EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000010248 (Gene tree)
Gene ID: 102452821
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 11731 bases
Position: chrJH208395.1:348833-360563
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	1	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	2	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	3	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	4	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	5	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	6	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	7	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	8	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	9	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	10	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	11	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	12	13
ENSPSIP00000011322	zf-C2H2	PF00096.26	9.6e-76	13	13
ENSPSIP00000011322	zf-met	PF12874.7	1.9e-06	1	3
ENSPSIP00000011322	zf-met	PF12874.7	1.9e-06	2	3
ENSPSIP00000011322	zf-met	PF12874.7	1.9e-06	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000011378	-	4871	-	ENSPSIP00000011322	601 (aa)	-	K7FTG2

Gene Model

Click here to download ENSPSIG00000010248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000010248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000010248	-	63	34.158	ENSPSIG00000011562	-	88	34.158
ENSPSIG00000010248	-	63	52.020	ENSPSIG00000016033	-	54	52.020
ENSPSIG00000010248	-	63	31.282	ENSPSIG00000000943	ZNF770	99	39.326
ENSPSIG00000010248	-	56	48.299	ENSPSIG00000009270	-	87	47.489
ENSPSIG00000010248	-	80	66.923	ENSPSIG00000000333	-	98	66.923
ENSPSIG00000010248	-	65	39.702	ENSPSIG00000004303	ZNF319	93	39.702
ENSPSIG00000010248	-	68	47.956	ENSPSIG00000008588	-	100	47.356
ENSPSIG00000010248	-	63	43.216	ENSPSIG00000004682	ZNF652	65	43.216
ENSPSIG00000010248	-	93	52.484	ENSPSIG00000015465	-	99	52.484
ENSPSIG00000010248	-	68	62.228	ENSPSIG00000005128	-	100	62.228
ENSPSIG00000010248	-	81	46.188	ENSPSIG00000009423	ZBTB24	52	45.374
ENSPSIG00000010248	-	63	44.498	ENSPSIG00000001739	-	99	44.498
ENSPSIG00000010248	-	64	45.963	ENSPSIG00000008734	GFI1	51	45.963
ENSPSIG00000010248	-	94	46.304	ENSPSIG00000002565	-	82	46.304
ENSPSIG00000010248	-	60	35.211	ENSPSIG00000011722	GTF3A	71	35.211
ENSPSIG00000010248	-	64	50.714	ENSPSIG00000009650	-	92	50.570
ENSPSIG00000010248	-	92	54.703	ENSPSIG00000012865	-	98	54.703
ENSPSIG00000010248	-	68	54.610	ENSPSIG00000001026	-	91	54.610
ENSPSIG00000010248	-	65	51.553	ENSPSIG00000006790	-	90	51.553
ENSPSIG00000010248	-	64	40.299	ENSPSIG00000004262	SNAI3	61	41.071
ENSPSIG00000010248	-	95	62.542	ENSPSIG00000005672	-	100	62.542
ENSPSIG00000010248	-	62	34.503	ENSPSIG00000016553	-	52	34.503
ENSPSIG00000010248	-	67	36.364	ENSPSIG00000002913	OVOL1	62	36.364
ENSPSIG00000010248	-	66	33.588	ENSPSIG00000005522	ZNF646	96	43.333
