EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000010255 (Gene tree)
Gene ID: 102450987
Gene Symbol: SMARCAD1
Alias: -
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 97384 bases
Position: chrJH205560.1:2141423-2238806
Accession: 102450987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000011330	ResIII	PF04851.15	4.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000011387	SMARCAD1-201	4157	XM_006111951	ENSPSIP00000011330	1031 (aa)	XP_006112013	K7FTH0

Gene Model

Click here to download ENSPSIG00000010255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000010255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000010255	SMARCAD1	50	38.078	ENSPSIG00000005462	HELLS	67	38.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000010255	SMARCAD1	100	73.301	ENSG00000163104	SMARCAD1	100	84.422	Homo_sapiens
ENSPSIG00000010255	SMARCAD1	100	73.040	ENSAMEG00000005844	SMARCAD1	100	73.040	Ailuropoda_melanoleuca
ENSPSIG00000010255	SMARCAD1	67	69.907	ENSACIG00000018326	smarcad1a	93	65.120	Amphilophus_citrinellus
ENSPSIG00000010255	SMARCAD1	96	64.358	ENSAOCG00000019762	smarcad1a	86	65.625	Amphiprion_ocellaris
ENSPSIG00000010255	SMARCAD1	99	64.502	ENSAPEG00000003889	smarcad1a	88	65.774	Amphiprion_percula
ENSPSIG00000010255	SMARCAD1	78	65.436	ENSATEG00000015608	smarcad1a	91	62.759	Anabas_testudineus
ENSPSIG00000010255	SMARCAD1	92	79.400	ENSAPLG00000004630	SMARCAD1	100	80.124	Anas_platyrhynchos
ENSPSIG00000010255	SMARCAD1	100	72.981	ENSACAG00000013554	SMARCAD1	100	72.447	Anolis_carolinensis
ENSPSIG00000010255	SMARCAD1	100	72.970	ENSANAG00000020488	SMARCAD1	99	76.940	Aotus_nancymaae
ENSPSIG00000010255	SMARCAD1	79	64.791	ENSACLG00000017063	smarcad1a	90	56.142	Astatotilapia_calliptera
ENSPSIG00000010255	SMARCAD1	76	59.199	ENSAMXG00000019130	smarcad1b	99	53.030	Astyanax_mexicanus
ENSPSIG00000010255	SMARCAD1	65	63.299	ENSAMXG00000015470	smarcad1a	94	63.299	Astyanax_mexicanus
ENSPSIG00000010255	SMARCAD1	100	73.066	ENSBTAG00000017061	SMARCAD1	100	72.970	Bos_taurus
ENSPSIG00000010255	SMARCAD1	60	43.429	WBGene00010845	M03C11.8	63	42.901	Caenorhabditis_elegans
ENSPSIG00000010255	SMARCAD1	100	73.154	ENSCJAG00000006778	SMARCAD1	100	73.058	Callithrix_jacchus
ENSPSIG00000010255	SMARCAD1	100	73.136	ENSCAFG00000010026	SMARCAD1	100	72.945	Canis_familiaris
ENSPSIG00000010255	SMARCAD1	85	77.640	ENSCAFG00020003994	SMARCAD1	99	77.640	Canis_lupus_dingo
ENSPSIG00000010255	SMARCAD1	100	73.136	ENSCHIG00000012905	SMARCAD1	100	73.040	Capra_hircus
ENSPSIG00000010255	SMARCAD1	100	72.919	ENSTSYG00000002706	SMARCAD1	100	72.823	Carlito_syrichta
ENSPSIG00000010255	SMARCAD1	89	62.110	ENSCAPG00000016744	SMARCAD1	96	62.124	Cavia_aperea
ENSPSIG00000010255	SMARCAD1	100	72.684	ENSCPOG00000011398	SMARCAD1	100	72.249	Cavia_porcellus
ENSPSIG00000010255	SMARCAD1	100	73.110	ENSCCAG00000022264	SMARCAD1	100	84.255	Cebus_capucinus
ENSPSIG00000010255	SMARCAD1	100	73.206	ENSCATG00000035663	SMARCAD1	99	78.093	Cercocebus_atys
ENSPSIG00000010255	SMARCAD1	81	78.436	ENSCSAG00000004186	SMARCAD1	100	78.436	Chlorocebus_sabaeus
