EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000008992 (Gene tree)
Gene ID: 102452487
Gene Symbol: SRBD1
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 217549 bases
Position: chrJH209340.1:1359327-1576875
Accession: 102452487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000010168	S1	PF00575.23	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000010220	SRBD1-201	2954	XM_006125474	ENSPSIP00000010168	983 (aa)	XP_006125536	K7FQ58

Gene Model

Click here to download ENSPSIG00000008992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000008992's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000008992	SRBD1	100	73.046	ENSG00000068784	SRBD1	100	72.445	Homo_sapiens
ENSPSIG00000008992	SRBD1	100	51.801	ENSAPOG00000005103	si:ch211-117n7.8	83	58.274	Acanthochromis_polyacanthus
ENSPSIG00000008992	SRBD1	100	73.944	ENSAMEG00000005993	SRBD1	100	73.239	Ailuropoda_melanoleuca
ENSPSIG00000008992	SRBD1	84	57.227	ENSACIG00000009875	si:ch211-117n7.8	85	57.379	Amphilophus_citrinellus
ENSPSIG00000008992	SRBD1	99	52.767	ENSAOCG00000024718	si:ch211-117n7.8	84	58.167	Amphiprion_ocellaris
ENSPSIG00000008992	SRBD1	97	53.885	ENSAPEG00000002645	si:ch211-117n7.8	95	54.963	Amphiprion_percula
ENSPSIG00000008992	SRBD1	99	51.985	ENSATEG00000010844	si:ch211-117n7.8	85	58.083	Anabas_testudineus
ENSPSIG00000008992	SRBD1	100	79.338	ENSAPLG00000006313	SRBD1	100	79.338	Anas_platyrhynchos
ENSPSIG00000008992	SRBD1	100	72.563	ENSANAG00000025573	SRBD1	100	72.161	Aotus_nancymaae
ENSPSIG00000008992	SRBD1	100	51.007	ENSACLG00000024219	si:ch211-117n7.8	82	58.353	Astatotilapia_calliptera
ENSPSIG00000008992	SRBD1	87	60.369	ENSAMXG00000004294	SRBD1	85	60.484	Astyanax_mexicanus
ENSPSIG00000008992	SRBD1	100	73.716	ENSBTAG00000007508	SRBD1	97	73.716	Bos_taurus
ENSPSIG00000008992	SRBD1	100	72.060	ENSCJAG00000000727	SRBD1	100	71.357	Callithrix_jacchus
ENSPSIG00000008992	SRBD1	100	73.948	ENSCAFG00000002554	SRBD1	100	73.246	Canis_familiaris
ENSPSIG00000008992	SRBD1	100	71.013	ENSCAFG00020026284	SRBD1	98	79.953	Canis_lupus_dingo
ENSPSIG00000008992	SRBD1	100	73.817	ENSCHIG00000016535	SRBD1	98	73.817	Capra_hircus
ENSPSIG00000008992	SRBD1	100	73.360	ENSTSYG00000012797	SRBD1	100	72.989	Carlito_syrichta
ENSPSIG00000008992	SRBD1	100	73.790	ENSCPOG00000004773	SRBD1	100	73.259	Cavia_porcellus
ENSPSIG00000008992	SRBD1	100	72.764	ENSCCAG00000025589	SRBD1	100	72.362	Cebus_capucinus
ENSPSIG00000008992	SRBD1	100	72.965	ENSCATG00000039530	SRBD1	100	72.563	Cercocebus_atys
