EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000009558 (Gene tree)
Gene ID: 102460969
Gene Symbol: NCBP1
Alias: -
Full Name: nuclear cap-binding protein subunit 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 35873 bases
Position: chrJH206533.1:13094-48966
Accession: 102460969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000010536	MIF4G_like	PF09088.11	1.8e-36	1	1
ENSPSIP00000010536	MIF4G_like_2	PF09090.11	1.8e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000010589	NCBP1-201	2128	XM_006114830	ENSPSIP00000010536	512 (aa)	XP_025036339	K7FR76

Gene Model

Click here to download ENSPSIG00000009558's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03013	RNA transport	KEGG
pss03015	mRNA surveillance pathway	KEGG
pss03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000009558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000009558	NCBP1	100	89.648	ENSG00000136937	NCBP1	77	79.839	Homo_sapiens
ENSPSIG00000009558	NCBP1	99	83.398	ENSAPOG00000008002	NCBP1	64	82.387	Acanthochromis_polyacanthus
ENSPSIG00000009558	NCBP1	100	89.648	ENSAMEG00000004763	NCBP1	64	89.453	Ailuropoda_melanoleuca
ENSPSIG00000009558	NCBP1	99	83.170	ENSACIG00000000274	NCBP1	64	82.617	Amphilophus_citrinellus
ENSPSIG00000009558	NCBP1	99	83.398	ENSAOCG00000021148	NCBP1	64	82.387	Amphiprion_ocellaris
ENSPSIG00000009558	NCBP1	99	83.398	ENSAPEG00000001701	NCBP1	64	82.387	Amphiprion_percula
ENSPSIG00000009558	NCBP1	99	83.203	ENSATEG00000006929	NCBP1	64	82.192	Anabas_testudineus
ENSPSIG00000009558	NCBP1	100	94.951	ENSAPLG00000016318	NCBP1	68	94.369	Anas_platyrhynchos
ENSPSIG00000009558	NCBP1	100	92.085	ENSACAG00000004409	NCBP1	56	92.278	Anolis_carolinensis
ENSPSIG00000009558	NCBP1	100	89.648	ENSANAG00000025744	NCBP1	70	89.453	Aotus_nancymaae
ENSPSIG00000009558	NCBP1	99	82.812	ENSACLG00000014812	NCBP1	70	81.641	Astatotilapia_calliptera
ENSPSIG00000009558	NCBP1	99	81.676	ENSAMXG00000016364	NCBP1	64	81.676	Astyanax_mexicanus
ENSPSIG00000009558	NCBP1	100	89.453	ENSBTAG00000009732	NCBP1	64	89.258	Bos_taurus
ENSPSIG00000009558	NCBP1	100	89.844	ENSCJAG00000010840	NCBP1	70	89.648	Callithrix_jacchus
ENSPSIG00000009558	NCBP1	100	89.648	ENSCAFG00000002445	NCBP1	64	89.453	Canis_familiaris
ENSPSIG00000009558	NCBP1	100	89.648	ENSCAFG00020017997	NCBP1	74	89.453	Canis_lupus_dingo
ENSPSIG00000009558	NCBP1	100	89.062	ENSCHIG00000020139	NCBP1	64	88.867	Capra_hircus
ENSPSIG00000009558	NCBP1	85	75.973	ENSCAPG00000014252	NCBP1	59	75.744	Cavia_aperea
ENSPSIG00000009558	NCBP1	100	89.844	ENSCPOG00000012573	NCBP1	66	89.648	Cavia_porcellus
ENSPSIG00000009558	NCBP1	100	89.648	ENSCCAG00000032297	NCBP1	64	89.453	Cebus_capucinus
ENSPSIG00000009558	NCBP1	100	89.648	ENSCATG00000010052	NCBP1	72	89.453	Cercocebus_atys
