EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000009247 (Gene tree)
Gene ID: 102461194
Gene Symbol: YBX3
Alias: -
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 34290 bases
Position: chrJH205660.1:412779-447068
Accession: 102461194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000010326	CSD	PF00313.22	2.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000010378	YBX3-201	728	XM_006112533	ENSPSIP00000010326	214 (aa)	-	K7FQL6

Gene Model

Click here to download ENSPSIG00000009247's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000009247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000009247	YBX3	95	100.000	ENSG00000060138	YBX3	92	96.471	Homo_sapiens
ENSPSIG00000009247	YBX3	90	100.000	ENSAMEG00000009393	YBX3	55	100.000	Ailuropoda_melanoleuca
ENSPSIG00000009247	YBX3	100	97.115	ENSAPLG00000003147	YBX3	76	97.115	Anas_platyrhynchos
ENSPSIG00000009247	YBX3	95	100.000	ENSANAG00000024492	-	67	99.038	Aotus_nancymaae
ENSPSIG00000009247	YBX3	100	59.459	ENSANAG00000033366	-	74	56.818	Aotus_nancymaae
ENSPSIG00000009247	YBX3	90	100.000	ENSBTAG00000009663	YBX3	56	90.385	Bos_taurus
ENSPSIG00000009247	YBX3	90	100.000	ENSCJAG00000021660	-	72	84.259	Callithrix_jacchus
ENSPSIG00000009247	YBX3	94	71.642	ENSCJAG00000033824	-	73	70.647	Callithrix_jacchus
ENSPSIG00000009247	YBX3	92	100.000	ENSCAFG00000013401	YBX3	99	86.512	Canis_familiaris
ENSPSIG00000009247	YBX3	93	89.011	ENSCAFG00020006412	YBX3	70	81.860	Canis_lupus_dingo
ENSPSIG00000009247	YBX3	90	100.000	ENSCHIG00000010863	YBX3	59	99.038	Capra_hircus
ENSPSIG00000009247	YBX3	100	75.463	ENSTSYG00000035821	-	72	73.611	Carlito_syrichta
ENSPSIG00000009247	YBX3	92	100.000	ENSTSYG00000004204	-	84	84.722	Carlito_syrichta
ENSPSIG00000009247	YBX3	92	100.000	ENSCAPG00000015039	YBX3	69	99.038	Cavia_aperea
ENSPSIG00000009247	YBX3	90	100.000	ENSCPOG00000011329	YBX3	80	85.116	Cavia_porcellus
ENSPSIG00000009247	YBX3	90	100.000	ENSCCAG00000016469	YBX3	57	99.038	Cebus_capucinus
ENSPSIG00000009247	YBX3	95	100.000	ENSCATG00000034411	YBX3	57	99.038	Cercocebus_atys
ENSPSIG00000009247	YBX3	92	100.000	ENSCLAG00000016030	YBX3	63	100.000	Chinchilla_lanigera
ENSPSIG00000009247	YBX3	95	100.000	ENSCSAG00000008744	YBX3	57	99.038	Chlorocebus_sabaeus
ENSPSIG00000009247	YBX3	99	94.313	ENSCPBG00000014147	YBX3	74	94.313	Chrysemys_picta_bellii
ENSPSIG00000009247	YBX3	95	100.000	ENSCANG00000036801	YBX3	88	84.722	Colobus_angolensis_palliatus
ENSPSIG00000009247	YBX3	100	84.186	ENSCGRG00001016148	Ybx3	73	84.186	Cricetulus_griseus_chok1gshd
ENSPSIG00000009247	YBX3	90	100.000	ENSDORG00000009103	Ybx3	59	99.038	Dipodomys_ordii
ENSPSIG00000009247	YBX3	91	100.000	ENSETEG00000002557	YBX3	74	99.029	Echinops_telfairi