ENSPSIG00000008992	SRBD1	100	74.018	ENSCLAG00000008623	SRBD1	100	73.414	Chinchilla_lanigera
ENSPSIG00000008992	SRBD1	100	72.965	ENSCSAG00000013350	SRBD1	100	72.563	Chlorocebus_sabaeus
ENSPSIG00000008992	SRBD1	87	86.275	ENSCHOG00000003805	SRBD1	87	86.275	Choloepus_hoffmanni
ENSPSIG00000008992	SRBD1	100	92.988	ENSCPBG00000005677	SRBD1	100	92.988	Chrysemys_picta_bellii
ENSPSIG00000008992	SRBD1	79	42.621	ENSCING00000005950	-	99	42.621	Ciona_intestinalis
ENSPSIG00000008992	SRBD1	80	43.127	ENSCSAVG00000000861	-	99	43.127	Ciona_savignyi
ENSPSIG00000008992	SRBD1	99	72.810	ENSCANG00000016307	SRBD1	99	72.144	Colobus_angolensis_palliatus
ENSPSIG00000008992	SRBD1	100	73.340	ENSCGRG00001000513	Srbd1	100	73.065	Cricetulus_griseus_chok1gshd
ENSPSIG00000008992	SRBD1	100	73.340	ENSCGRG00000002283	Srbd1	100	73.065	Cricetulus_griseus_crigri
ENSPSIG00000008992	SRBD1	99	50.733	ENSCSEG00000000856	si:ch211-117n7.8	84	57.109	Cynoglossus_semilaevis
ENSPSIG00000008992	SRBD1	89	56.376	ENSCVAG00000020212	si:ch211-117n7.8	94	56.146	Cyprinodon_variegatus
ENSPSIG00000008992	SRBD1	100	73.280	ENSDNOG00000018686	SRBD1	100	73.008	Dasypus_novemcinctus
ENSPSIG00000008992	SRBD1	100	72.306	ENSDORG00000010468	Srbd1	100	72.306	Dipodomys_ordii
ENSPSIG00000008992	SRBD1	80	36.973	FBgn0051156	CG31156	79	36.973	Drosophila_melanogaster
ENSPSIG00000008992	SRBD1	89	74.955	ENSETEG00000000739	SRBD1	86	74.955	Echinops_telfairi
ENSPSIG00000008992	SRBD1	74	49.319	ENSEBUG00000008902	si:ch211-117n7.8	96	49.319	Eptatretus_burgeri
ENSPSIG00000008992	SRBD1	100	71.900	ENSEASG00005003132	SRBD1	97	82.166	Equus_asinus_asinus
ENSPSIG00000008992	SRBD1	100	74.551	ENSECAG00000013865	SRBD1	98	73.852	Equus_caballus
ENSPSIG00000008992	SRBD1	97	54.617	ENSELUG00000012592	si:ch211-117n7.8	81	60.752	Esox_lucius
ENSPSIG00000008992	SRBD1	100	74.248	ENSFCAG00000005101	SRBD1	100	73.948	Felis_catus
ENSPSIG00000008992	SRBD1	100	78.680	ENSFALG00000012966	SRBD1	100	78.680	Ficedula_albicollis
ENSPSIG00000008992	SRBD1	98	73.733	ENSFDAG00000016670	SRBD1	94	75.682	Fukomys_damarensis
ENSPSIG00000008992	SRBD1	96	54.318	ENSFHEG00000019480	si:ch211-117n7.8	82	58.726	Fundulus_heteroclitus
ENSPSIG00000008992	SRBD1	51	53.153	ENSGMOG00000018010	-	100	53.153	Gadus_morhua
ENSPSIG00000008992	SRBD1	100	79.412	ENSGALG00000009990	SRBD1	100	79.412	Gallus_gallus
ENSPSIG00000008992	SRBD1	98	51.500	ENSGAFG00000019664	si:ch211-117n7.8	84	57.497	Gambusia_affinis
ENSPSIG00000008992	SRBD1	63	59.748	ENSGACG00000010794	si:ch211-117n7.8	100	60.348	Gasterosteus_aculeatus
ENSPSIG00000008992	SRBD1	96	86.667	ENSGAGG00000006166	SRBD1	100	94.238	Gopherus_agassizii
