EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000009173 (Gene tree)
Gene ID: 102455660
Gene Symbol: CSTF3
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 92382 bases
Position: chrJH204860.1:467524-559905
Accession: 102455660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000010115	Suf	PF05843.14	2.9e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000010166	CSTF3-201	2834	XM_006110279	ENSPSIP00000010115	718 (aa)	XP_006110341	K7FQ05

Gene Model

Click here to download ENSPSIG00000009173's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000009173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000009173	CSTF3	100	96.936	ENSG00000176102	CSTF3	100	96.936	Homo_sapiens
ENSPSIG00000009173	CSTF3	100	91.504	ENSAPOG00000014054	cstf3	100	91.504	Acanthochromis_polyacanthus
ENSPSIG00000009173	CSTF3	99	97.602	ENSAMEG00000007187	CSTF3	98	97.602	Ailuropoda_melanoleuca
ENSPSIG00000009173	CSTF3	87	86.400	ENSACIG00000005539	cstf3	100	86.400	Amphilophus_citrinellus
ENSPSIG00000009173	CSTF3	100	91.365	ENSAOCG00000010930	cstf3	100	91.365	Amphiprion_ocellaris
ENSPSIG00000009173	CSTF3	100	91.365	ENSAPEG00000007903	cstf3	100	91.365	Amphiprion_percula
ENSPSIG00000009173	CSTF3	100	91.365	ENSATEG00000000190	cstf3	100	91.365	Anabas_testudineus
ENSPSIG00000009173	CSTF3	99	98.305	ENSAPLG00000007217	CSTF3	100	98.305	Anas_platyrhynchos
ENSPSIG00000009173	CSTF3	100	96.936	ENSACAG00000002823	CSTF3	100	96.936	Anolis_carolinensis
ENSPSIG00000009173	CSTF3	100	96.936	ENSANAG00000020699	CSTF3	100	97.120	Aotus_nancymaae
ENSPSIG00000009173	CSTF3	98	92.057	ENSACLG00000007820	cstf3	100	91.365	Astatotilapia_calliptera
ENSPSIG00000009173	CSTF3	100	90.821	ENSAMXG00000014198	cstf3	100	91.099	Astyanax_mexicanus
ENSPSIG00000009173	CSTF3	100	96.936	ENSBTAG00000008617	CSTF3	100	97.329	Bos_taurus
ENSPSIG00000009173	CSTF3	97	49.315	WBGene00006307	suf-1	99	49.315	Caenorhabditis_elegans
ENSPSIG00000009173	CSTF3	100	96.936	ENSCJAG00000005533	CSTF3	100	97.120	Callithrix_jacchus
ENSPSIG00000009173	CSTF3	100	96.936	ENSCAFG00000007264	CSTF3	100	96.936	Canis_familiaris
ENSPSIG00000009173	CSTF3	99	97.461	ENSCAFG00020002715	CSTF3	99	97.461	Canis_lupus_dingo
ENSPSIG00000009173	CSTF3	98	95.875	ENSCHIG00000016418	CSTF3	100	97.120	Capra_hircus
ENSPSIG00000009173	CSTF3	99	97.320	ENSTSYG00000000451	CSTF3	99	99.556	Carlito_syrichta
ENSPSIG00000009173	CSTF3	83	91.469	ENSCAPG00000010958	CSTF3	98	91.469	Cavia_aperea
ENSPSIG00000009173	CSTF3	100	97.075	ENSCPOG00000005545	CSTF3	100	97.195	Cavia_porcellus
ENSPSIG00000009173	CSTF3	100	96.936	ENSCCAG00000024790	CSTF3	100	97.120	Cebus_capucinus
ENSPSIG00000009173	CSTF3	100	96.936	ENSCATG00000007080	CSTF3	100	97.120	Cercocebus_atys
ENSPSIG00000009173	CSTF3	100	96.936	ENSCLAG00000016179	CSTF3	100	96.936	Chinchilla_lanigera