ENSPSIG00000009247	YBX3	100	79.439	ENSEASG00005014726	YBX3	70	75.576	Equus_asinus_asinus
ENSPSIG00000009247	YBX3	100	82.326	ENSECAG00000013777	YBX3	71	82.326	Equus_caballus
ENSPSIG00000009247	YBX3	91	100.000	ENSEEUG00000010415	YBX3	74	99.029	Erinaceus_europaeus
ENSPSIG00000009247	YBX3	90	100.000	ENSFCAG00000027748	YBX3	57	99.038	Felis_catus
ENSPSIG00000009247	YBX3	100	60.870	ENSFALG00000003661	YBX3	79	96.154	Ficedula_albicollis
ENSPSIG00000009247	YBX3	90	100.000	ENSFDAG00000021192	YBX3	62	100.000	Fukomys_damarensis
ENSPSIG00000009247	YBX3	100	88.785	ENSGALG00000031890	YBX3	74	88.785	Gallus_gallus
ENSPSIG00000009247	YBX3	100	92.991	ENSGAGG00000017780	YBX3	74	92.991	Gopherus_agassizii
ENSPSIG00000009247	YBX3	95	100.000	ENSGGOG00000001352	YBX3	57	99.038	Gorilla_gorilla
ENSPSIG00000009247	YBX3	100	62.547	ENSHGLG00000014798	-	57	98.837	Heterocephalus_glaber_female
ENSPSIG00000009247	YBX3	90	75.879	ENSHGLG00000015495	-	72	76.650	Heterocephalus_glaber_female
ENSPSIG00000009247	YBX3	100	85.714	ENSHGLG00100003589	YBX3	86	85.185	Heterocephalus_glaber_male
ENSPSIG00000009247	YBX3	100	62.182	ENSSTOG00000032577	-	57	100.000	Ictidomys_tridecemlineatus
ENSPSIG00000009247	YBX3	100	56.410	ENSSTOG00000002108	-	55	99.038	Ictidomys_tridecemlineatus
ENSPSIG00000009247	YBX3	100	56.855	ENSJJAG00000014239	Ybx3	90	55.140	Jaculus_jaculus
ENSPSIG00000009247	YBX3	90	100.000	ENSLAFG00000017247	YBX3	57	99.038	Loxodonta_africana
ENSPSIG00000009247	YBX3	95	100.000	ENSMFAG00000039369	YBX3	57	99.038	Macaca_fascicularis
ENSPSIG00000009247	YBX3	95	100.000	ENSMMUG00000022469	YBX3	65	99.038	Macaca_mulatta
ENSPSIG00000009247	YBX3	90	100.000	ENSMNEG00000045109	YBX3	57	99.038	Macaca_nemestrina
ENSPSIG00000009247	YBX3	95	100.000	ENSMLEG00000033618	YBX3	76	84.651	Mandrillus_leucophaeus
ENSPSIG00000009247	YBX3	100	88.318	ENSMGAG00000014224	YBX3	99	88.318	Meleagris_gallopavo
ENSPSIG00000009247	YBX3	90	100.000	ENSMAUG00000012185	Ybx3	85	84.651	Mesocricetus_auratus
ENSPSIG00000009247	YBX3	100	74.766	ENSMICG00000031459	-	75	74.766	Microcebus_murinus
ENSPSIG00000009247	YBX3	90	100.000	ENSMICG00000038002	-	57	99.038	Microcebus_murinus
ENSPSIG00000009247	YBX3	100	84.651	ENSMOCG00000016291	Ybx3	91	84.651	Microtus_ochrogaster
ENSPSIG00000009247	YBX3	92	98.837	ENSMODG00000018248	YBX3	62	98.837	Monodelphis_domestica
ENSPSIG00000009247	YBX3	100	84.186	MGP_CAROLIEiJ_G0028947	Ybx3	73	84.186	Mus_caroli
ENSPSIG00000009247	YBX3	90	100.000	ENSMUSG00000030189	Ybx3	58	99.038	Mus_musculus
ENSPSIG00000009247	YBX3	100	84.651	MGP_PahariEiJ_G0022709	Ybx3	73	84.651	Mus_pahari
ENSPSIG00000009247	YBX3	100	84.186	MGP_SPRETEiJ_G0029994	Ybx3	73	84.186	Mus_spretus
ENSPSIG00000009247	YBX3	97	66.667	ENSMPUG00000011810	YBX3	50	74.074	Mustela_putorius_furo