ENSPSIG00000008992	SRBD1	97	73.690	ENSGGOG00000005910	SRBD1	95	76.004	Gorilla_gorilla
ENSPSIG00000008992	SRBD1	84	51.199	ENSHBUG00000013207	si:ch211-117n7.8	85	51.442	Haplochromis_burtoni
ENSPSIG00000008992	SRBD1	99	73.022	ENSHGLG00000018153	-	99	72.368	Heterocephalus_glaber_female
ENSPSIG00000008992	SRBD1	99	73.124	ENSHGLG00100015183	-	99	72.470	Heterocephalus_glaber_male
ENSPSIG00000008992	SRBD1	86	61.013	ENSIPUG00000009661	srbd1	85	61.013	Ictalurus_punctatus
ENSPSIG00000008992	SRBD1	100	73.992	ENSSTOG00000005898	SRBD1	100	73.589	Ictidomys_tridecemlineatus
ENSPSIG00000008992	SRBD1	100	70.170	ENSJJAG00000022244	Srbd1	100	69.770	Jaculus_jaculus
ENSPSIG00000008992	SRBD1	99	51.613	ENSKMAG00000003473	si:ch211-117n7.8	83	57.665	Kryptolebias_marmoratus
ENSPSIG00000008992	SRBD1	98	51.697	ENSLBEG00000027518	si:ch211-117n7.8	82	57.295	Labrus_bergylta
ENSPSIG00000008992	SRBD1	86	73.697	ENSLACG00000009790	SRBD1	99	73.697	Latimeria_chalumnae
ENSPSIG00000008992	SRBD1	96	60.928	ENSLOCG00000016360	si:ch211-117n7.8	85	66.040	Lepisosteus_oculatus
ENSPSIG00000008992	SRBD1	100	72.965	ENSMFAG00000042026	SRBD1	100	72.563	Macaca_fascicularis
ENSPSIG00000008992	SRBD1	100	72.965	ENSMMUG00000003490	SRBD1	100	72.563	Macaca_mulatta
ENSPSIG00000008992	SRBD1	100	70.553	ENSMNEG00000034701	SRBD1	100	70.151	Macaca_nemestrina
ENSPSIG00000008992	SRBD1	100	72.864	ENSMLEG00000000745	SRBD1	100	72.462	Mandrillus_leucophaeus
ENSPSIG00000008992	SRBD1	100	50.882	ENSMAMG00000021921	si:ch211-117n7.8	89	54.254	Mastacembelus_armatus
ENSPSIG00000008992	SRBD1	100	51.007	ENSMZEG00005027369	si:ch211-117n7.8	82	58.353	Maylandia_zebra
ENSPSIG00000008992	SRBD1	81	80.928	ENSMGAG00000010273	SRBD1	99	80.928	Meleagris_gallopavo
ENSPSIG00000008992	SRBD1	82	76.631	ENSMAUG00000013916	Srbd1	99	76.631	Mesocricetus_auratus
ENSPSIG00000008992	SRBD1	100	73.747	ENSMICG00000007835	SRBD1	100	73.046	Microcebus_murinus
ENSPSIG00000008992	SRBD1	100	72.088	ENSMOCG00000018716	Srbd1	100	71.630	Microtus_ochrogaster
ENSPSIG00000008992	SRBD1	97	52.041	ENSMMOG00000007507	si:ch211-117n7.8	88	56.593	Mola_mola
ENSPSIG00000008992	SRBD1	99	50.818	ENSMALG00000001562	si:ch211-117n7.8	83	58.422	Monopterus_albus
ENSPSIG00000008992	SRBD1	100	71.903	MGP_CAROLIEiJ_G0021934	Srbd1	99	79.100	Mus_caroli
ENSPSIG00000008992	SRBD1	100	71.976	ENSMUSG00000024135	Srbd1	99	79.082	Mus_musculus
ENSPSIG00000008992	SRBD1	100	70.464	MGP_PahariEiJ_G0020924	Srbd1	100	70.161	Mus_pahari
ENSPSIG00000008992	SRBD1	100	72.077	MGP_SPRETEiJ_G0022850	Srbd1	100	71.903	Mus_spretus