ENSPSIG00000009173	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSPSIG00000009173	CSTF3	100	99.025	ENSCPBG00000006753	CSTF3	100	99.025	Chrysemys_picta_bellii
ENSPSIG00000009173	CSTF3	98	62.605	ENSCING00000006401	-	98	62.605	Ciona_intestinalis
ENSPSIG00000009173	CSTF3	98	62.483	ENSCSAVG00000004851	-	100	62.483	Ciona_savignyi
ENSPSIG00000009173	CSTF3	100	96.936	ENSCANG00000035468	CSTF3	100	97.120	Colobus_angolensis_palliatus
ENSPSIG00000009173	CSTF3	100	96.797	ENSCGRG00001014773	Cstf3	100	96.797	Cricetulus_griseus_chok1gshd
ENSPSIG00000009173	CSTF3	100	96.797	ENSCGRG00000004142	Cstf3	100	96.797	Cricetulus_griseus_crigri
ENSPSIG00000009173	CSTF3	100	91.504	ENSCSEG00000014283	cstf3	100	91.504	Cynoglossus_semilaevis
ENSPSIG00000009173	CSTF3	100	90.390	ENSCVAG00000019739	cstf3	100	90.390	Cyprinodon_variegatus
ENSPSIG00000009173	CSTF3	99	92.254	ENSDARG00000018904	cstf3	99	92.254	Danio_rerio
ENSPSIG00000009173	CSTF3	99	97.320	ENSDNOG00000007366	CSTF3	99	97.320	Dasypus_novemcinctus
ENSPSIG00000009173	CSTF3	99	89.704	ENSDORG00000005898	Cstf3	99	89.704	Dipodomys_ordii
ENSPSIG00000009173	CSTF3	98	57.459	FBgn0003559	su(f)	98	57.459	Drosophila_melanogaster
ENSPSIG00000009173	CSTF3	89	92.056	ENSETEG00000017097	CSTF3	90	92.056	Echinops_telfairi
ENSPSIG00000009173	CSTF3	84	74.215	ENSEBUG00000015459	cstf3	96	74.215	Eptatretus_burgeri
ENSPSIG00000009173	CSTF3	99	96.192	ENSEASG00005019884	CSTF3	100	97.571	Equus_asinus_asinus
ENSPSIG00000009173	CSTF3	99	96.192	ENSECAG00000023338	CSTF3	100	97.571	Equus_caballus
ENSPSIG00000009173	CSTF3	100	91.643	ENSEEUG00000015167	CSTF3	100	91.643	Erinaceus_europaeus
ENSPSIG00000009173	CSTF3	100	89.972	ENSELUG00000023393	cstf3	100	89.972	Esox_lucius
ENSPSIG00000009173	CSTF3	100	96.936	ENSFCAG00000030711	CSTF3	100	96.936	Felis_catus
ENSPSIG00000009173	CSTF3	93	98.498	ENSFALG00000010764	CSTF3	100	97.235	Ficedula_albicollis
ENSPSIG00000009173	CSTF3	100	96.936	ENSFDAG00000012082	CSTF3	100	96.936	Fukomys_damarensis
ENSPSIG00000009173	CSTF3	100	90.390	ENSFHEG00000020623	cstf3	100	90.390	Fundulus_heteroclitus
ENSPSIG00000009173	CSTF3	100	89.847	ENSGMOG00000012275	cstf3	100	89.847	Gadus_morhua
ENSPSIG00000009173	CSTF3	100	97.772	ENSGALG00000011685	CSTF3	100	97.772	Gallus_gallus
ENSPSIG00000009173	CSTF3	100	90.669	ENSGAFG00000002181	cstf3	100	90.669	Gambusia_affinis
ENSPSIG00000009173	CSTF3	100	90.808	ENSGACG00000015997	cstf3	100	90.808	Gasterosteus_aculeatus
ENSPSIG00000009173	CSTF3	100	99.025	ENSGAGG00000006200	CSTF3	100	99.025	Gopherus_agassizii
ENSPSIG00000009173	CSTF3	99	91.537	ENSGGOG00000026591	CSTF3	96	94.667	Gorilla_gorilla
ENSPSIG00000009173	CSTF3	98	92.057	ENSHBUG00000016656	cstf3	100	91.365	Haplochromis_burtoni
ENSPSIG00000009173	CSTF3	100	96.936	ENSHGLG00000017834	CSTF3	100	96.936	Heterocephalus_glaber_female
ENSPSIG00000009173	CSTF3	100	96.936	ENSHGLG00100018042	CSTF3	100	96.936	Heterocephalus_glaber_male
