EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000009821 (Gene tree)
Gene ID: 102456553
Gene Symbol: LSG1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 20381 bases
Position: chrJH210545.1:172689-193069
Accession: 102456553
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000010959	MMR_HSR1	PF01926.23	3.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000011015	LSG1-201	1899	XM_006129852	ENSPSIP00000010959	632 (aa)	XP_025043881	K7FSE9

Gene Model

Click here to download ENSPSIG00000009821's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000009821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000009821	LSG1	99	64.852	ENSG00000041802	LSG1	96	65.474	Homo_sapiens
ENSPSIG00000009821	LSG1	99	61.538	ENSAPOG00000009694	lsg1	95	61.695	Acanthochromis_polyacanthus
ENSPSIG00000009821	LSG1	100	64.075	ENSAMEG00000009343	LSG1	96	64.697	Ailuropoda_melanoleuca
ENSPSIG00000009821	LSG1	99	61.950	ENSACIG00000012406	lsg1	96	62.736	Amphilophus_citrinellus
ENSPSIG00000009821	LSG1	99	60.754	ENSAOCG00000016066	lsg1	95	61.648	Amphiprion_ocellaris
ENSPSIG00000009821	LSG1	99	60.597	ENSAPEG00000003252	lsg1	95	61.490	Amphiprion_percula
ENSPSIG00000009821	LSG1	99	62.362	ENSATEG00000011794	lsg1	96	62.520	Anabas_testudineus
ENSPSIG00000009821	LSG1	99	64.541	ENSACAG00000004222	LSG1	100	65.008	Anolis_carolinensis
ENSPSIG00000009821	LSG1	99	64.861	ENSANAG00000021153	LSG1	96	65.480	Aotus_nancymaae
ENSPSIG00000009821	LSG1	99	58.396	ENSACLG00000000520	lsg1	96	59.455	Astatotilapia_calliptera
ENSPSIG00000009821	LSG1	99	62.016	ENSAMXG00000008271	lsg1	96	62.481	Astyanax_mexicanus
ENSPSIG00000009821	LSG1	99	65.361	ENSBTAG00000008461	LSG1	96	66.406	Bos_taurus
ENSPSIG00000009821	LSG1	68	51.232	WBGene00016907	C53H9.2	85	51.232	Caenorhabditis_elegans
ENSPSIG00000009821	LSG1	99	63.932	ENSCJAG00000013962	LSG1	96	64.551	Callithrix_jacchus
ENSPSIG00000009821	LSG1	99	63.693	ENSCAFG00000013445	LSG1	100	64.319	Canis_familiaris
ENSPSIG00000009821	LSG1	99	63.777	ENSCAFG00020002216	LSG1	99	64.196	Canis_lupus_dingo
ENSPSIG00000009821	LSG1	100	65.109	ENSCHIG00000015769	LSG1	96	66.091	Capra_hircus
ENSPSIG00000009821	LSG1	99	64.330	ENSTSYG00000001447	LSG1	96	65.109	Carlito_syrichta
ENSPSIG00000009821	LSG1	99	65.300	ENSCAPG00000009856	LSG1	99	65.457	Cavia_aperea
ENSPSIG00000009821	LSG1	99	64.031	ENSCCAG00000035744	LSG1	96	64.651	Cebus_capucinus
ENSPSIG00000009821	LSG1	99	65.163	ENSCATG00000042060	LSG1	96	64.541	Cercocebus_atys