ENSPSIG00000008992	SRBD1	100	72.244	ENSMLUG00000007039	SRBD1	100	71.643	Myotis_lucifugus
ENSPSIG00000008992	SRBD1	100	70.588	ENSNGAG00000011893	Srbd1	100	70.146	Nannospalax_galili
ENSPSIG00000008992	SRBD1	97	51.512	ENSNBRG00000012873	si:ch211-117n7.8	85	57.330	Neolamprologus_brichardi
ENSPSIG00000008992	SRBD1	100	73.293	ENSNLEG00000016877	SRBD1	100	72.727	Nomascus_leucogenys
ENSPSIG00000008992	SRBD1	100	72.093	ENSODEG00000012095	SRBD1	100	71.544	Octodon_degus
ENSPSIG00000008992	SRBD1	99	50.616	ENSONIG00000000945	si:ch211-117n7.8	99	58.629	Oreochromis_niloticus
ENSPSIG00000008992	SRBD1	100	73.944	ENSOCUG00000015385	SRBD1	100	73.817	Oryctolagus_cuniculus
ENSPSIG00000008992	SRBD1	99	48.745	ENSORLG00000004427	si:ch211-117n7.8	83	54.273	Oryzias_latipes
ENSPSIG00000008992	SRBD1	99	51.731	ENSORLG00020012792	si:ch211-117n7.8	83	57.209	Oryzias_latipes_hni
ENSPSIG00000008992	SRBD1	99	51.927	ENSORLG00015018598	si:ch211-117n7.8	85	56.502	Oryzias_latipes_hsok
ENSPSIG00000008992	SRBD1	98	51.539	ENSOMEG00000012229	si:ch211-117n7.8	83	57.326	Oryzias_melastigma
ENSPSIG00000008992	SRBD1	100	68.876	ENSOGAG00000001076	SRBD1	100	69.347	Otolemur_garnettii
ENSPSIG00000008992	SRBD1	100	69.380	ENSOARG00000005958	SRBD1	100	69.380	Ovis_aries
ENSPSIG00000008992	SRBD1	100	72.627	ENSPPAG00000038442	SRBD1	100	72.545	Pan_paniscus
ENSPSIG00000008992	SRBD1	100	74.022	ENSPPRG00000003449	SRBD1	100	73.821	Panthera_pardus
ENSPSIG00000008992	SRBD1	100	74.300	ENSPTIG00000012495	SRBD1	100	74.100	Panthera_tigris_altaica
ENSPSIG00000008992	SRBD1	100	72.627	ENSPTRG00000011889	SRBD1	100	72.545	Pan_troglodytes
ENSPSIG00000008992	SRBD1	100	72.864	ENSPANG00000008063	SRBD1	100	71.960	Papio_anubis
ENSPSIG00000008992	SRBD1	84	61.705	ENSPKIG00000021973	si:ch211-117n7.8	85	61.705	Paramormyrops_kingsleyae
ENSPSIG00000008992	SRBD1	84	55.830	ENSPMGG00000013348	si:ch211-117n7.8	86	55.948	Periophthalmus_magnuspinnatus
ENSPSIG00000008992	SRBD1	100	70.577	ENSPEMG00000020684	Srbd1	100	70.088	Peromyscus_maniculatus_bairdii
ENSPSIG00000008992	SRBD1	100	51.610	ENSPFOG00000010650	si:ch211-117n7.8	84	57.706	Poecilia_formosa
ENSPSIG00000008992	SRBD1	100	51.613	ENSPLAG00000002141	si:ch211-117n7.8	83	58.205	Poecilia_latipinna
ENSPSIG00000008992	SRBD1	100	51.798	ENSPMEG00000018537	si:ch211-117n7.8	84	57.706	Poecilia_mexicana
ENSPSIG00000008992	SRBD1	84	58.323	ENSPREG00000003258	si:ch211-117n7.8	85	58.323	Poecilia_reticulata
ENSPSIG00000008992	SRBD1	100	67.235	ENSPPYG00000012444	SRBD1	99	67.045	Pongo_abelii