ENSPSIG00000009173	CSTF3	100	88.579	ENSHCOG00000015218	cstf3	100	88.579	Hippocampus_comes
ENSPSIG00000009173	CSTF3	100	90.669	ENSIPUG00000013170	CSTF3	100	90.669	Ictalurus_punctatus
ENSPSIG00000009173	CSTF3	100	96.936	ENSSTOG00000013306	CSTF3	100	96.936	Ictidomys_tridecemlineatus
ENSPSIG00000009173	CSTF3	99	85.414	ENSJJAG00000018430	Cstf3	99	85.414	Jaculus_jaculus
ENSPSIG00000009173	CSTF3	100	89.972	ENSKMAG00000010916	cstf3	100	89.972	Kryptolebias_marmoratus
ENSPSIG00000009173	CSTF3	100	90.390	ENSLBEG00000002306	cstf3	100	90.390	Labrus_bergylta
ENSPSIG00000009173	CSTF3	100	93.593	ENSLACG00000017296	CSTF3	100	93.593	Latimeria_chalumnae
ENSPSIG00000009173	CSTF3	100	93.733	ENSLOCG00000004415	cstf3	100	93.733	Lepisosteus_oculatus
ENSPSIG00000009173	CSTF3	100	97.214	ENSLAFG00000008712	CSTF3	100	97.214	Loxodonta_africana
ENSPSIG00000009173	CSTF3	100	96.936	ENSMFAG00000029516	CSTF3	100	97.120	Macaca_fascicularis
ENSPSIG00000009173	CSTF3	100	96.936	ENSMMUG00000002542	CSTF3	100	96.936	Macaca_mulatta
ENSPSIG00000009173	CSTF3	100	96.936	ENSMNEG00000021807	CSTF3	100	97.120	Macaca_nemestrina
ENSPSIG00000009173	CSTF3	100	96.936	ENSMLEG00000039594	CSTF3	100	97.120	Mandrillus_leucophaeus
ENSPSIG00000009173	CSTF3	100	91.226	ENSMAMG00000020423	cstf3	100	91.226	Mastacembelus_armatus
ENSPSIG00000009173	CSTF3	98	92.057	ENSMZEG00005012082	cstf3	100	91.365	Maylandia_zebra
ENSPSIG00000009173	CSTF3	100	97.632	ENSMGAG00000001383	CSTF3	100	97.632	Meleagris_gallopavo
ENSPSIG00000009173	CSTF3	100	96.797	ENSMAUG00000002487	Cstf3	100	96.797	Mesocricetus_auratus
ENSPSIG00000009173	CSTF3	100	96.936	ENSMICG00000004784	CSTF3	100	97.120	Microcebus_murinus
ENSPSIG00000009173	CSTF3	100	96.797	ENSMOCG00000017583	Cstf3	100	96.797	Microtus_ochrogaster
ENSPSIG00000009173	CSTF3	99	91.525	ENSMMOG00000016026	cstf3	94	91.525	Mola_mola
ENSPSIG00000009173	CSTF3	100	96.797	ENSMODG00000009745	-	100	96.797	Monodelphis_domestica
ENSPSIG00000009173	CSTF3	99	83.473	ENSMODG00000025205	-	99	83.473	Monodelphis_domestica
ENSPSIG00000009173	CSTF3	100	90.947	ENSMALG00000012050	cstf3	100	90.947	Monopterus_albus
ENSPSIG00000009173	CSTF3	100	96.797	MGP_CAROLIEiJ_G0024026	Cstf3	100	96.797	Mus_caroli
ENSPSIG00000009173	CSTF3	100	96.797	ENSMUSG00000027176	Cstf3	100	96.797	Mus_musculus
ENSPSIG00000009173	CSTF3	100	96.797	MGP_PahariEiJ_G0025464	Cstf3	100	96.797	Mus_pahari
ENSPSIG00000009173	CSTF3	100	96.797	MGP_SPRETEiJ_G0024939	Cstf3	100	96.797	Mus_spretus
ENSPSIG00000009173	CSTF3	100	97.075	ENSMPUG00000011457	CSTF3	100	97.075	Mustela_putorius_furo
ENSPSIG00000009173	CSTF3	100	94.429	ENSMLUG00000026022	-	100	94.429	Myotis_lucifugus
ENSPSIG00000009173	CSTF3	99	97.468	ENSMLUG00000003073	-	99	97.468	Myotis_lucifugus
ENSPSIG00000009173	CSTF3	100	97.075	ENSNGAG00000010677	Cstf3	100	97.075	Nannospalax_galili
