EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000010177 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 27901 bases
Position: chrJH206822.1:389128-417028
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000011240	ResIII	PF04851.15	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000011296	CHD3-201	3634	-	ENSPSIP00000011240	1112 (aa)	-	K7FT80

Gene Model

Click here to download ENSPSIG00000010177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000010177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000010177	CHD3	50	41.964	ENSPSIG00000010101	SMARCA1	55	41.964
ENSPSIG00000010177	CHD3	97	75.844	ENSPSIG00000006414	CHD5	59	75.704
ENSPSIG00000010177	CHD3	98	76.755	ENSPSIG00000015546	-	57	75.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000010177	CHD3	98	90.876	ENSG00000170004	CHD3	68	95.349	Homo_sapiens
ENSPSIG00000010177	CHD3	97	80.589	ENSAPOG00000005614	chd3	65	80.495	Acanthochromis_polyacanthus
ENSPSIG00000010177	CHD3	65	96.399	ENSAMEG00000003025	-	53	96.399	Ailuropoda_melanoleuca
ENSPSIG00000010177	CHD3	97	82.044	ENSACIG00000019671	chd3	68	82.126	Amphilophus_citrinellus
ENSPSIG00000010177	CHD3	97	82.505	ENSAOCG00000023784	chd3	67	82.509	Amphiprion_ocellaris
ENSPSIG00000010177	CHD3	97	81.176	ENSAPEG00000006341	chd3	53	81.025	Amphiprion_percula
ENSPSIG00000010177	CHD3	97	80.922	ENSATEG00000000848	chd3	65	77.717	Anabas_testudineus
ENSPSIG00000010177	CHD3	98	91.606	ENSACAG00000004276	CHD3	52	91.332	Anolis_carolinensis
ENSPSIG00000010177	CHD3	98	90.876	ENSANAG00000034323	CHD3	57	90.602	Aotus_nancymaae
ENSPSIG00000010177	CHD3	97	79.742	ENSACLG00000009222	chd3	75	83.539	Astatotilapia_calliptera
ENSPSIG00000010177	CHD3	98	90.751	ENSBTAG00000014377	CHD3	55	90.568	Bos_taurus
ENSPSIG00000010177	CHD3	98	90.785	ENSCJAG00000014766	CHD3	55	90.511	Callithrix_jacchus
ENSPSIG00000010177	CHD3	98	90.420	ENSCAFG00000016859	CHD3	54	89.872	Canis_familiaris
ENSPSIG00000010177	CHD3	98	90.420	ENSCAFG00020007422	CHD3	59	89.872	Canis_lupus_dingo
ENSPSIG00000010177	CHD3	98	90.602	ENSCHIG00000016737	CHD3	55	90.328	Capra_hircus
ENSPSIG00000010177	CHD3	98	90.876	ENSTSYG00000035658	CHD3	55	90.602	Carlito_syrichta
ENSPSIG00000010177	CHD3	98	86.223	ENSCAPG00000014864	CHD3	53	85.858	Cavia_aperea
ENSPSIG00000010177	CHD3	98	90.785	ENSCPOG00000022653	CHD3	54	90.420	Cavia_porcellus
ENSPSIG00000010177	CHD3	98	90.876	ENSCCAG00000034792	CHD3	54	90.602	Cebus_capucinus
ENSPSIG00000010177	CHD3	98	90.959	ENSCATG00000041717	CHD3	55	90.602	Cercocebus_atys
ENSPSIG00000010177	CHD3	98	90.602	ENSCLAG00000010523	CHD3	56	90.328	Chinchilla_lanigera
ENSPSIG00000010177	CHD3	98	91.117	ENSCSAG00000011122	CHD3	55	90.934	Chlorocebus_sabaeus
ENSPSIG00000010177	CHD3	98	97.070	ENSCPBG00000011966	CHD3	81	93.592	Chrysemys_picta_bellii