ENSPSIG00000008992	SRBD1	77	73.838	ENSPCAG00000005629	SRBD1	80	73.838	Procavia_capensis
ENSPSIG00000008992	SRBD1	100	62.124	ENSPCOG00000017669	SRBD1	100	61.600	Propithecus_coquereli
ENSPSIG00000008992	SRBD1	100	65.396	ENSPVAG00000001782	SRBD1	100	65.095	Pteropus_vampyrus
ENSPSIG00000008992	SRBD1	84	55.529	ENSPNYG00000000508	si:ch211-117n7.8	85	55.781	Pundamilia_nyererei
ENSPSIG00000008992	SRBD1	97	58.081	ENSPNAG00000013492	SRBD1	92	58.963	Pygocentrus_nattereri
ENSPSIG00000008992	SRBD1	100	70.200	ENSRNOG00000014720	Srbd1	99	69.830	Rattus_norvegicus
ENSPSIG00000008992	SRBD1	99	72.709	ENSRBIG00000033486	SRBD1	99	72.306	Rhinopithecus_bieti
ENSPSIG00000008992	SRBD1	99	72.709	ENSRROG00000041599	SRBD1	99	72.306	Rhinopithecus_roxellana
ENSPSIG00000008992	SRBD1	100	72.563	ENSSBOG00000024982	SRBD1	100	72.161	Saimiri_boliviensis_boliviensis
ENSPSIG00000008992	SRBD1	86	60.000	ENSSFOG00015001128	si:ch211-117n7.8	92	60.000	Scleropages_formosus
ENSPSIG00000008992	SRBD1	99	50.862	ENSSMAG00000018256	si:ch211-117n7.8	82	57.479	Scophthalmus_maximus
ENSPSIG00000008992	SRBD1	84	57.615	ENSSLDG00000023189	si:ch211-117n7.8	83	57.615	Seriola_lalandi_dorsalis
ENSPSIG00000008992	SRBD1	100	66.935	ENSSARG00000009740	SRBD1	100	65.861	Sorex_araneus
ENSPSIG00000008992	SRBD1	96	78.737	ENSSPUG00000010475	SRBD1	98	82.179	Sphenodon_punctatus
ENSPSIG00000008992	SRBD1	95	52.886	ENSSPAG00000008092	-	91	53.518	Stegastes_partitus
ENSPSIG00000008992	SRBD1	100	74.624	ENSSSCG00000008445	SRBD1	98	74.624	Sus_scrofa
ENSPSIG00000008992	SRBD1	84	84.318	ENSTGUG00000003878	SRBD1	100	84.318	Taeniopygia_guttata
ENSPSIG00000008992	SRBD1	99	51.054	ENSTRUG00000007080	si:ch211-117n7.8	94	57.242	Takifugu_rubripes
ENSPSIG00000008992	SRBD1	98	51.443	ENSTNIG00000007464	si:ch211-117n7.8	93	52.500	Tetraodon_nigroviridis
ENSPSIG00000008992	SRBD1	76	95.745	ENSTBEG00000004556	SRBD1	76	95.745	Tupaia_belangeri
ENSPSIG00000008992	SRBD1	93	76.667	ENSTTRG00000011871	SRBD1	93	76.667	Tursiops_truncatus
ENSPSIG00000008992	SRBD1	100	74.074	ENSUAMG00000008126	SRBD1	97	77.536	Ursus_americanus
ENSPSIG00000008992	SRBD1	100	73.974	ENSUMAG00000012902	SRBD1	98	73.320	Ursus_maritimus
ENSPSIG00000008992	SRBD1	90	77.329	ENSVPAG00000006825	SRBD1	98	77.329	Vicugna_pacos
ENSPSIG00000008992	SRBD1	100	73.992	ENSVVUG00000005389	SRBD1	100	73.488	Vulpes_vulpes
ENSPSIG00000008992	SRBD1	100	54.067	ENSXETG00000002760	srbd1	100	54.415	Xenopus_tropicalis
ENSPSIG00000008992	SRBD1	98	51.236	ENSXMAG00000016861	si:ch211-117n7.8	83	57.193	Xiphophorus_maculatus