ENSPSIG00000010255	SMARCAD1	100	92.850	ENSCPBG00000013203	SMARCAD1	100	92.367	Chrysemys_picta_bellii
ENSPSIG00000010255	SMARCAD1	64	50.975	ENSCING00000001688	-	99	50.975	Ciona_intestinalis
ENSPSIG00000010255	SMARCAD1	100	73.110	ENSCANG00000003556	SMARCAD1	100	84.422	Colobus_angolensis_palliatus
ENSPSIG00000010255	SMARCAD1	100	72.031	ENSCGRG00001015056	Smarcad1	100	71.552	Cricetulus_griseus_chok1gshd
ENSPSIG00000010255	SMARCAD1	100	72.031	ENSCGRG00000014087	Smarcad1	100	71.552	Cricetulus_griseus_crigri
ENSPSIG00000010255	SMARCAD1	99	62.536	ENSCSEG00000014419	-	95	51.875	Cynoglossus_semilaevis
ENSPSIG00000010255	SMARCAD1	99	63.401	ENSCSEG00000017903	smarcad1a	95	60.502	Cynoglossus_semilaevis
ENSPSIG00000010255	SMARCAD1	87	54.341	ENSDARG00000014041	smarcad1a	94	54.633	Danio_rerio
ENSPSIG00000010255	SMARCAD1	81	56.176	ENSDARG00000073721	smarcad1b	82	59.343	Danio_rerio
ENSPSIG00000010255	SMARCAD1	100	73.014	ENSDNOG00000000806	-	100	72.919	Dasypus_novemcinctus
ENSPSIG00000010255	SMARCAD1	100	72.142	ENSDORG00000012331	Smarcad1	100	71.662	Dipodomys_ordii
ENSPSIG00000010255	SMARCAD1	62	46.237	FBgn0032157	Etl1	80	44.767	Drosophila_melanogaster
ENSPSIG00000010255	SMARCAD1	61	46.573	ENSEBUG00000003969	smarcad1a	96	46.840	Eptatretus_burgeri
ENSPSIG00000010255	SMARCAD1	100	73.327	ENSEASG00005012382	SMARCAD1	98	76.418	Equus_asinus_asinus
ENSPSIG00000010255	SMARCAD1	100	73.327	ENSECAG00000011562	SMARCAD1	100	73.231	Equus_caballus
ENSPSIG00000010255	SMARCAD1	75	58.184	ENSELUG00000019154	smarcad1b	79	58.131	Esox_lucius
ENSPSIG00000010255	SMARCAD1	100	50.923	ENSELUG00000018535	smarcad1a	100	51.064	Esox_lucius
ENSPSIG00000010255	SMARCAD1	100	72.919	ENSFCAG00000003958	SMARCAD1	100	84.757	Felis_catus
ENSPSIG00000010255	SMARCAD1	100	75.265	ENSFALG00000006089	SMARCAD1	100	74.783	Ficedula_albicollis
ENSPSIG00000010255	SMARCAD1	100	72.919	ENSFDAG00000017027	SMARCAD1	100	72.823	Fukomys_damarensis
ENSPSIG00000010255	SMARCAD1	65	65.672	ENSFHEG00000012778	smarcad1a	69	60.719	Fundulus_heteroclitus
ENSPSIG00000010255	SMARCAD1	83	57.773	ENSGMOG00000018995	smarcad1a	97	57.639	Gadus_morhua
ENSPSIG00000010255	SMARCAD1	85	74.490	ENSGALG00000037339	SMARCAD1	99	73.583	Gallus_gallus
ENSPSIG00000010255	SMARCAD1	61	67.508	ENSGAFG00000013498	smarcad1a	60	67.508	Gambusia_affinis
ENSPSIG00000010255	SMARCAD1	84	57.955	ENSGACG00000007327	smarcad1a	99	57.841	Gasterosteus_aculeatus
ENSPSIG00000010255	SMARCAD1	100	92.560	ENSGAGG00000008582	SMARCAD1	100	91.884	Gopherus_agassizii
ENSPSIG00000010255	SMARCAD1	100	73.301	ENSGGOG00000023001	SMARCAD1	100	73.206	Gorilla_gorilla
ENSPSIG00000010255	SMARCAD1	66	64.791	ENSHBUG00000011042	smarcad1a	71	61.406	Haplochromis_burtoni
ENSPSIG00000010255	SMARCAD1	100	73.014	ENSHGLG00000005070	SMARCAD1	100	72.510	Heterocephalus_glaber_female
ENSPSIG00000010255	SMARCAD1	100	73.014	ENSHGLG00100006812	SMARCAD1	100	72.510	Heterocephalus_glaber_male
ENSPSIG00000010255	SMARCAD1	91	64.907	ENSHCOG00000007848	smarcad1a	59	64.907	Hippocampus_comes