ENSPSIG00000009558	NCBP1	100	89.844	ENSCLAG00000014339	NCBP1	64	89.648	Chinchilla_lanigera
ENSPSIG00000009558	NCBP1	100	89.648	ENSCSAG00000010929	NCBP1	64	89.453	Chlorocebus_sabaeus
ENSPSIG00000009558	NCBP1	83	89.720	ENSCHOG00000010332	NCBP1	54	90.476	Choloepus_hoffmanni
ENSPSIG00000009558	NCBP1	100	98.438	ENSCPBG00000024344	NCBP1	70	98.438	Chrysemys_picta_bellii
ENSPSIG00000009558	NCBP1	99	53.010	ENSCING00000008990	-	64	52.621	Ciona_intestinalis
ENSPSIG00000009558	NCBP1	99	52.015	ENSCSAVG00000005300	-	99	53.608	Ciona_savignyi
ENSPSIG00000009558	NCBP1	100	89.648	ENSCANG00000036913	NCBP1	70	89.453	Colobus_angolensis_palliatus
ENSPSIG00000009558	NCBP1	100	88.477	ENSCGRG00001015771	Ncbp1	64	88.281	Cricetulus_griseus_chok1gshd
ENSPSIG00000009558	NCBP1	100	88.477	ENSCGRG00000010311	Ncbp1	65	88.281	Cricetulus_griseus_crigri
ENSPSIG00000009558	NCBP1	99	83.203	ENSCSEG00000012377	NCBP1	70	81.996	Cynoglossus_semilaevis
ENSPSIG00000009558	NCBP1	99	80.078	ENSCVAG00000008795	NCBP1	64	81.250	Cyprinodon_variegatus
ENSPSIG00000009558	NCBP1	100	88.281	ENSDNOG00000006885	NCBP1	74	88.086	Dasypus_novemcinctus
ENSPSIG00000009558	NCBP1	100	88.672	ENSDORG00000013652	Ncbp1	65	88.477	Dipodomys_ordii
ENSPSIG00000009558	NCBP1	100	56.615	FBgn0022942	Cbp80	64	56.420	Drosophila_melanogaster
ENSPSIG00000009558	NCBP1	90	84.665	ENSETEG00000009705	NCBP1	58	84.233	Echinops_telfairi
ENSPSIG00000009558	NCBP1	100	72.070	ENSEBUG00000008386	NCBP1	64	71.680	Eptatretus_burgeri
ENSPSIG00000009558	NCBP1	100	88.867	ENSEASG00005022795	NCBP1	64	88.672	Equus_asinus_asinus
ENSPSIG00000009558	NCBP1	100	89.062	ENSECAG00000013847	NCBP1	64	88.867	Equus_caballus
ENSPSIG00000009558	NCBP1	93	83.158	ENSEEUG00000015973	NCBP1	63	82.947	Erinaceus_europaeus
ENSPSIG00000009558	NCBP1	99	80.273	ENSELUG00000022519	NCBP1	67	81.445	Esox_lucius
ENSPSIG00000009558	NCBP1	100	89.453	ENSFCAG00000001206	NCBP1	64	89.258	Felis_catus
ENSPSIG00000009558	NCBP1	100	95.146	ENSFALG00000001193	NCBP1	66	95.146	Ficedula_albicollis
ENSPSIG00000009558	NCBP1	100	89.648	ENSFDAG00000010864	NCBP1	65	89.453	Fukomys_damarensis
ENSPSIG00000009558	NCBP1	99	81.445	ENSFHEG00000000655	NCBP1	64	81.445	Fundulus_heteroclitus
ENSPSIG00000009558	NCBP1	99	80.507	ENSGMOG00000008653	NCBP1	64	80.078	Gadus_morhua
ENSPSIG00000009558	NCBP1	100	95.117	ENSGALG00000002087	NCBP1	64	94.531	Gallus_gallus
ENSPSIG00000009558	NCBP1	99	82.617	ENSGAFG00000017787	NCBP1	64	82.617	Gambusia_affinis
ENSPSIG00000009558	NCBP1	99	80.702	ENSGACG00000016772	NCBP1	63	79.922	Gasterosteus_aculeatus
ENSPSIG00000009558	NCBP1	100	97.852	ENSGAGG00000019483	NCBP1	70	97.852	Gopherus_agassizii
ENSPSIG00000009558	NCBP1	100	89.648	ENSGGOG00000001376	NCBP1	70	89.453	Gorilla_gorilla