ENSPSIG00000009821	LSG1	99	65.055	ENSCSAG00000008796	LSG1	88	65.679	Chlorocebus_sabaeus
ENSPSIG00000009821	LSG1	99	76.332	ENSCPBG00000015941	LSG1	80	77.429	Chrysemys_picta_bellii
ENSPSIG00000009821	LSG1	73	56.995	ENSCING00000007079	-	94	56.995	Ciona_intestinalis
ENSPSIG00000009821	LSG1	68	55.941	ENSCSAVG00000002514	-	86	55.941	Ciona_savignyi
ENSPSIG00000009821	LSG1	99	64.852	ENSCANG00000030709	LSG1	96	65.474	Colobus_angolensis_palliatus
ENSPSIG00000009821	LSG1	99	65.008	ENSCGRG00001019846	Lsg1	96	66.405	Cricetulus_griseus_chok1gshd
ENSPSIG00000009821	LSG1	99	65.008	ENSCGRG00000014617	Lsg1	96	66.405	Cricetulus_griseus_crigri
ENSPSIG00000009821	LSG1	99	61.371	ENSCSEG00000008522	lsg1	96	61.371	Cynoglossus_semilaevis
ENSPSIG00000009821	LSG1	99	61.742	ENSCVAG00000002484	lsg1	96	62.267	Cyprinodon_variegatus
ENSPSIG00000009821	LSG1	99	61.599	ENSDARG00000015352	lsg1	96	62.166	Danio_rerio
ENSPSIG00000009821	LSG1	99	64.241	ENSDNOG00000006224	LSG1	96	64.241	Dasypus_novemcinctus
ENSPSIG00000009821	LSG1	99	44.795	FBgn0266284	Ns3	94	45.268	Drosophila_melanogaster
ENSPSIG00000009821	LSG1	86	79.167	ENSETEG00000003888	LSG1	85	79.167	Echinops_telfairi
ENSPSIG00000009821	LSG1	89	54.483	ENSEBUG00000003119	lsg1	83	54.483	Eptatretus_burgeri
ENSPSIG00000009821	LSG1	99	65.197	ENSEASG00005000678	LSG1	95	65.827	Equus_asinus_asinus
ENSPSIG00000009821	LSG1	99	65.669	ENSECAG00000017659	LSG1	95	66.299	Equus_caballus
ENSPSIG00000009821	LSG1	76	65.812	ENSEEUG00000015217	LSG1	74	65.952	Erinaceus_europaeus
ENSPSIG00000009821	LSG1	99	60.658	ENSELUG00000023973	lsg1	96	60.658	Esox_lucius
ENSPSIG00000009821	LSG1	100	64.541	ENSFCAG00000024957	LSG1	96	65.163	Felis_catus
ENSPSIG00000009821	LSG1	96	66.989	ENSFALG00000007210	LSG1	94	68.438	Ficedula_albicollis
ENSPSIG00000009821	LSG1	99	63.453	ENSFDAG00000017373	LSG1	96	63.495	Fukomys_damarensis
ENSPSIG00000009821	LSG1	99	60.876	ENSFHEG00000003680	lsg1	95	61.033	Fundulus_heteroclitus
ENSPSIG00000009821	LSG1	99	58.713	ENSGMOG00000015834	lsg1	96	57.781	Gadus_morhua
ENSPSIG00000009821	LSG1	99	66.303	ENSGALG00000007058	LSG1	84	67.239	Gallus_gallus
ENSPSIG00000009821	LSG1	99	61.611	ENSGAFG00000015831	lsg1	96	61.927	Gambusia_affinis
ENSPSIG00000009821	LSG1	99	60.187	ENSGACG00000009323	lsg1	96	60.187	Gasterosteus_aculeatus
ENSPSIG00000009821	LSG1	99	65.163	ENSGGOG00000000520	LSG1	96	65.785	Gorilla_gorilla
ENSPSIG00000009821	LSG1	99	59.724	ENSHBUG00000005659	lsg1	96	60.796	Haplochromis_burtoni