ENSPSIG00000010255	SMARCAD1	92	52.680	ENSIPUG00000022817	smarcad1b	99	52.941	Ictalurus_punctatus
ENSPSIG00000010255	SMARCAD1	62	65.156	ENSIPUG00000000242	smarcad1a	75	59.675	Ictalurus_punctatus
ENSPSIG00000010255	SMARCAD1	100	72.823	ENSSTOG00000001227	SMARCAD1	100	72.727	Ictidomys_tridecemlineatus
ENSPSIG00000010255	SMARCAD1	100	72.727	ENSJJAG00000022342	Smarcad1	100	72.632	Jaculus_jaculus
ENSPSIG00000010255	SMARCAD1	68	63.932	ENSLBEG00000008088	smarcad1a	65	63.932	Labrus_bergylta
ENSPSIG00000010255	SMARCAD1	100	56.721	ENSLOCG00000012909	smarcad1a	100	57.184	Lepisosteus_oculatus
ENSPSIG00000010255	SMARCAD1	100	71.360	ENSLAFG00000000040	SMARCAD1	100	71.360	Loxodonta_africana
ENSPSIG00000010255	SMARCAD1	100	73.206	ENSMFAG00000042606	SMARCAD1	100	77.405	Macaca_fascicularis
ENSPSIG00000010255	SMARCAD1	86	77.405	ENSMMUG00000022242	SMARCAD1	100	77.405	Macaca_mulatta
ENSPSIG00000010255	SMARCAD1	100	73.301	ENSMNEG00000038117	SMARCAD1	100	84.590	Macaca_nemestrina
ENSPSIG00000010255	SMARCAD1	100	73.206	ENSMLEG00000038333	SMARCAD1	100	84.422	Mandrillus_leucophaeus
ENSPSIG00000010255	SMARCAD1	68	65.576	ENSMAMG00000000933	smarcad1a	69	63.329	Mastacembelus_armatus
ENSPSIG00000010255	SMARCAD1	79	64.791	ENSMZEG00005005203	smarcad1a	90	56.142	Maylandia_zebra
ENSPSIG00000010255	SMARCAD1	92	68.551	ENSMGAG00000005577	SMARCAD1	100	68.551	Meleagris_gallopavo
ENSPSIG00000010255	SMARCAD1	100	71.935	ENSMAUG00000008417	Smarcad1	100	71.456	Mesocricetus_auratus
ENSPSIG00000010255	SMARCAD1	100	72.970	ENSMICG00000009746	SMARCAD1	100	73.066	Microcebus_murinus
ENSPSIG00000010255	SMARCAD1	100	71.333	ENSMOCG00000017142	Smarcad1	100	70.734	Microtus_ochrogaster
ENSPSIG00000010255	SMARCAD1	77	59.774	ENSMMOG00000000275	smarcad1a	93	65.294	Mola_mola
ENSPSIG00000010255	SMARCAD1	100	74.000	ENSMODG00000019268	SMARCAD1	100	74.237	Monodelphis_domestica
ENSPSIG00000010255	SMARCAD1	95	76.561	MGP_CAROLIEiJ_G0028458	-	77	76.561	Mus_caroli
ENSPSIG00000010255	SMARCAD1	100	71.374	ENSMUSG00000029920	Smarcad1	100	71.374	Mus_musculus
ENSPSIG00000010255	SMARCAD1	100	71.593	MGP_PahariEiJ_G0022198	Smarcad1	100	71.593	Mus_pahari
ENSPSIG00000010255	SMARCAD1	100	71.716	MGP_SPRETEiJ_G0029462	Smarcad1	100	71.716	Mus_spretus
ENSPSIG00000010255	SMARCAD1	100	73.040	ENSMPUG00000002111	SMARCAD1	100	72.945	Mustela_putorius_furo
ENSPSIG00000010255	SMARCAD1	100	72.371	ENSMLUG00000000425	SMARCAD1	100	72.467	Myotis_lucifugus
ENSPSIG00000010255	SMARCAD1	100	71.935	ENSNGAG00000000810	Smarcad1	100	71.552	Nannospalax_galili
ENSPSIG00000010255	SMARCAD1	65	64.497	ENSNBRG00000012749	smarcad1a	87	61.058	Neolamprologus_brichardi
ENSPSIG00000010255	SMARCAD1	100	73.301	ENSNLEG00000014225	SMARCAD1	100	84.422	Nomascus_leucogenys
ENSPSIG00000010255	SMARCAD1	100	72.588	ENSODEG00000004334	SMARCAD1	100	72.302	Octodon_degus
ENSPSIG00000010255	SMARCAD1	63	67.797	ENSONIG00000015059	smarcad1a	89	59.318	Oreochromis_niloticus
ENSPSIG00000010255	SMARCAD1	79	82.005	ENSOANG00000013764	SMARCAD1	99	82.005	Ornithorhynchus_anatinus