ENSPSIG00000009558	NCBP1	99	82.812	ENSHBUG00000020843	NCBP1	64	81.800	Haplochromis_burtoni
ENSPSIG00000009558	NCBP1	100	89.844	ENSHGLG00000001882	NCBP1	64	89.648	Heterocephalus_glaber_female
ENSPSIG00000009558	NCBP1	100	83.203	ENSHGLG00000018112	-	64	82.812	Heterocephalus_glaber_female
ENSPSIG00000009558	NCBP1	100	83.203	ENSHGLG00100017373	-	64	82.812	Heterocephalus_glaber_male
ENSPSIG00000009558	NCBP1	100	89.844	ENSHGLG00100013014	NCBP1	64	89.648	Heterocephalus_glaber_male
ENSPSIG00000009558	NCBP1	99	75.781	ENSHCOG00000000204	NCBP1	75	75.781	Hippocampus_comes
ENSPSIG00000009558	NCBP1	99	82.031	ENSIPUG00000007275	ncbp1	64	82.031	Ictalurus_punctatus
ENSPSIG00000009558	NCBP1	100	90.039	ENSSTOG00000002695	NCBP1	64	89.844	Ictidomys_tridecemlineatus
ENSPSIG00000009558	NCBP1	99	81.836	ENSKMAG00000003594	NCBP1	64	80.822	Kryptolebias_marmoratus
ENSPSIG00000009558	NCBP1	99	80.497	ENSLBEG00000011661	NCBP1	65	79.502	Labrus_bergylta
ENSPSIG00000009558	NCBP1	100	78.613	ENSLACG00000013955	NCBP1	65	77.586	Latimeria_chalumnae
ENSPSIG00000009558	NCBP1	99	84.211	ENSLOCG00000009579	NCBP1	64	83.821	Lepisosteus_oculatus
ENSPSIG00000009558	NCBP1	100	89.062	ENSLAFG00000005999	NCBP1	64	88.867	Loxodonta_africana
ENSPSIG00000009558	NCBP1	100	89.648	ENSMFAG00000030994	NCBP1	72	89.453	Macaca_fascicularis
ENSPSIG00000009558	NCBP1	100	89.648	ENSMMUG00000012281	NCBP1	72	89.453	Macaca_mulatta
ENSPSIG00000009558	NCBP1	100	89.648	ENSMNEG00000042790	NCBP1	64	89.453	Macaca_nemestrina
ENSPSIG00000009558	NCBP1	100	89.648	ENSMLEG00000030374	NCBP1	70	89.453	Mandrillus_leucophaeus
ENSPSIG00000009558	NCBP1	99	82.812	ENSMAMG00000014806	NCBP1	65	81.800	Mastacembelus_armatus
ENSPSIG00000009558	NCBP1	99	80.822	ENSMZEG00005009290	-	66	80.859	Maylandia_zebra
ENSPSIG00000009558	NCBP1	99	82.812	ENSMZEG00005003469	NCBP1	64	81.800	Maylandia_zebra
ENSPSIG00000009558	NCBP1	54	90.146	ENSMGAG00000008720	NCBP1	100	89.416	Meleagris_gallopavo
ENSPSIG00000009558	NCBP1	100	88.477	ENSMAUG00000020583	Ncbp1	64	88.281	Mesocricetus_auratus
ENSPSIG00000009558	NCBP1	100	89.062	ENSMICG00000012682	NCBP1	64	88.867	Microcebus_murinus
ENSPSIG00000009558	NCBP1	100	88.477	ENSMOCG00000015818	Ncbp1	64	88.281	Microtus_ochrogaster
ENSPSIG00000009558	NCBP1	99	80.822	ENSMMOG00000002610	NCBP1	71	80.859	Mola_mola
ENSPSIG00000009558	NCBP1	100	89.453	ENSMODG00000003202	NCBP1	63	89.258	Monodelphis_domestica
ENSPSIG00000009558	NCBP1	99	81.641	ENSMALG00000003547	NCBP1	64	80.664	Monopterus_albus
ENSPSIG00000009558	NCBP1	100	88.086	MGP_CAROLIEiJ_G0025982	Ncbp1	64	87.891	Mus_caroli
ENSPSIG00000009558	NCBP1	100	88.086	ENSMUSG00000028330	Ncbp1	64	87.891	Mus_musculus
ENSPSIG00000009558	NCBP1	100	88.477	MGP_PahariEiJ_G0028318	Ncbp1	64	88.281	Mus_pahari