ENSPSIG00000009173	CSTF3	87	91.360	ENSNBRG00000007345	cstf3	100	91.360	Neolamprologus_brichardi
ENSPSIG00000009173	CSTF3	100	96.936	ENSNLEG00000017901	CSTF3	100	97.120	Nomascus_leucogenys
ENSPSIG00000009173	CSTF3	73	94.837	ENSMEUG00000005640	-	100	94.837	Notamacropus_eugenii
ENSPSIG00000009173	CSTF3	67	94.737	ENSOPRG00000000199	-	67	94.737	Ochotona_princeps
ENSPSIG00000009173	CSTF3	100	96.936	ENSODEG00000016737	-	100	96.936	Octodon_degus
ENSPSIG00000009173	CSTF3	89	84.906	ENSODEG00000006311	-	97	84.906	Octodon_degus
ENSPSIG00000009173	CSTF3	98	92.057	ENSONIG00000005563	cstf3	100	91.365	Oreochromis_niloticus
ENSPSIG00000009173	CSTF3	90	96.923	ENSOANG00000015140	CSTF3	100	96.923	Ornithorhynchus_anatinus
ENSPSIG00000009173	CSTF3	100	96.936	ENSOCUG00000015417	CSTF3	100	96.936	Oryctolagus_cuniculus
ENSPSIG00000009173	CSTF3	100	91.086	ENSORLG00000009762	cstf3	100	91.086	Oryzias_latipes
ENSPSIG00000009173	CSTF3	100	91.086	ENSORLG00020005540	cstf3	100	91.086	Oryzias_latipes_hni
ENSPSIG00000009173	CSTF3	100	90.947	ENSORLG00015003551	cstf3	100	90.947	Oryzias_latipes_hsok
ENSPSIG00000009173	CSTF3	100	90.669	ENSOMEG00000003848	cstf3	100	90.669	Oryzias_melastigma
ENSPSIG00000009173	CSTF3	100	96.810	ENSOGAG00000010229	CSTF3	100	96.810	Otolemur_garnettii
ENSPSIG00000009173	CSTF3	90	97.045	ENSOARG00000017271	CSTF3	99	97.045	Ovis_aries
ENSPSIG00000009173	CSTF3	99	93.935	ENSPPAG00000027358	CSTF3	99	93.935	Pan_paniscus
ENSPSIG00000009173	CSTF3	100	96.936	ENSPPRG00000016852	CSTF3	100	96.936	Panthera_pardus
ENSPSIG00000009173	CSTF3	100	96.936	ENSPTIG00000008716	CSTF3	100	96.936	Panthera_tigris_altaica
ENSPSIG00000009173	CSTF3	100	96.936	ENSPTRG00000003485	CSTF3	100	96.936	Pan_troglodytes
ENSPSIG00000009173	CSTF3	100	96.936	ENSPANG00000013722	CSTF3	100	96.936	Papio_anubis
ENSPSIG00000009173	CSTF3	100	91.922	ENSPKIG00000023648	cstf3	100	91.922	Paramormyrops_kingsleyae
ENSPSIG00000009173	CSTF3	76	94.891	ENSPMGG00000000164	cstf3	99	94.891	Periophthalmus_magnuspinnatus
ENSPSIG00000009173	CSTF3	100	96.797	ENSPEMG00000011481	Cstf3	100	96.797	Peromyscus_maniculatus_bairdii
ENSPSIG00000009173	CSTF3	99	80.337	ENSPMAG00000007282	cstf3	100	79.612	Petromyzon_marinus
ENSPSIG00000009173	CSTF3	100	80.111	ENSPCIG00000030419	-	90	80.389	Phascolarctos_cinereus
ENSPSIG00000009173	CSTF3	99	95.070	ENSPCIG00000026406	-	100	97.120	Phascolarctos_cinereus
ENSPSIG00000009173	CSTF3	100	90.808	ENSPFOG00000017239	cstf3	100	90.808	Poecilia_formosa
ENSPSIG00000009173	CSTF3	100	90.808	ENSPLAG00000009456	cstf3	100	90.808	Poecilia_latipinna
ENSPSIG00000009173	CSTF3	100	90.808	ENSPMEG00000010320	cstf3	100	90.808	Poecilia_mexicana
ENSPSIG00000009173	CSTF3	100	90.808	ENSPREG00000013549	cstf3	100	90.808	Poecilia_reticulata
ENSPSIG00000009173	CSTF3	100	96.936	ENSPPYG00000003375	CSTF3	100	96.936	Pongo_abelii