ENSPSIG00000010177	CHD3	98	91.042	ENSCANG00000037641	CHD3	59	90.768	Colobus_angolensis_palliatus
ENSPSIG00000010177	CHD3	98	90.219	ENSCGRG00001011306	Chd3	56	89.690	Cricetulus_griseus_chok1gshd
ENSPSIG00000010177	CHD3	99	89.128	ENSCGRG00000007878	Chd3	62	88.769	Cricetulus_griseus_crigri
ENSPSIG00000010177	CHD3	97	78.300	ENSCSEG00000004489	chd3	58	81.161	Cynoglossus_semilaevis
ENSPSIG00000010177	CHD3	97	81.165	ENSCVAG00000007293	chd3	59	80.724	Cyprinodon_variegatus
ENSPSIG00000010177	CHD3	97	82.061	ENSDARG00000021405	chd3	58	81.826	Danio_rerio
ENSPSIG00000010177	CHD3	98	90.693	ENSDORG00000010713	Chd3	56	90.420	Dipodomys_ordii
ENSPSIG00000010177	CHD3	98	83.759	ENSETEG00000017733	CHD3	56	83.485	Echinops_telfairi
ENSPSIG00000010177	CHD3	77	78.295	ENSEBUG00000008310	chd3	57	78.434	Eptatretus_burgeri
ENSPSIG00000010177	CHD3	98	90.785	ENSEASG00005019360	CHD3	59	90.511	Equus_asinus_asinus
ENSPSIG00000010177	CHD3	98	90.785	ENSECAG00000010051	CHD3	59	90.511	Equus_caballus
ENSPSIG00000010177	CHD3	98	83.942	ENSEEUG00000015205	CHD3	55	83.668	Erinaceus_europaeus
ENSPSIG00000010177	CHD3	97	79.562	ENSELUG00000019499	chd3	69	78.494	Esox_lucius
ENSPSIG00000010177	CHD3	98	90.602	ENSFCAG00000009629	CHD3	53	90.328	Felis_catus
ENSPSIG00000010177	CHD3	98	90.511	ENSFDAG00000008220	CHD3	55	90.237	Fukomys_damarensis
ENSPSIG00000010177	CHD3	91	79.468	ENSGMOG00000013599	chd3	55	80.101	Gadus_morhua
ENSPSIG00000010177	CHD3	87	78.122	ENSGAFG00000004055	chd3	82	79.487	Gambusia_affinis
ENSPSIG00000010177	CHD3	97	78.591	ENSGACG00000019275	chd3	56	78.257	Gasterosteus_aculeatus
ENSPSIG00000010177	CHD3	98	96.157	ENSGAGG00000013164	CHD3	74	94.429	Gopherus_agassizii
ENSPSIG00000010177	CHD3	99	90.162	ENSGGOG00000013496	CHD3	59	90.676	Gorilla_gorilla
ENSPSIG00000010177	CHD3	98	90.602	ENSHGLG00000012017	CHD3	54	90.328	Heterocephalus_glaber_female
ENSPSIG00000010177	CHD3	79	94.000	ENSHGLG00100013902	CHD3	52	94.000	Heterocephalus_glaber_male
ENSPSIG00000010177	CHD3	97	78.905	ENSHCOG00000010170	chd3	55	78.214	Hippocampus_comes
ENSPSIG00000010177	CHD3	93	83.142	ENSIPUG00000003271	chd3	62	83.429	Ictalurus_punctatus
ENSPSIG00000010177	CHD3	98	90.967	ENSSTOG00000025907	CHD3	56	90.693	Ictidomys_tridecemlineatus
ENSPSIG00000010177	CHD3	98	90.511	ENSJJAG00000017633	Chd3	56	90.237	Jaculus_jaculus
ENSPSIG00000010177	CHD3	98	78.150	ENSKMAG00000019292	chd3	59	78.962	Kryptolebias_marmoratus
ENSPSIG00000010177	CHD3	97	76.433	ENSLBEG00000028485	chd3	54	78.891	Labrus_bergylta
ENSPSIG00000010177	CHD3	98	82.177	ENSLACG00000008031	CHD3	57	82.230	Latimeria_chalumnae
ENSPSIG00000010177	CHD3	97	83.655	ENSLOCG00000013965	chd3	53	84.047	Lepisosteus_oculatus
ENSPSIG00000010177	CHD3	90	94.584	ENSLAFG00000000572	CHD3	53	94.584	Loxodonta_africana
