EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000009367 (Gene tree)
Gene ID: 102457986
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 49899 bases
Position: chrJH204952.1:181897-231795
Accession: 102457986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000010501	RRM_5	PF13893.6	1.9e-07	1	1
ENSPSIP00000010501	RRM_1	PF00076.22	7.9e-14	1	1
ENSPSIP00000010501	SAP	PF02037.27	8.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000010554	-	3450	XM_006110510	ENSPSIP00000010501	938 (aa)	-	K7FR41

Gene Model

Click here to download ENSPSIG00000009367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000009367's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000009367	-	80	36.520	ENSPSIG00000005489	SLTM	75	35.476
ENSPSIG00000009367	-	100	77.239	ENSPSIG00000011679	-	100	78.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000009367	-	97	61.255	ENSG00000160633	SAFB	99	61.684	Homo_sapiens
ENSPSIG00000009367	-	91	47.279	ENSAPOG00000022508	safb	99	46.602	Acanthochromis_polyacanthus
ENSPSIG00000009367	-	67	59.113	ENSAMEG00000012254	SAFB	99	60.824	Ailuropoda_melanoleuca
ENSPSIG00000009367	-	91	45.896	ENSACIG00000006247	safb	99	43.804	Amphilophus_citrinellus
ENSPSIG00000009367	-	91	46.652	ENSAOCG00000006308	safb	98	46.765	Amphiprion_ocellaris
ENSPSIG00000009367	-	91	46.886	ENSAPEG00000023342	safb	99	46.170	Amphiprion_percula
ENSPSIG00000009367	-	96	45.582	ENSATEG00000004998	safb	99	46.079	Anabas_testudineus
ENSPSIG00000009367	-	90	72.268	ENSAPLG00000006355	-	100	72.738	Anas_platyrhynchos
ENSPSIG00000009367	-	94	83.201	ENSAPLG00000005780	-	100	83.541	Anas_platyrhynchos
ENSPSIG00000009367	-	79	53.765	ENSACAG00000016893	-	96	53.034	Anolis_carolinensis
ENSPSIG00000009367	-	97	60.022	ENSANAG00000028821	SAFB	99	61.684	Aotus_nancymaae
ENSPSIG00000009367	-	96	46.221	ENSACLG00000001926	safb	98	46.046	Astatotilapia_calliptera
ENSPSIG00000009367	-	92	47.086	ENSAMXG00000018154	safb	98	46.838	Astyanax_mexicanus
ENSPSIG00000009367	-	97	61.848	ENSBTAG00000007875	SAFB	99	60.952	Bos_taurus
ENSPSIG00000009367	-	81	66.489	ENSCJAG00000017081	SAFB	99	64.779	Callithrix_jacchus
ENSPSIG00000009367	-	64	61.020	ENSCAFG00000018803	SAFB	87	62.526	Canis_familiaris
ENSPSIG00000009367	-	64	61.020	ENSCAFG00020018943	SAFB	99	62.526	Canis_lupus_dingo
ENSPSIG00000009367	-	97	61.589	ENSCHIG00000007262	SAFB	98	64.789	Capra_hircus
ENSPSIG00000009367	-	60	53.180	ENSTSYG00000001851	-	100	52.297	Carlito_syrichta
ENSPSIG00000009367	-	81	63.819	ENSCAPG00000012121	SAFB	100	63.819	Cavia_aperea
ENSPSIG00000009367	-	63	56.019	ENSCPOG00000026322	SAFB	99	59.609	Cavia_porcellus
ENSPSIG00000009367	-	97	61.430	ENSCCAG00000020193	SAFB	99	61.684	Cebus_capucinus
ENSPSIG00000009367	-	80	58.747	ENSCATG00000029994	SAFB	99	61.579	Cercocebus_atys
ENSPSIG00000009367	-	64	60.099	ENSCSAG00000009949	SAFB	99	61.579	Chlorocebus_sabaeus
ENSPSIG00000009367	-	92	90.520	ENSCPBG00000010928	-	100	90.867	Chrysemys_picta_bellii
ENSPSIG00000009367	-	92	73.855	ENSCPBG00000010936	-	100	74.413	Chrysemys_picta_bellii