ENSPSIG00000009558	NCBP1	100	88.086	MGP_SPRETEiJ_G0026945	Ncbp1	64	87.891	Mus_spretus
ENSPSIG00000009558	NCBP1	100	89.453	ENSMPUG00000006399	NCBP1	64	89.258	Mustela_putorius_furo
ENSPSIG00000009558	NCBP1	100	88.086	ENSMLUG00000015201	NCBP1	65	87.891	Myotis_lucifugus
ENSPSIG00000009558	NCBP1	100	88.672	ENSNGAG00000014101	Ncbp1	64	88.281	Nannospalax_galili
ENSPSIG00000009558	NCBP1	76	71.139	ENSNBRG00000014674	NCBP1	63	69.797	Neolamprologus_brichardi
ENSPSIG00000009558	NCBP1	100	89.648	ENSNLEG00000016909	NCBP1	72	89.453	Nomascus_leucogenys
ENSPSIG00000009558	NCBP1	85	88.546	ENSMEUG00000010672	NCBP1	55	86.784	Notamacropus_eugenii
ENSPSIG00000009558	NCBP1	93	81.474	ENSOPRG00000002144	-	62	81.474	Ochotona_princeps
ENSPSIG00000009558	NCBP1	100	89.648	ENSODEG00000003232	NCBP1	65	89.453	Octodon_degus
ENSPSIG00000009558	NCBP1	99	82.617	ENSONIG00000001502	NCBP1	64	81.605	Oreochromis_niloticus
ENSPSIG00000009558	NCBP1	69	92.593	ENSOANG00000001918	NCBP1	56	92.593	Ornithorhynchus_anatinus
ENSPSIG00000009558	NCBP1	97	89.293	ENSOCUG00000013853	NCBP1	61	89.091	Oryctolagus_cuniculus
ENSPSIG00000009558	NCBP1	99	80.233	ENSORLG00000011008	NCBP1	71	80.431	Oryzias_latipes
ENSPSIG00000009558	NCBP1	99	80.426	ENSORLG00020017455	NCBP1	71	74.472	Oryzias_latipes_hni
ENSPSIG00000009558	NCBP1	99	80.426	ENSORLG00015012127	NCBP1	64	79.612	Oryzias_latipes_hsok
ENSPSIG00000009558	NCBP1	99	81.202	ENSOMEG00000020698	NCBP1	64	80.583	Oryzias_melastigma
ENSPSIG00000009558	NCBP1	100	89.648	ENSOGAG00000013888	NCBP1	64	89.453	Otolemur_garnettii
ENSPSIG00000009558	NCBP1	100	89.062	ENSOARG00000011233	NCBP1	64	88.867	Ovis_aries
ENSPSIG00000009558	NCBP1	100	89.648	ENSPPAG00000026462	NCBP1	70	89.453	Pan_paniscus
ENSPSIG00000009558	NCBP1	100	89.648	ENSPPRG00000022574	NCBP1	64	89.453	Panthera_pardus
ENSPSIG00000009558	NCBP1	100	89.648	ENSPTIG00000018507	NCBP1	64	89.453	Panthera_tigris_altaica
ENSPSIG00000009558	NCBP1	100	89.648	ENSPTRG00000021167	NCBP1	64	89.453	Pan_troglodytes
ENSPSIG00000009558	NCBP1	100	89.648	ENSPANG00000025591	NCBP1	72	89.453	Papio_anubis
ENSPSIG00000009558	NCBP1	100	80.078	ENSPKIG00000015861	NCBP1	67	80.078	Paramormyrops_kingsleyae
ENSPSIG00000009558	NCBP1	99	75.875	ENSPMGG00000020476	NCBP1	64	75.728	Periophthalmus_magnuspinnatus
ENSPSIG00000009558	NCBP1	100	88.086	ENSPEMG00000020105	Ncbp1	64	87.891	Peromyscus_maniculatus_bairdii
ENSPSIG00000009558	NCBP1	99	62.548	ENSPMAG00000005533	NCBP1	64	61.390	Petromyzon_marinus
ENSPSIG00000009558	NCBP1	100	89.258	ENSPCIG00000015800	NCBP1	68	88.732	Phascolarctos_cinereus
ENSPSIG00000009558	NCBP1	99	81.942	ENSPFOG00000004158	NCBP1	64	81.553	Poecilia_formosa
ENSPSIG00000009558	NCBP1	99	82.617	ENSPLAG00000020002	NCBP1	64	82.617	Poecilia_latipinna