ENSPSIG00000010177	CHD3	98	90.951	ENSMFAG00000020113	CHD3	60	90.676	Macaca_fascicularis
ENSPSIG00000010177	CHD3	98	90.785	ENSMMUG00000022221	CHD3	55	90.511	Macaca_mulatta
ENSPSIG00000010177	CHD3	98	90.876	ENSMNEG00000001728	CHD3	59	90.602	Macaca_nemestrina
ENSPSIG00000010177	CHD3	98	91.042	ENSMLEG00000032249	CHD3	55	90.602	Mandrillus_leucophaeus
ENSPSIG00000010177	CHD3	97	81.577	ENSMAMG00000000564	chd3	65	81.586	Mastacembelus_armatus
ENSPSIG00000010177	CHD3	98	89.872	ENSMAUG00000013873	Chd3	59	89.507	Mesocricetus_auratus
ENSPSIG00000010177	CHD3	98	90.876	ENSMICG00000008741	CHD3	53	90.602	Microcebus_murinus
ENSPSIG00000010177	CHD3	98	90.328	ENSMOCG00000004848	Chd3	56	89.872	Microtus_ochrogaster
ENSPSIG00000010177	CHD3	97	79.945	ENSMMOG00000012699	chd3	58	79.635	Mola_mola
ENSPSIG00000010177	CHD3	98	90.659	ENSMODG00000007509	CHD3	60	90.476	Monodelphis_domestica
ENSPSIG00000010177	CHD3	98	90.328	MGP_CAROLIEiJ_G0016564	Chd3	57	90.055	Mus_caroli
ENSPSIG00000010177	CHD3	98	90.328	ENSMUSG00000018474	Chd3	57	90.055	Mus_musculus
ENSPSIG00000010177	CHD3	98	90.602	MGP_PahariEiJ_G0017695	Chd3	57	90.055	Mus_pahari
ENSPSIG00000010177	CHD3	98	90.420	MGP_SPRETEiJ_G0017400	Chd3	57	90.146	Mus_spretus
ENSPSIG00000010177	CHD3	97	90.625	ENSMPUG00000008861	CHD3	62	90.349	Mustela_putorius_furo
ENSPSIG00000010177	CHD3	98	90.785	ENSMLUG00000014643	-	54	90.602	Myotis_lucifugus
ENSPSIG00000010177	CHD3	98	90.602	ENSNGAG00000000773	Chd3	54	90.328	Nannospalax_galili
ENSPSIG00000010177	CHD3	89	84.985	ENSNBRG00000000636	chd3	60	85.185	Neolamprologus_brichardi
ENSPSIG00000010177	CHD3	98	90.476	ENSNLEG00000009770	CHD3	57	89.872	Nomascus_leucogenys
ENSPSIG00000010177	CHD3	89	79.821	ENSMEUG00000005852	CHD3	51	79.372	Notamacropus_eugenii
ENSPSIG00000010177	CHD3	98	89.781	ENSOPRG00000011069	CHD3	58	89.507	Ochotona_princeps
ENSPSIG00000010177	CHD3	98	90.693	ENSODEG00000017785	CHD3	54	90.420	Octodon_degus
ENSPSIG00000010177	CHD3	97	81.108	ENSONIG00000009292	chd3	57	80.543	Oreochromis_niloticus
ENSPSIG00000010177	CHD3	98	88.919	ENSOCUG00000029299	CHD3	55	88.535	Oryctolagus_cuniculus
ENSPSIG00000010177	CHD3	93	79.301	ENSORLG00000007107	chd3	63	76.763	Oryzias_latipes
ENSPSIG00000010177	CHD3	79	80.844	ENSORLG00020008387	chd3	76	81.072	Oryzias_latipes_hni
ENSPSIG00000010177	CHD3	97	82.028	ENSOMEG00000013691	chd3	64	81.852	Oryzias_melastigma
ENSPSIG00000010177	CHD3	98	90.237	ENSOGAG00000003216	CHD3	55	89.964	Otolemur_garnettii
ENSPSIG00000010177	CHD3	98	90.842	ENSOARG00000017855	CHD3	55	90.659	Ovis_aries
ENSPSIG00000010177	CHD3	98	90.494	ENSPPAG00000032886	CHD3	59	90.219	Pan_paniscus
ENSPSIG00000010177	CHD3	98	90.693	ENSPPRG00000000626	CHD3	55	90.420	Panthera_pardus
ENSPSIG00000010177	CHD3	98	91.042	ENSPTRG00000008714	CHD3	59	90.768	Pan_troglodytes