ENSPSIG00000009367	-	97	57.019	ENSCANG00000019754	-	99	58.508	Colobus_angolensis_palliatus
ENSPSIG00000009367	-	86	63.725	ENSCANG00000004774	-	99	65.854	Colobus_angolensis_palliatus
ENSPSIG00000009367	-	64	56.000	ENSCGRG00001002254	Safb	99	57.610	Cricetulus_griseus_chok1gshd
ENSPSIG00000009367	-	56	51.546	ENSCGRG00000011529	Safb	97	55.422	Cricetulus_griseus_crigri
ENSPSIG00000009367	-	94	42.632	ENSCSEG00000019870	safb	99	41.830	Cynoglossus_semilaevis
ENSPSIG00000009367	-	94	43.164	ENSCVAG00000002226	safb	98	42.716	Cyprinodon_variegatus
ENSPSIG00000009367	-	91	45.701	ENSDARG00000020467	safb	99	44.828	Danio_rerio
ENSPSIG00000009367	-	72	58.892	ENSDNOG00000015746	SAFB	95	61.022	Dasypus_novemcinctus
ENSPSIG00000009367	-	64	57.327	ENSDORG00000016200	Safb	99	57.098	Dipodomys_ordii
ENSPSIG00000009367	-	80	55.556	ENSETEG00000018679	SAFB	88	58.333	Echinops_telfairi
ENSPSIG00000009367	-	64	58.251	ENSEASG00005023019	SAFB	99	60.105	Equus_asinus_asinus
ENSPSIG00000009367	-	64	58.872	ENSECAG00000018659	SAFB	89	60.526	Equus_caballus
ENSPSIG00000009367	-	96	45.297	ENSELUG00000022327	safb	99	45.885	Esox_lucius
ENSPSIG00000009367	-	64	61.020	ENSFCAG00000011835	SAFB	99	62.000	Felis_catus
ENSPSIG00000009367	-	91	67.077	ENSFALG00000013881	-	99	68.468	Ficedula_albicollis
ENSPSIG00000009367	-	100	81.847	ENSFALG00000013882	-	92	82.166	Ficedula_albicollis
ENSPSIG00000009367	-	86	62.814	ENSFDAG00000020306	SAFB	99	62.814	Fukomys_damarensis
ENSPSIG00000009367	-	64	47.273	ENSFHEG00000004219	safb	99	42.950	Fundulus_heteroclitus
ENSPSIG00000009367	-	96	41.845	ENSGMOG00000014280	safb	98	43.223	Gadus_morhua
ENSPSIG00000009367	-	100	82.234	ENSGALG00000013365	-	100	82.553	Gallus_gallus
ENSPSIG00000009367	-	100	69.887	ENSGALG00000001948	-	100	71.120	Gallus_gallus
ENSPSIG00000009367	-	94	42.002	ENSGAFG00000016162	safb	98	41.834	Gambusia_affinis
ENSPSIG00000009367	-	97	44.904	ENSGACG00000011385	safb	99	44.952	Gasterosteus_aculeatus
ENSPSIG00000009367	-	73	83.819	ENSGAGG00000017702	-	100	84.257	Gopherus_agassizii
ENSPSIG00000009367	-	96	75.780	ENSGAGG00000008424	-	100	76.319	Gopherus_agassizii
ENSPSIG00000009367	-	97	60.390	ENSGGOG00000015109	SAFB	99	61.684	Gorilla_gorilla
ENSPSIG00000009367	-	96	42.982	ENSHBUG00000009218	safb	98	42.562	Haplochromis_burtoni
ENSPSIG00000009367	-	63	58.604	ENSHGLG00000015883	SAFB	99	60.725	Heterocephalus_glaber_female
ENSPSIG00000009367	-	85	65.865	ENSHGLG00100004228	SAFB	76	57.991	Heterocephalus_glaber_male
ENSPSIG00000009367	-	92	40.586	ENSHCOG00000001705	safb	99	43.311	Hippocampus_comes
ENSPSIG00000009367	-	61	55.652	ENSIPUG00000024869	safb2	99	48.335	Ictalurus_punctatus
ENSPSIG00000009367	-	59	57.785	ENSSTOG00000002783	SAFB	100	60.200	Ictidomys_tridecemlineatus
ENSPSIG00000009367	-	66	56.037	ENSJJAG00000009021	Safb	99	59.175	Jaculus_jaculus
ENSPSIG00000009367	-	91	46.075	ENSKMAG00000022308	safb	98	45.671	Kryptolebias_marmoratus
ENSPSIG00000009367	-	96	46.292	ENSLBEG00000006015	safb	98	46.455	Labrus_bergylta