ENSPSIG00000009821	LSG1	99	62.871	ENSHGLG00000017390	LSG1	96	62.928	Heterocephalus_glaber_female
ENSPSIG00000009821	LSG1	99	62.871	ENSHGLG00100018587	LSG1	96	62.928	Heterocephalus_glaber_male
ENSPSIG00000009821	LSG1	99	60.093	ENSHCOG00000016848	lsg1	96	60.093	Hippocampus_comes
ENSPSIG00000009821	LSG1	99	62.539	ENSIPUG00000008631	lsg1	96	62.888	Ictalurus_punctatus
ENSPSIG00000009821	LSG1	78	59.802	ENSSTOG00000010234	LSG1	92	62.574	Ictidomys_tridecemlineatus
ENSPSIG00000009821	LSG1	99	64.882	ENSJJAG00000015513	Lsg1	96	65.463	Jaculus_jaculus
ENSPSIG00000009821	LSG1	99	60.095	ENSKMAG00000009681	lsg1	96	60.095	Kryptolebias_marmoratus
ENSPSIG00000009821	LSG1	99	59.810	ENSLBEG00000024261	lsg1	96	60.759	Labrus_bergylta
ENSPSIG00000009821	LSG1	99	64.571	ENSLACG00000013399	LSG1	96	65.015	Latimeria_chalumnae
ENSPSIG00000009821	LSG1	99	62.559	ENSLOCG00000004918	lsg1	96	62.946	Lepisosteus_oculatus
ENSPSIG00000009821	LSG1	99	63.636	ENSLAFG00000012919	-	96	64.577	Loxodonta_africana
ENSPSIG00000009821	LSG1	99	65.008	ENSMFAG00000039903	LSG1	96	64.386	Macaca_fascicularis
ENSPSIG00000009821	LSG1	99	65.008	ENSMMUG00000010708	LSG1	96	65.630	Macaca_mulatta
ENSPSIG00000009821	LSG1	99	65.008	ENSMNEG00000031538	LSG1	96	64.230	Macaca_nemestrina
ENSPSIG00000009821	LSG1	99	64.752	ENSMLEG00000041184	LSG1	96	65.373	Mandrillus_leucophaeus
ENSPSIG00000009821	LSG1	100	62.794	ENSMAMG00000000470	lsg1	96	62.794	Mastacembelus_armatus
ENSPSIG00000009821	LSG1	99	59.724	ENSMZEG00005017865	lsg1	96	60.796	Maylandia_zebra
ENSPSIG00000009821	LSG1	89	68.566	ENSMGAG00000007050	LSG1	98	70.294	Meleagris_gallopavo
ENSPSIG00000009821	LSG1	91	62.437	ENSMAUG00000016976	Lsg1	88	64.225	Mesocricetus_auratus
ENSPSIG00000009821	LSG1	99	64.420	ENSMICG00000049087	LSG1	96	64.743	Microcebus_murinus
ENSPSIG00000009821	LSG1	99	65.620	ENSMOCG00000022136	Lsg1	96	66.354	Microtus_ochrogaster
ENSPSIG00000009821	LSG1	85	68.936	ENSMMOG00000008884	lsg1	95	59.177	Mola_mola
ENSPSIG00000009821	LSG1	100	57.669	ENSMODG00000019828	LSG1	96	57.798	Monodelphis_domestica
ENSPSIG00000009821	LSG1	100	65.827	MGP_CAROLIEiJ_G0020648	Lsg1	96	66.094	Mus_caroli
ENSPSIG00000009821	LSG1	100	66.299	ENSMUSG00000022538	Lsg1	96	66.406	Mus_musculus
ENSPSIG00000009821	LSG1	100	66.509	MGP_PahariEiJ_G0016352	Lsg1	96	66.304	Mus_pahari
ENSPSIG00000009821	LSG1	100	66.142	MGP_SPRETEiJ_G0021544	Lsg1	96	66.250	Mus_spretus
ENSPSIG00000009821	LSG1	99	63.906	ENSMPUG00000003734	LSG1	95	64.531	Mustela_putorius_furo