ENSPSIG00000010248	-	92	42.118	ENSPSIG00000000760	-	93	41.866
ENSPSIG00000010248	-	63	41.135	ENSPSIG00000003607	SNAI1	57	41.135
ENSPSIG00000010248	-	63	43.284	ENSPSIG00000016395	SNAI2	52	43.284
ENSPSIG00000010248	-	78	66.092	ENSPSIG00000010405	-	99	66.092
ENSPSIG00000010248	-	68	50.000	ENSPSIG00000003152	-	79	50.000
ENSPSIG00000010248	-	65	51.029	ENSPSIG00000016247	-	53	51.029
ENSPSIG00000010248	-	97	67.890	ENSPSIG00000004502	-	89	67.890
ENSPSIG00000010248	-	97	68.750	ENSPSIG00000013021	-	100	68.750
ENSPSIG00000010248	-	72	56.274	ENSPSIG00000002569	-	89	56.274
ENSPSIG00000010248	-	95	52.381	ENSPSIG00000016380	-	100	52.381
ENSPSIG00000010248	-	62	34.156	ENSPSIG00000002538	ZNF521	75	40.449
ENSPSIG00000010248	-	77	54.950	ENSPSIG00000000522	-	100	54.950
ENSPSIG00000010248	-	96	58.233	ENSPSIG00000015459	-	100	56.376
ENSPSIG00000010248	-	64	47.297	ENSPSIG00000012650	-	95	45.672
ENSPSIG00000010248	-	87	63.729	ENSPSIG00000000075	-	98	63.729
ENSPSIG00000010248	-	79	55.411	ENSPSIG00000015216	-	96	55.411
ENSPSIG00000010248	-	77	72.563	ENSPSIG00000009603	-	99	71.169
ENSPSIG00000010248	-	67	48.544	ENSPSIG00000004647	-	57	49.171
ENSPSIG00000010248	-	91	55.600	ENSPSIG00000009893	-	99	58.235
ENSPSIG00000010248	-	96	56.966	ENSPSIG00000005603	-	99	56.966
ENSPSIG00000010248	-	65	38.830	ENSPSIG00000013505	PRDM5	73	39.147
ENSPSIG00000010248	-	93	51.899	ENSPSIG00000010328	-	97	51.899
ENSPSIG00000010248	-	65	40.000	ENSPSIG00000006586	-	99	40.000
ENSPSIG00000010248	-	65	51.667	ENSPSIG00000000672	-	85	51.667
ENSPSIG00000010248	-	94	50.856	ENSPSIG00000004614	-	99	50.856

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000010248	-	65	45.146	ENSACAG00000024898	-	98	45.146	Anolis_carolinensis
ENSPSIG00000010248	-	93	52.011	ENSACAG00000024956	-	100	52.011	Anolis_carolinensis
ENSPSIG00000010248	-	67	58.020	ENSACAG00000008664	-	69	58.020	Anolis_carolinensis
ENSPSIG00000010248	-	64	53.230	ENSAMXG00000010805	-	99	53.230	Astyanax_mexicanus
ENSPSIG00000010248	-	66	54.605	ENSAMXG00000038536	-	86	54.483	Astyanax_mexicanus
ENSPSIG00000010248	-	66	63.240	ENSAMXG00000038636	-	99	63.240	Astyanax_mexicanus
ENSPSIG00000010248	-	67	57.759	ENSAMXG00000034847	-	84	57.759	Astyanax_mexicanus
ENSPSIG00000010248	-	72	49.843	ENSAMXG00000042784	-	91	57.018	Astyanax_mexicanus
ENSPSIG00000010248	-	68	55.263	ENSAMXG00000042746	-	86	54.140	Astyanax_mexicanus
ENSPSIG00000010248	-	66	57.500	ENSAMXG00000032841	-	80	57.500	Astyanax_mexicanus
ENSPSIG00000010248	-	68	48.551	ENSAMXG00000035246	-	72	48.551	Astyanax_mexicanus
ENSPSIG00000010248	-	67	63.816	ENSAMXG00000036233	-	81	63.816	Astyanax_mexicanus
ENSPSIG00000010248	-	69	53.036	ENSAMXG00000034344	-	77	53.036	Astyanax_mexicanus
ENSPSIG00000010248	-	67	52.475	ENSAMXG00000038325	-	92	52.475	Astyanax_mexicanus
ENSPSIG00000010248	-	68	62.931	ENSAMXG00000025452	-	96	62.931	Astyanax_mexicanus
ENSPSIG00000010248	-	65	43.322	ENSBTAG00000038322	-	77	44.000	Bos_taurus