ENSPSIG00000009367	-	63	54.927	ENSLACG00000018090	SAFB	99	55.212	Latimeria_chalumnae
ENSPSIG00000009367	-	97	50.267	ENSLOCG00000003613	safb	99	50.376	Lepisosteus_oculatus
ENSPSIG00000009367	-	97	60.734	ENSLAFG00000003840	SAFB	99	62.196	Loxodonta_africana
ENSPSIG00000009367	-	97	61.039	ENSMFAG00000003885	SAFB	99	61.684	Macaca_fascicularis
ENSPSIG00000009367	-	97	60.606	ENSMMUG00000017970	SAFB	99	61.579	Macaca_mulatta
ENSPSIG00000009367	-	97	58.855	ENSMNEG00000035637	SAFB	99	59.559	Macaca_nemestrina
ENSPSIG00000009367	-	60	56.993	ENSMLEG00000038637	SAFB	99	58.061	Mandrillus_leucophaeus
ENSPSIG00000009367	-	97	45.838	ENSMAMG00000003357	safb	91	45.741	Mastacembelus_armatus
ENSPSIG00000009367	-	96	46.221	ENSMZEG00005009120	safb	99	46.154	Maylandia_zebra
ENSPSIG00000009367	-	97	80.132	ENSMGAG00000001101	-	100	80.461	Meleagris_gallopavo
ENSPSIG00000009367	-	89	64.947	ENSMGAG00000001051	-	99	66.471	Meleagris_gallopavo
ENSPSIG00000009367	-	67	58.740	ENSMICG00000008739	-	99	61.012	Microcebus_murinus
ENSPSIG00000009367	-	85	54.342	ENSMICG00000046795	-	94	61.538	Microcebus_murinus
ENSPSIG00000009367	-	63	55.878	ENSMOCG00000014040	Safb	99	58.187	Microtus_ochrogaster
ENSPSIG00000009367	-	100	63.958	ENSMODG00000001236	SAFB	100	65.236	Monodelphis_domestica
ENSPSIG00000009367	-	96	45.838	ENSMALG00000020330	safb	99	46.452	Monopterus_albus
ENSPSIG00000009367	-	63	55.627	MGP_CAROLIEiJ_G0021780	Safb	99	58.230	Mus_caroli
ENSPSIG00000009367	-	63	55.627	ENSMUSG00000071054	Safb	99	58.230	Mus_musculus
ENSPSIG00000009367	-	63	55.502	MGP_PahariEiJ_G0020769	Safb	99	58.273	Mus_pahari
ENSPSIG00000009367	-	67	59.306	ENSMPUG00000006123	SAFB	94	62.105	Mustela_putorius_furo
ENSPSIG00000009367	-	97	63.027	ENSMLUG00000001081	SAFB	99	62.355	Myotis_lucifugus
ENSPSIG00000009367	-	63	54.041	ENSNGAG00000019882	Safb	99	57.785	Nannospalax_galili
ENSPSIG00000009367	-	93	61.538	ENSNLEG00000013551	SAFB	99	62.156	Nomascus_leucogenys
ENSPSIG00000009367	-	59	55.793	ENSOPRG00000011561	-	100	58.698	Ochotona_princeps
ENSPSIG00000009367	-	63	58.900	ENSODEG00000014838	SAFB	99	60.950	Octodon_degus
ENSPSIG00000009367	-	96	46.120	ENSONIG00000002318	safb	99	46.220	Oreochromis_niloticus
ENSPSIG00000009367	-	90	54.907	ENSOCUG00000014628	SAFB	99	54.737	Oryctolagus_cuniculus
ENSPSIG00000009367	-	91	45.195	ENSORLG00000016989	safb	98	44.184	Oryzias_latipes
ENSPSIG00000009367	-	94	43.679	ENSORLG00020000404	safb	98	41.309	Oryzias_latipes_hni
ENSPSIG00000009367	-	94	44.912	ENSORLG00015010733	safb	98	44.637	Oryzias_latipes_hsok
ENSPSIG00000009367	-	96	45.374	ENSOMEG00000009066	safb	98	44.115	Oryzias_melastigma
ENSPSIG00000009367	-	66	58.320	ENSOGAG00000027769	SAFB	99	60.423	Otolemur_garnettii
ENSPSIG00000009367	-	79	57.181	ENSOARG00000007856	-	100	55.020	Ovis_aries
ENSPSIG00000009367	-	97	59.022	ENSOARG00000007662	-	99	56.490	Ovis_aries
ENSPSIG00000009367	-	97	61.364	ENSPPAG00000035129	SAFB	99	61.935	Pan_paniscus
ENSPSIG00000009367	-	64	61.020	ENSPPRG00000017197	SAFB	99	62.000	Panthera_pardus