ENSPSIG00000009558	NCBP1	99	82.422	ENSPMEG00000019821	NCBP1	64	82.422	Poecilia_mexicana
ENSPSIG00000009558	NCBP1	99	82.261	ENSPREG00000006035	NCBP1	64	81.676	Poecilia_reticulata
ENSPSIG00000009558	NCBP1	100	89.648	ENSPPYG00000019426	NCBP1	64	89.453	Pongo_abelii
ENSPSIG00000009558	NCBP1	84	100.000	ENSPCAG00000009943	NCBP1	54	100.000	Procavia_capensis
ENSPSIG00000009558	NCBP1	97	88.934	ENSPCOG00000020024	NCBP1	75	88.732	Propithecus_coquereli
ENSPSIG00000009558	NCBP1	100	89.258	ENSPVAG00000005924	NCBP1	64	89.062	Pteropus_vampyrus
ENSPSIG00000009558	NCBP1	99	81.605	ENSPNYG00000002140	NCBP1	70	81.641	Pundamilia_nyererei
ENSPSIG00000009558	NCBP1	99	82.192	ENSPNAG00000027753	NCBP1	70	82.031	Pygocentrus_nattereri
ENSPSIG00000009558	NCBP1	100	88.281	ENSRNOG00000023605	Ncbp1	64	88.086	Rattus_norvegicus
ENSPSIG00000009558	NCBP1	100	89.648	ENSRBIG00000043175	NCBP1	72	89.453	Rhinopithecus_bieti
ENSPSIG00000009558	NCBP1	100	89.648	ENSRROG00000029767	NCBP1	72	88.247	Rhinopithecus_roxellana
ENSPSIG00000009558	NCBP1	100	89.648	ENSSBOG00000019378	NCBP1	70	85.547	Saimiri_boliviensis_boliviensis
ENSPSIG00000009558	NCBP1	100	80.859	ENSSFOG00015001872	NCBP1	65	80.469	Scleropages_formosus
ENSPSIG00000009558	NCBP1	99	81.445	ENSSMAG00000007463	NCBP1	64	80.626	Scophthalmus_maximus
ENSPSIG00000009558	NCBP1	99	81.996	ENSSDUG00000007019	NCBP1	64	81.996	Seriola_dumerili
ENSPSIG00000009558	NCBP1	99	82.812	ENSSLDG00000021924	NCBP1	64	81.800	Seriola_lalandi_dorsalis
ENSPSIG00000009558	NCBP1	90	80.778	ENSSARG00000007274	NCBP1	59	80.778	Sorex_araneus
ENSPSIG00000009558	NCBP1	97	93.159	ENSSPUG00000008609	NCBP1	64	92.958	Sphenodon_punctatus
ENSPSIG00000009558	NCBP1	99	83.594	ENSSPAG00000012550	NCBP1	64	82.583	Stegastes_partitus
ENSPSIG00000009558	NCBP1	100	89.453	ENSSSCG00000005366	NCBP1	64	89.258	Sus_scrofa
ENSPSIG00000009558	NCBP1	99	94.325	ENSTGUG00000001472	NCBP1	64	94.325	Taeniopygia_guttata
ENSPSIG00000009558	NCBP1	99	82.031	ENSTRUG00000005287	NCBP1	64	81.018	Takifugu_rubripes
ENSPSIG00000009558	NCBP1	100	85.156	ENSTBEG00000004035	NCBP1	64	84.961	Tupaia_belangeri
ENSPSIG00000009558	NCBP1	97	89.113	ENSTTRG00000000507	NCBP1	62	88.911	Tursiops_truncatus
ENSPSIG00000009558	NCBP1	100	89.453	ENSUAMG00000005471	NCBP1	64	89.258	Ursus_americanus
ENSPSIG00000009558	NCBP1	100	89.648	ENSUMAG00000011865	NCBP1	74	89.453	Ursus_maritimus
ENSPSIG00000009558	NCBP1	100	89.648	ENSVPAG00000010537	NCBP1	64	89.453	Vicugna_pacos
ENSPSIG00000009558	NCBP1	100	89.648	ENSVVUG00000019725	NCBP1	64	89.453	Vulpes_vulpes
ENSPSIG00000009558	NCBP1	100	80.469	ENSXETG00000010179	ncbp1	64	80.078	Xenopus_tropicalis
ENSPSIG00000009558	NCBP1	99	82.422	ENSXMAG00000018253	NCBP1	64	82.422	Xiphophorus_maculatus