ENSPSIG00000010177	CHD3	98	91.042	ENSPANG00000023938	CHD3	60	90.768	Papio_anubis
ENSPSIG00000010177	CHD3	93	90.476	ENSPKIG00000006305	chd3	56	90.476	Paramormyrops_kingsleyae
ENSPSIG00000010177	CHD3	98	90.328	ENSPEMG00000014262	Chd3	55	89.781	Peromyscus_maniculatus_bairdii
ENSPSIG00000010177	CHD3	98	90.659	ENSPCIG00000005442	CHD3	62	89.918	Phascolarctos_cinereus
ENSPSIG00000010177	CHD3	97	80.651	ENSPFOG00000012464	chd3	51	80.486	Poecilia_formosa
ENSPSIG00000010177	CHD3	97	76.874	ENSPLAG00000002887	chd3	74	79.909	Poecilia_latipinna
ENSPSIG00000010177	CHD3	78	80.457	ENSPMEG00000016725	chd3	74	80.686	Poecilia_mexicana
ENSPSIG00000010177	CHD3	97	81.751	ENSPREG00000011044	chd3	58	81.760	Poecilia_reticulata
ENSPSIG00000010177	CHD3	98	88.412	ENSPPYG00000007940	CHD3	55	88.139	Pongo_abelii
ENSPSIG00000010177	CHD3	92	96.533	ENSPCAG00000004350	CHD3	51	96.533	Procavia_capensis
ENSPSIG00000010177	CHD3	98	90.967	ENSPCOG00000020952	CHD3	54	90.693	Propithecus_coquereli
ENSPSIG00000010177	CHD3	98	82.514	ENSPNAG00000020393	chd3	64	81.793	Pygocentrus_nattereri
ENSPSIG00000010177	CHD3	98	90.420	ENSRNOG00000009722	Chd3	59	89.964	Rattus_norvegicus
ENSPSIG00000010177	CHD3	98	90.659	ENSRBIG00000033562	CHD3	59	90.476	Rhinopithecus_bieti
ENSPSIG00000010177	CHD3	98	90.876	ENSRROG00000029554	CHD3	58	90.602	Rhinopithecus_roxellana
ENSPSIG00000010177	CHD3	98	90.876	ENSSBOG00000020719	CHD3	59	90.602	Saimiri_boliviensis_boliviensis
ENSPSIG00000010177	CHD3	98	90.328	ENSSHAG00000014412	CHD3	56	90.055	Sarcophilus_harrisii
ENSPSIG00000010177	CHD3	91	87.814	ENSSFOG00015023123	chd3	60	78.358	Scleropages_formosus
ENSPSIG00000010177	CHD3	97	81.198	ENSSMAG00000006451	chd3	65	81.005	Scophthalmus_maximus
ENSPSIG00000010177	CHD3	78	80.485	ENSSDUG00000005792	chd3	76	83.026	Seriola_dumerili
ENSPSIG00000010177	CHD3	97	82.532	ENSSPAG00000013694	chd3	67	82.445	Stegastes_partitus
ENSPSIG00000010177	CHD3	98	91.026	ENSSSCG00000021363	CHD3	63	90.842	Sus_scrofa
ENSPSIG00000010177	CHD3	98	78.623	ENSTRUG00000014990	chd3	65	78.327	Takifugu_rubripes
ENSPSIG00000010177	CHD3	97	80.199	ENSTNIG00000012998	chd3	57	79.839	Tetraodon_nigroviridis
ENSPSIG00000010177	CHD3	84	91.525	ENSTBEG00000011454	-	52	91.525	Tupaia_belangeri
ENSPSIG00000010177	CHD3	94	93.817	ENSTTRG00000010295	CHD3	52	93.817	Tursiops_truncatus
ENSPSIG00000010177	CHD3	98	88.899	ENSUAMG00000005475	CHD3	59	88.626	Ursus_americanus
ENSPSIG00000010177	CHD3	98	90.420	ENSVVUG00000028011	CHD3	57	89.872	Vulpes_vulpes
ENSPSIG00000010177	CHD3	98	77.070	ENSXETG00000012991	chd3	54	76.615	Xenopus_tropicalis
ENSPSIG00000010177	CHD3	79	83.089	ENSXCOG00000000809	chd3	79	83.315	Xiphophorus_couchianus
ENSPSIG00000010177	CHD3	97	81.659	ENSXMAG00000016035	chd3	69	81.485	Xiphophorus_maculatus