ENSPSIG00000010248	-	65	41.275	ENSCPBG00000013652	-	69	42.282	Chrysemys_picta_bellii
ENSPSIG00000010248	-	67	50.407	ENSCPBG00000001526	-	81	50.407	Chrysemys_picta_bellii
ENSPSIG00000010248	-	80	55.975	ENSCPBG00000026433	-	71	55.975	Chrysemys_picta_bellii
ENSPSIG00000010248	-	63	45.333	ENSCPBG00000008580	-	76	45.333	Chrysemys_picta_bellii
ENSPSIG00000010248	-	66	46.591	ENSCSAVG00000010960	-	100	42.893	Ciona_savignyi
ENSPSIG00000010248	-	64	44.737	ENSDNOG00000047495	-	79	44.737	Dasypus_novemcinctus
ENSPSIG00000010248	-	63	47.733	ENSEBUG00000008306	-	76	47.733	Eptatretus_burgeri
ENSPSIG00000010248	-	67	47.598	ENSEBUG00000015837	-	78	44.214	Eptatretus_burgeri
ENSPSIG00000010248	-	71	45.355	ENSEBUG00000014717	-	75	44.762	Eptatretus_burgeri
ENSPSIG00000010248	-	88	47.895	ENSEBUG00000012919	-	87	49.730	Eptatretus_burgeri
ENSPSIG00000010248	-	64	49.117	ENSEBUG00000002075	-	77	49.117	Eptatretus_burgeri
ENSPSIG00000010248	-	87	46.624	ENSEBUG00000011435	-	95	46.624	Eptatretus_burgeri
ENSPSIG00000010248	-	71	37.990	ENSEBUG00000013875	-	89	37.990	Eptatretus_burgeri
ENSPSIG00000010248	-	65	46.615	ENSEBUG00000011694	-	96	51.397	Eptatretus_burgeri
ENSPSIG00000010248	-	65	43.536	ENSEBUG00000005264	-	76	43.536	Eptatretus_burgeri
ENSPSIG00000010248	-	64	44.487	ENSEASG00005004469	-	70	44.487	Equus_asinus_asinus
ENSPSIG00000010248	-	81	49.451	ENSFHEG00000004382	-	67	49.451	Fundulus_heteroclitus
ENSPSIG00000010248	-	67	45.000	ENSGMOG00000018506	-	100	45.000	Gadus_morhua
ENSPSIG00000010248	-	77	50.282	ENSGALG00000053507	-	93	50.282	Gallus_gallus
ENSPSIG00000010248	-	69	46.711	ENSGALG00000049609	-	58	46.711	Gallus_gallus
ENSPSIG00000010248	-	91	47.674	ENSGALG00000044069	-	84	47.674	Gallus_gallus
ENSPSIG00000010248	-	65	50.185	ENSGALG00000055127	-	74	48.432	Gallus_gallus
ENSPSIG00000010248	-	70	50.904	ENSGALG00000054325	-	97	50.904	Gallus_gallus
ENSPSIG00000010248	-	64	55.150	ENSGALG00000046336	-	97	55.814	Gallus_gallus
ENSPSIG00000010248	-	65	48.120	ENSGACG00000006283	-	100	46.617	Gasterosteus_aculeatus
ENSPSIG00000010248	-	69	54.417	ENSGAGG00000018885	-	77	54.417	Gopherus_agassizii
ENSPSIG00000010248	-	65	55.618	ENSGAGG00000011399	-	87	55.618	Gopherus_agassizii
ENSPSIG00000010248	-	74	48.396	ENSGAGG00000011366	-	95	48.396	Gopherus_agassizii
ENSPSIG00000010248	-	65	43.590	ENSHCOG00000018201	-	86	43.590	Hippocampus_comes
ENSPSIG00000010248	-	73	58.145	ENSIPUG00000015468	-	95	58.145	Ictalurus_punctatus
ENSPSIG00000010248	-	67	38.333	ENSIPUG00000012109	ZN12	51	37.612	Ictalurus_punctatus
ENSPSIG00000010248	-	66	52.778	ENSIPUG00000021515	-	94	53.149	Ictalurus_punctatus
ENSPSIG00000010248	-	65	47.471	ENSJJAG00000023633	Zfp672	91	40.342	Jaculus_jaculus
ENSPSIG00000010248	-	93	48.250	ENSLACG00000022211	-	98	48.250	Latimeria_chalumnae
ENSPSIG00000010248	-	70	39.073	ENSLACG00000009005	-	99	44.498	Latimeria_chalumnae
ENSPSIG00000010248	-	65	42.857	ENSLACG00000005264	-	97	42.857	Latimeria_chalumnae