ENSPSIG00000009173	CSTF3	71	99.303	ENSPCAG00000008025	-	71	99.303	Procavia_capensis
ENSPSIG00000009173	CSTF3	100	91.783	ENSPCOG00000014417	CSTF3	100	91.783	Propithecus_coquereli
ENSPSIG00000009173	CSTF3	100	91.504	ENSPVAG00000002350	CSTF3	100	91.504	Pteropus_vampyrus
ENSPSIG00000009173	CSTF3	98	92.057	ENSPNYG00000018259	cstf3	100	91.365	Pundamilia_nyererei
ENSPSIG00000009173	CSTF3	100	92.061	ENSPNAG00000020182	cstf3	100	92.061	Pygocentrus_nattereri
ENSPSIG00000009173	CSTF3	87	96.640	ENSRNOG00000012089	Cstf3	100	96.640	Rattus_norvegicus
ENSPSIG00000009173	CSTF3	99	96.051	ENSRBIG00000044258	CSTF3	100	97.120	Rhinopithecus_bieti
ENSPSIG00000009173	CSTF3	100	96.936	ENSRROG00000043450	CSTF3	100	97.120	Rhinopithecus_roxellana
ENSPSIG00000009173	CSTF3	100	96.936	ENSSBOG00000024764	CSTF3	98	99.556	Saimiri_boliviensis_boliviensis
ENSPSIG00000009173	CSTF3	100	84.680	ENSSHAG00000003135	-	99	84.680	Sarcophilus_harrisii
ENSPSIG00000009173	CSTF3	100	95.961	ENSSHAG00000018128	-	100	95.961	Sarcophilus_harrisii
ENSPSIG00000009173	CSTF3	100	93.175	ENSSFOG00015022133	cstf3	100	93.175	Scleropages_formosus
ENSPSIG00000009173	CSTF3	100	90.529	ENSSMAG00000002197	cstf3	100	90.529	Scophthalmus_maximus
ENSPSIG00000009173	CSTF3	100	91.365	ENSSDUG00000020426	cstf3	100	91.365	Seriola_dumerili
ENSPSIG00000009173	CSTF3	100	91.504	ENSSLDG00000025649	cstf3	100	91.504	Seriola_lalandi_dorsalis
ENSPSIG00000009173	CSTF3	100	96.936	ENSSARG00000000391	CSTF3	100	96.936	Sorex_araneus
ENSPSIG00000009173	CSTF3	96	97.395	ENSSPUG00000010546	CSTF3	100	97.395	Sphenodon_punctatus
ENSPSIG00000009173	CSTF3	100	91.365	ENSSPAG00000004958	cstf3	100	91.365	Stegastes_partitus
ENSPSIG00000009173	CSTF3	99	96.774	ENSSSCG00000040954	CSTF3	99	96.774	Sus_scrofa
ENSPSIG00000009173	CSTF3	99	98.023	ENSTGUG00000005010	CSTF3	100	98.023	Taeniopygia_guttata
ENSPSIG00000009173	CSTF3	100	89.554	ENSTRUG00000004959	cstf3	100	89.554	Takifugu_rubripes
ENSPSIG00000009173	CSTF3	99	90.960	ENSTNIG00000013811	cstf3	98	90.960	Tetraodon_nigroviridis
ENSPSIG00000009173	CSTF3	89	94.237	ENSTBEG00000001544	CSTF3	90	94.237	Tupaia_belangeri
ENSPSIG00000009173	CSTF3	100	94.150	ENSTTRG00000016366	CSTF3	100	94.150	Tursiops_truncatus
ENSPSIG00000009173	CSTF3	99	97.461	ENSUMAG00000018971	CSTF3	100	97.120	Ursus_maritimus
ENSPSIG00000009173	CSTF3	100	96.797	ENSVPAG00000007800	CSTF3	100	96.797	Vicugna_pacos
ENSPSIG00000009173	CSTF3	99	97.461	ENSVVUG00000014938	CSTF3	100	97.120	Vulpes_vulpes
ENSPSIG00000009173	CSTF3	88	80.000	ENSXETG00000021399	cstf3	100	81.230	Xenopus_tropicalis
ENSPSIG00000009173	CSTF3	66	43.685	ENSXETG00000017946	-	99	43.685	Xenopus_tropicalis
ENSPSIG00000009173	CSTF3	87	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSPSIG00000009173	CSTF3	100	90.808	ENSXMAG00000009545	cstf3	100	90.808	Xiphophorus_maculatus