ENSPSIG00000009821	LSG1	99	65.984	ENSMLUG00000012548	LSG1	96	66.509	Myotis_lucifugus
ENSPSIG00000009821	LSG1	99	64.455	ENSNGAG00000021872	Lsg1	96	65.409	Nannospalax_galili
ENSPSIG00000009821	LSG1	99	65.109	ENSNLEG00000008293	LSG1	96	65.732	Nomascus_leucogenys
ENSPSIG00000009821	LSG1	69	76.744	ENSMEUG00000009041	-	82	76.744	Notamacropus_eugenii
ENSPSIG00000009821	LSG1	99	60.775	ENSONIG00000002635	lsg1	96	60.976	Oreochromis_niloticus
ENSPSIG00000009821	LSG1	99	69.085	ENSOANG00000012742	LSG1	99	69.085	Ornithorhynchus_anatinus
ENSPSIG00000009821	LSG1	99	65.576	ENSOCUG00000004817	LSG1	96	65.732	Oryctolagus_cuniculus
ENSPSIG00000009821	LSG1	99	60.883	ENSORLG00000007695	lsg1	96	61.514	Oryzias_latipes
ENSPSIG00000009821	LSG1	99	61.514	ENSORLG00020016286	lsg1	96	61.406	Oryzias_latipes_hni
ENSPSIG00000009821	LSG1	99	60.883	ENSORLG00015012025	lsg1	96	61.006	Oryzias_latipes_hsok
ENSPSIG00000009821	LSG1	99	60.472	ENSOMEG00000022379	lsg1	96	61.478	Oryzias_melastigma
ENSPSIG00000009821	LSG1	99	65.736	ENSOGAG00000003475	LSG1	96	66.667	Otolemur_garnettii
ENSPSIG00000009821	LSG1	100	65.415	ENSOARG00000020403	LSG1	96	65.881	Ovis_aries
ENSPSIG00000009821	LSG1	99	65.839	ENSPPAG00000029271	LSG1	96	65.839	Pan_paniscus
ENSPSIG00000009821	LSG1	100	64.043	ENSPPRG00000010281	LSG1	96	64.660	Panthera_pardus
ENSPSIG00000009821	LSG1	100	64.697	ENSPTIG00000010789	LSG1	96	65.319	Panthera_tigris_altaica
ENSPSIG00000009821	LSG1	99	65.839	ENSPTRG00000015760	LSG1	96	65.839	Pan_troglodytes
ENSPSIG00000009821	LSG1	99	65.163	ENSPANG00000018249	LSG1	96	64.541	Papio_anubis
ENSPSIG00000009821	LSG1	99	60.766	ENSPKIG00000002895	lsg1	95	60.987	Paramormyrops_kingsleyae
ENSPSIG00000009821	LSG1	99	61.049	ENSPMGG00000000931	lsg1	100	61.049	Periophthalmus_magnuspinnatus
ENSPSIG00000009821	LSG1	99	66.197	ENSPEMG00000012082	-	96	66.250	Peromyscus_maniculatus_bairdii
ENSPSIG00000009821	LSG1	99	58.040	ENSPMAG00000007451	lsg1	96	58.040	Petromyzon_marinus
ENSPSIG00000009821	LSG1	99	65.179	ENSPCIG00000013890	LSG1	78	65.179	Phascolarctos_cinereus
ENSPSIG00000009821	LSG1	99	61.801	ENSPFOG00000021882	lsg1	96	61.838	Poecilia_formosa
ENSPSIG00000009821	LSG1	99	61.025	ENSPLAG00000019536	lsg1	96	61.215	Poecilia_latipinna
ENSPSIG00000009821	LSG1	99	61.085	ENSPMEG00000017281	lsg1	96	61.085	Poecilia_mexicana
ENSPSIG00000009821	LSG1	99	53.941	ENSPREG00000006048	lsg1	96	53.941	Poecilia_reticulata
ENSPSIG00000009821	LSG1	92	64.189	ENSPPYG00000014425	LSG1	96	64.189	Pongo_abelii
