1	90	64.238	Oryzias_latipes_hni
ENSPSIG00000008734	GFI1	96	66.570	ENSORLG00020001602	gfi1ab	85	65.889	Oryzias_latipes_hni
ENSPSIG00000008734	GFI1	90	64.506	ENSORLG00015006070	GFI1	91	60.989	Oryzias_latipes_hsok
ENSPSIG00000008734	GFI1	99	62.500	ENSOMEG00000016722	GFI1	88	62.500	Oryzias_melastigma
ENSPSIG00000008734	GFI1	100	72.067	ENSOGAG00000027913	GFI1	88	72.067	Otolemur_garnettii
ENSPSIG00000008734	GFI1	97	74.425	ENSPPAG00000042186	GFI1	86	73.563	Pan_paniscus
ENSPSIG00000008734	GFI1	97	75.335	ENSPPRG00000007521	GFI1	88	75.335	Panthera_pardus
ENSPSIG00000008734	GFI1	97	74.799	ENSPTRG00000043053	GFI1	88	74.799	Pan_troglodytes
ENSPSIG00000008734	GFI1	97	75.000	ENSPANG00000016433	GFI1	88	75.000	Papio_anubis
ENSPSIG00000008734	GFI1	97	71.671	ENSPKIG00000004263	GFI1	86	71.105	Paramormyrops_kingsleyae
ENSPSIG00000008734	GFI1	52	85.484	ENSPMGG00000011041	GFI1	59	85.484	Periophthalmus_magnuspinnatus
ENSPSIG00000008734	GFI1	96	65.116	ENSPMGG00000012546	gfi1ab	86	65.116	Periophthalmus_magnuspinnatus
ENSPSIG00000008734	GFI1	99	74.219	ENSPCIG00000013728	GFI1	89	74.278	Phascolarctos_cinereus
ENSPSIG00000008734	GFI1	96	65.812	ENSPFOG00000023214	gfi1ab	86	65.527	Poecilia_formosa
ENSPSIG00000008734	GFI1	53	60.000	ENSPFOG00000024581	-	51	60.000	Poecilia_formosa
ENSPSIG00000008734	GFI1	87	65.517	ENSPLAG00000005376	GFI1	78	63.173	Poecilia_latipinna
ENSPSIG00000008734	GFI1	96	65.812	ENSPLAG00000010879	gfi1ab	88	67.105	Poecilia_latipinna
ENSPSIG00000008734	GFI1	87	65.815	ENSPMEG00000019299	GFI1	92	63.506	Poecilia_mexicana
ENSPSIG00000008734	GFI1	96	65.527	ENSPMEG00000013694	gfi1ab	86	65.242	Poecilia_mexicana
ENSPSIG00000008734	GFI1	83	61.204	ENSPREG00000007997	GFI1	87	54.768	Poecilia_reticulata
ENSPSIG00000008734	GFI1	96	67.049	ENSPREG00000014097	gfi1ab	86	67.049	Poecilia_reticulata
ENSPSIG00000008734	GFI1	97	63.200	ENSPCAG00000011020	GFI1	88	63.200	Procavia_capensis
ENSPSIG00000008734	GFI1	97	74.194	ENSPCOG00000020540	GFI1	88	75.000	Propithecus_coquereli
ENSPSIG00000008734	GFI1	97	75.815	ENSPVAG00000006928	GFI1	88	75.815	Pteropus_vampyrus
ENSPSIG00000008734	GFI1	100	64.075	ENSPNYG00000021183	gfi1ab	91	63.539	Pundamilia_nyererei
ENSPSIG00000008734	GFI1	97	58.571	ENSPNAG00000028014	GFI1	86	58.571	Pygocentrus_nattereri
ENSPSIG00000008734	GFI1	97	66.097	ENSPNAG00000027258	gfi1ab	87	65.527	Pygocentrus_nattereri
ENSPSIG00000008734	GFI1	53	62.941	ENSPNAG00000014299	-	56	62.941	Pygocentrus_nattereri
ENSPSIG00000008734	GFI1	97	74.531	ENSRNOG00000002042	Gfi1	88	74.531	Rattus_norvegicus
ENSPSIG00000008734	GFI1	97	75.000	ENSRBIG00000036467	GFI1	88	75.000	Rhinopithecus_bieti
ENSPSIG00000008734	GFI1	97	75.000	ENSRROG00000031687	GFI1	88	75.000	Rhinopithecus_roxellana
ENSPSIG00000008734	GFI1	97	73.995	ENSSBOG00000031300	GFI1	88	73.995	Saimiri_boliviensis_boliviensis
ENSPSIG00000008734	GFI1	79	63.690	ENSSFOG00015008114	-	52	63.690	Scleropages_formosus
ENSPSIG00000008734	GFI1	97	72.316	ENSSFOG00015020295	gfi1	89	71.751	Scleropages_formosus
ENSPSIG00000008734	GFI1	96	65.896	ENSSMAG00000002782	gfi1ab	86	65.607	Scophthalmus_maximus
ENSPSIG00000008734	GFI1	96	66.087	ENSSDUG00000022410	gfi1ab	87	66.377	Seriola_dumerili
ENSPSIG00000008734	GFI1	96	66.667	ENSSLDG00000020163	gfi1ab	87	66.667	Seriola_lalandi_dorsalis
ENSPSIG00000008734	GFI1	80	67.687	ENSSPAG00000009140	gfi1ab	89	69.178	Stegastes_partitus
ENSPSIG00000008734	GFI1	97	76.152	ENSSSCG00000006902	GFI1	88	76.152	Sus_scrofa
ENSPSIG00000008734	GFI1	97	89.914	ENSTGUG00000006060	GFI1	100	89.914	Taeniopygia_guttata
ENSPSIG00000008734	GFI1	99	63.559	ENSTRUG00000000415	gfi1ab	88	63.277	Takifugu_rubripes
ENSPSIG00000008734	GFI1	98	63.173	ENSTNIG00000000651	gfi1ab	86	62.291	Tetraodon_nigroviridis
ENSPSIG00000008734	GFI1	97	74.799	ENSTTRG00000000082	GFI1	88	75.067	Tursiops_truncatus
ENSPSIG00000008734	GFI1	97	78.090	ENSUAMG00000021124	GFI1	79	78.090	Ursus_americanus
ENSPSIG00000008734	GFI1	95	74.269	ENSXETG00000023006	gfi1	83	74.269	Xenopus_tropicalis
ENSPSIG00000008734	GFI1	96	66.189	ENSXMAG00000010523	gfi1ab	86	65.903	Xiphophorus_maculatus
ENSPSIG00000008734	GFI1	87	58.621	ENSXMAG00000009274	GFI1	60	55.298	Xiphophorus_maculatus
ENSPSIG00000008734	GFI1	53	60.714	ENSXMAG00000006527	-	51	60.714	Xiphophorus_maculatus