ENSPSIG00000009367	-	97	61.364	ENSPTRG00000010335	SAFB	99	61.935	Pan_troglodytes
ENSPSIG00000009367	-	97	60.498	ENSPANG00000007770	SAFB	99	61.684	Papio_anubis
ENSPSIG00000009367	-	98	46.901	ENSPKIG00000009902	safb	99	47.893	Paramormyrops_kingsleyae
ENSPSIG00000009367	-	63	55.897	ENSPEMG00000020428	Safb	99	58.204	Peromyscus_maniculatus_bairdii
ENSPSIG00000009367	-	60	62.478	ENSPCIG00000009504	-	99	65.774	Phascolarctos_cinereus
ENSPSIG00000009367	-	94	43.575	ENSPFOG00000007745	safb	99	44.005	Poecilia_formosa
ENSPSIG00000009367	-	94	41.353	ENSPLAG00000001614	safb	98	42.171	Poecilia_latipinna
ENSPSIG00000009367	-	94	43.352	ENSPMEG00000021023	safb	99	43.630	Poecilia_mexicana
ENSPSIG00000009367	-	94	43.077	ENSPREG00000012496	safb	98	42.887	Poecilia_reticulata
ENSPSIG00000009367	-	64	60.263	ENSPPYG00000009428	SAFB	99	61.474	Pongo_abelii
ENSPSIG00000009367	-	99	57.338	ENSPCAG00000006475	SAFB	99	59.077	Procavia_capensis
ENSPSIG00000009367	-	99	57.660	ENSPCOG00000014090	SAFB	99	57.761	Propithecus_coquereli
ENSPSIG00000009367	-	97	56.663	ENSPVAG00000004913	SAFB	99	57.053	Pteropus_vampyrus
ENSPSIG00000009367	-	96	46.489	ENSPNAG00000021838	safb	99	47.849	Pygocentrus_nattereri
ENSPSIG00000009367	-	63	55.377	ENSRNOG00000050543	Safb	99	57.965	Rattus_norvegicus
ENSPSIG00000009367	-	93	61.538	ENSRBIG00000042509	SAFB	99	58.156	Rhinopithecus_bieti
ENSPSIG00000009367	-	97	61.147	ENSRROG00000029278	SAFB	99	61.789	Rhinopithecus_roxellana
ENSPSIG00000009367	-	97	60.888	ENSSBOG00000026291	SAFB	99	61.579	Saimiri_boliviensis_boliviensis
ENSPSIG00000009367	-	95	49.413	ENSSFOG00015008156	safb	97	49.787	Scleropages_formosus
ENSPSIG00000009367	-	96	45.601	ENSSMAG00000009316	safb	98	45.659	Scophthalmus_maximus
ENSPSIG00000009367	-	96	45.168	ENSSDUG00000009652	safb	98	45.307	Seriola_dumerili
ENSPSIG00000009367	-	96	45.981	ENSSLDG00000001670	safb	99	45.793	Seriola_lalandi_dorsalis
ENSPSIG00000009367	-	60	57.848	ENSSARG00000010475	SAFB	100	58.850	Sorex_araneus
ENSPSIG00000009367	-	52	70.428	ENSSPUG00000009820	-	98	70.588	Sphenodon_punctatus
ENSPSIG00000009367	-	96	43.157	ENSSPAG00000015682	safb	99	43.559	Stegastes_partitus
ENSPSIG00000009367	-	97	60.493	ENSSSCG00000013522	SAFB	99	62.423	Sus_scrofa
ENSPSIG00000009367	-	96	79.185	ENSTGUG00000000502	-	100	79.515	Taeniopygia_guttata
ENSPSIG00000009367	-	94	72.336	ENSTGUG00000000489	-	100	72.480	Taeniopygia_guttata
ENSPSIG00000009367	-	93	46.473	ENSTRUG00000003567	safb	99	45.588	Takifugu_rubripes
ENSPSIG00000009367	-	89	45.183	ENSTNIG00000015470	safb	100	44.785	Tetraodon_nigroviridis
ENSPSIG00000009367	-	89	86.111	ENSTTRG00000013588	SAFB	92	66.129	Tursiops_truncatus
ENSPSIG00000009367	-	84	59.396	ENSUMAG00000009734	SAFB	99	59.084	Ursus_maritimus
ENSPSIG00000009367	-	72	63.303	ENSVPAG00000012043	SAFB	79	63.989	Vicugna_pacos
ENSPSIG00000009367	-	64	61.020	ENSVVUG00000013720	SAFB	87	62.526	Vulpes_vulpes
ENSPSIG00000009367	-	66	49.365	ENSXETG00000008755	safb	99	51.254	Xenopus_tropicalis
ENSPSIG00000009367	-	96	43.027	ENSXMAG00000003458	safb	98	43.459	Xiphophorus_maculatus