ENSPSIG00000009247	YBX3	83	100.000	ENSMLUG00000007476	YBX3	73	98.810	Myotis_lucifugus
ENSPSIG00000009247	YBX3	99	79.070	ENSNGAG00000000710	Ybx3	88	79.070	Nannospalax_galili
ENSPSIG00000009247	YBX3	100	79.630	ENSNLEG00000034844	YBX3	76	78.704	Nomascus_leucogenys
ENSPSIG00000009247	YBX3	81	87.209	ENSODEG00000017957	YBX3	62	88.462	Octodon_degus
ENSPSIG00000009247	YBX3	88	91.026	ENSOCUG00000001889	YBX3	57	82.955	Oryctolagus_cuniculus
ENSPSIG00000009247	YBX3	93	98.913	ENSOGAG00000013245	YBX3	56	98.095	Otolemur_garnettii
ENSPSIG00000009247	YBX3	92	100.000	ENSOARG00000020919	YBX3	72	99.038	Ovis_aries
ENSPSIG00000009247	YBX3	92	100.000	ENSPPAG00000039068	YBX3	74	84.259	Pan_paniscus
ENSPSIG00000009247	YBX3	90	100.000	ENSPPRG00000005859	YBX3	71	85.185	Panthera_pardus
ENSPSIG00000009247	YBX3	90	100.000	ENSPTIG00000005322	YBX3	60	99.038	Panthera_tigris_altaica
ENSPSIG00000009247	YBX3	95	100.000	ENSPTRG00000004681	YBX3	57	99.038	Pan_troglodytes
ENSPSIG00000009247	YBX3	95	100.000	ENSPANG00000010280	YBX3	57	99.038	Papio_anubis
ENSPSIG00000009247	YBX3	100	85.581	ENSPEMG00000010391	-	81	85.581	Peromyscus_maniculatus_bairdii
ENSPSIG00000009247	YBX3	90	100.000	ENSPEMG00000012132	-	86	85.581	Peromyscus_maniculatus_bairdii
ENSPSIG00000009247	YBX3	88	54.724	ENSPCIG00000029949	YBX3	73	96.154	Phascolarctos_cinereus
ENSPSIG00000009247	YBX3	95	100.000	ENSPPYG00000004279	YBX3	57	99.038	Pongo_abelii
ENSPSIG00000009247	YBX3	100	85.116	ENSRNOG00000005480	Ybx3	73	85.116	Rattus_norvegicus
ENSPSIG00000009247	YBX3	95	100.000	ENSRBIG00000039208	YBX3	72	84.259	Rhinopithecus_bieti
ENSPSIG00000009247	YBX3	95	100.000	ENSRROG00000029638	YBX3	72	84.259	Rhinopithecus_roxellana
ENSPSIG00000009247	YBX3	92	100.000	ENSSBOG00000030573	YBX3	62	99.038	Saimiri_boliviensis_boliviensis
ENSPSIG00000009247	YBX3	90	98.837	ENSSHAG00000003262	YBX3	65	98.837	Sarcophilus_harrisii
ENSPSIG00000009247	YBX3	64	89.781	ENSSPUG00000009911	-	62	89.313	Sphenodon_punctatus
ENSPSIG00000009247	YBX3	90	100.000	ENSSSCG00000000633	YBX3	56	99.038	Sus_scrofa
ENSPSIG00000009247	YBX3	100	97.115	ENSTGUG00000012047	YBX3	75	97.115	Taeniopygia_guttata
ENSPSIG00000009247	YBX3	91	100.000	ENSTBEG00000012570	YBX3	58	99.029	Tupaia_belangeri
ENSPSIG00000009247	YBX3	82	100.000	ENSTTRG00000008045	YBX3	72	98.780	Tursiops_truncatus
ENSPSIG00000009247	YBX3	88	88.608	ENSUAMG00000016662	YBX3	74	88.660	Ursus_americanus
ENSPSIG00000009247	YBX3	92	100.000	ENSUMAG00000016118	YBX3	70	98.077	Ursus_maritimus
ENSPSIG00000009247	YBX3	88	100.000	ENSVPAG00000000876	YBX3	60	100.000	Vicugna_pacos
ENSPSIG00000009247	YBX3	91	88.095	ENSVVUG00000004956	YBX3	73	88.660	Vulpes_vulpes
ENSPSIG00000009247	YBX3	99	75.463	ENSXETG00000016239	ybx3	87	74.537	Xenopus_tropicalis