ENSPSIG00000010248	-	63	37.931	ENSLOCG00000014210	-	50	45.763	Lepisosteus_oculatus
ENSPSIG00000010248	-	65	43.403	ENSLOCG00000017864	-	99	43.403	Lepisosteus_oculatus
ENSPSIG00000010248	-	68	53.043	ENSMGAG00000013362	-	100	53.043	Meleagris_gallopavo
ENSPSIG00000010248	-	69	47.867	ENSMAUG00000009945	Zfp672	90	42.537	Mesocricetus_auratus
ENSPSIG00000010248	-	64	45.652	ENSMMOG00000003923	-	87	45.652	Mola_mola
ENSPSIG00000010248	-	95	46.354	ENSMODG00000010532	-	100	46.354	Monodelphis_domestica
ENSPSIG00000010248	-	94	45.220	ENSMODG00000001880	-	99	45.220	Monodelphis_domestica
ENSPSIG00000010248	-	93	54.500	MGP_CAROLIEiJ_G0030502	-	92	54.500	Mus_caroli
ENSPSIG00000010248	-	65	47.059	MGP_CAROLIEiJ_G0016391	Zfp672	100	53.659	Mus_caroli
ENSPSIG00000010248	-	68	51.183	ENSMUSG00000030823	9130019O22Rik	90	51.183	Mus_musculus
ENSPSIG00000010248	-	65	47.059	ENSMUSG00000049755	Zfp672	100	47.500	Mus_musculus
ENSPSIG00000010248	-	65	54.500	MGP_SPRETEiJ_G0031613	-	84	54.500	Mus_spretus
ENSPSIG00000010248	-	69	47.393	MGP_SPRETEiJ_G0017233	Zfp672	100	51.220	Mus_spretus
ENSPSIG00000010248	-	93	43.307	ENSNGAG00000015777	Zim1	94	43.307	Nannospalax_galili
ENSPSIG00000010248	-	67	44.947	ENSNBRG00000000708	-	88	46.687	Neolamprologus_brichardi
ENSPSIG00000010248	-	65	40.496	ENSNBRG00000007276	-	57	40.496	Neolamprologus_brichardi
ENSPSIG00000010248	-	70	51.685	ENSORLG00020001922	-	85	48.000	Oryzias_latipes_hni
ENSPSIG00000010248	-	65	51.515	ENSOMEG00000001598	-	75	51.515	Oryzias_melastigma
ENSPSIG00000010248	-	70	47.268	ENSPREG00000002642	-	92	47.268	Poecilia_reticulata
ENSPSIG00000010248	-	64	46.721	ENSPNYG00000015486	-	58	46.721	Pundamilia_nyererei
ENSPSIG00000010248	-	65	57.895	ENSPNAG00000018395	-	59	57.895	Pygocentrus_nattereri
ENSPSIG00000010248	-	71	57.000	ENSPNAG00000000088	-	95	57.000	Pygocentrus_nattereri
ENSPSIG00000010248	-	67	41.523	ENSRNOG00000002713	Zfp672	96	41.523	Rattus_norvegicus
ENSPSIG00000010248	-	94	44.562	ENSSHAG00000018106	-	99	44.562	Sarcophilus_harrisii
ENSPSIG00000010248	-	66	52.243	ENSSFOG00015019818	-	73	50.161	Scleropages_formosus
ENSPSIG00000010248	-	68	43.960	ENSSMAG00000004252	-	82	40.691	Scophthalmus_maximus
ENSPSIG00000010248	-	68	52.507	ENSSPUG00000010016	-	95	52.507	Sphenodon_punctatus
ENSPSIG00000010248	-	93	54.959	ENSSPUG00000004366	-	83	54.959	Sphenodon_punctatus
ENSPSIG00000010248	-	64	52.222	ENSSPAG00000021653	-	91	52.222	Stegastes_partitus
ENSPSIG00000010248	-	64	57.407	ENSTGUG00000018351	-	100	57.407	Taeniopygia_guttata
ENSPSIG00000010248	-	65	54.790	ENSTGUG00000015210	-	100	54.790	Taeniopygia_guttata
ENSPSIG00000010248	-	70	41.499	ENSTRUG00000022066	-	94	44.615	Takifugu_rubripes
ENSPSIG00000010248	-	67	42.745	ENSXETG00000031192	-	100	42.745	Xenopus_tropicalis
ENSPSIG00000010248	-	67	58.462	ENSXCOG00000006553	-	89	58.462	Xiphophorus_couchianus
ENSPSIG00000010248	-	65	49.215	ENSXMAG00000026680	-	83	49.215	Xiphophorus_maculatus