ENSPSIG00000009821	LSG1	88	76.000	ENSPCAG00000005511	LSG1	86	76.000	Procavia_capensis
ENSPSIG00000009821	LSG1	99	64.961	ENSPCOG00000012360	LSG1	96	65.278	Propithecus_coquereli
ENSPSIG00000009821	LSG1	99	58.396	ENSPNYG00000021994	lsg1	96	59.455	Pundamilia_nyererei
ENSPSIG00000009821	LSG1	100	62.364	ENSPNAG00000015533	lsg1	97	62.364	Pygocentrus_nattereri
ENSPSIG00000009821	LSG1	100	66.303	ENSRNOG00000001727	Lsg1	96	66.719	Rattus_norvegicus
ENSPSIG00000009821	LSG1	99	64.531	ENSRBIG00000029053	LSG1	96	65.312	Rhinopithecus_bieti
ENSPSIG00000009821	LSG1	99	64.531	ENSRROG00000037702	LSG1	96	65.312	Rhinopithecus_roxellana
ENSPSIG00000009821	LSG1	60	52.326	YGL099W	LSG1	60	52.326	Saccharomyces_cerevisiae
ENSPSIG00000009821	LSG1	99	64.861	ENSSBOG00000034938	LSG1	96	65.480	Saimiri_boliviensis_boliviensis
ENSPSIG00000009821	LSG1	80	64.885	ENSSHAG00000003487	LSG1	100	64.504	Sarcophilus_harrisii
ENSPSIG00000009821	LSG1	99	61.154	ENSSFOG00015008955	lsg1	96	60.763	Scleropages_formosus
ENSPSIG00000009821	LSG1	99	62.693	ENSSDUG00000004622	lsg1	96	62.693	Seriola_dumerili
ENSPSIG00000009821	LSG1	99	63.507	ENSSLDG00000010869	lsg1	96	63.507	Seriola_lalandi_dorsalis
ENSPSIG00000009821	LSG1	72	76.147	ENSSARG00000012981	LSG1	71	76.147	Sorex_araneus
ENSPSIG00000009821	LSG1	99	69.077	ENSSPUG00000016347	LSG1	96	69.077	Sphenodon_punctatus
ENSPSIG00000009821	LSG1	99	60.476	ENSSPAG00000005508	lsg1	95	61.587	Stegastes_partitus
ENSPSIG00000009821	LSG1	100	63.422	ENSSSCG00000011827	LSG1	96	63.994	Sus_scrofa
ENSPSIG00000009821	LSG1	89	68.158	ENSTGUG00000009068	LSG1	97	69.707	Taeniopygia_guttata
ENSPSIG00000009821	LSG1	99	57.764	ENSTRUG00000017380	lsg1	95	57.764	Takifugu_rubripes
ENSPSIG00000009821	LSG1	99	60.568	ENSTNIG00000015570	lsg1	96	60.726	Tetraodon_nigroviridis
ENSPSIG00000009821	LSG1	100	59.750	ENSTTRG00000000559	LSG1	96	59.750	Tursiops_truncatus
ENSPSIG00000009821	LSG1	100	64.915	ENSUAMG00000012454	LSG1	96	65.533	Ursus_americanus
ENSPSIG00000009821	LSG1	100	64.915	ENSUMAG00000000855	LSG1	96	65.533	Ursus_maritimus
ENSPSIG00000009821	LSG1	99	62.539	ENSVPAG00000012400	LSG1	100	62.539	Vicugna_pacos
ENSPSIG00000009821	LSG1	99	63.693	ENSVVUG00000008956	LSG1	97	64.107	Vulpes_vulpes
ENSPSIG00000009821	LSG1	99	64.577	ENSXETG00000003451	lsg1	95	65.920	Xenopus_tropicalis
ENSPSIG00000009821	LSG1	99	60.465	ENSXCOG00000003239	lsg1	96	60.465	Xiphophorus_couchianus
ENSPSIG00000009821	LSG1	99	61.102	ENSXMAG00000005536	lsg1	96	61.102	Xiphophorus_maculatus