ENSPSIG00000010255	SMARCAD1	100	73.154	ENSOCUG00000017283	SMARCAD1	100	73.058	Oryctolagus_cuniculus
ENSPSIG00000010255	SMARCAD1	91	67.757	ENSORLG00000004869	smarcad1a	98	61.454	Oryzias_latipes
ENSPSIG00000010255	SMARCAD1	91	67.757	ENSORLG00020020569	smarcad1a	98	61.591	Oryzias_latipes_hni
ENSPSIG00000010255	SMARCAD1	91	67.601	ENSORLG00015009045	smarcad1a	91	61.918	Oryzias_latipes_hsok
ENSPSIG00000010255	SMARCAD1	65	66.216	ENSOMEG00000023032	smarcad1a	70	62.772	Oryzias_melastigma
ENSPSIG00000010255	SMARCAD1	100	71.920	ENSOGAG00000011444	SMARCAD1	100	71.824	Otolemur_garnettii
ENSPSIG00000010255	SMARCAD1	100	73.136	ENSOARG00000017851	SMARCAD1	100	73.040	Ovis_aries
ENSPSIG00000010255	SMARCAD1	100	73.301	ENSPPAG00000035715	SMARCAD1	100	73.206	Pan_paniscus
ENSPSIG00000010255	SMARCAD1	100	72.919	ENSPPRG00000024756	SMARCAD1	100	84.757	Panthera_pardus
ENSPSIG00000010255	SMARCAD1	100	72.779	ENSPTIG00000017868	SMARCAD1	100	72.684	Panthera_tigris_altaica
ENSPSIG00000010255	SMARCAD1	100	73.301	ENSPTRG00000023126	SMARCAD1	100	84.422	Pan_troglodytes
ENSPSIG00000010255	SMARCAD1	100	72.137	ENSPANG00000019757	SMARCAD1	100	72.042	Papio_anubis
ENSPSIG00000010255	SMARCAD1	62	66.254	ENSPMGG00000010735	smarcad1a	99	62.623	Periophthalmus_magnuspinnatus
ENSPSIG00000010255	SMARCAD1	100	61.315	ENSPEMG00000001854	Smarcad1	100	61.219	Peromyscus_maniculatus_bairdii
ENSPSIG00000010255	SMARCAD1	99	47.264	ENSPMAG00000003516	smarcad1a	99	46.742	Petromyzon_marinus
ENSPSIG00000010255	SMARCAD1	76	83.100	ENSPCIG00000008137	SMARCAD1	98	84.290	Phascolarctos_cinereus
ENSPSIG00000010255	SMARCAD1	74	67.601	ENSPREG00000018185	smarcad1a	98	61.373	Poecilia_reticulata
ENSPSIG00000010255	SMARCAD1	100	72.823	ENSPPYG00000014935	SMARCAD1	100	72.727	Pongo_abelii
ENSPSIG00000010255	SMARCAD1	86	70.604	ENSPCOG00000020478	SMARCAD1	99	70.604	Propithecus_coquereli
ENSPSIG00000010255	SMARCAD1	100	71.729	ENSPVAG00000001760	SMARCAD1	100	71.633	Pteropus_vampyrus
ENSPSIG00000010255	SMARCAD1	65	64.201	ENSPNYG00000010087	smarcad1a	88	60.787	Pundamilia_nyererei
ENSPSIG00000010255	SMARCAD1	85	55.876	ENSPNAG00000001663	smarcad1a	91	55.543	Pygocentrus_nattereri
ENSPSIG00000010255	SMARCAD1	94	52.515	ENSPNAG00000010099	smarcad1b	99	52.515	Pygocentrus_nattereri
ENSPSIG00000010255	SMARCAD1	100	71.743	ENSRNOG00000006391	Smarcad1	100	71.648	Rattus_norvegicus
ENSPSIG00000010255	SMARCAD1	100	73.206	ENSRBIG00000041989	SMARCAD1	100	73.110	Rhinopithecus_bieti
ENSPSIG00000010255	SMARCAD1	100	73.206	ENSRROG00000035309	SMARCAD1	100	73.110	Rhinopithecus_roxellana
ENSPSIG00000010255	SMARCAD1	100	73.110	ENSSBOG00000032114	SMARCAD1	100	84.255	Saimiri_boliviensis_boliviensis
ENSPSIG00000010255	SMARCAD1	100	74.881	ENSSHAG00000001279	SMARCAD1	100	74.712	Sarcophilus_harrisii
ENSPSIG00000010255	SMARCAD1	84	56.278	ENSSFOG00015016814	smarcad1b	96	53.414	Scleropages_formosus
ENSPSIG00000010255	SMARCAD1	74	57.915	ENSSFOG00015020909	smarcad1a	100	57.915	Scleropages_formosus
ENSPSIG00000010255	SMARCAD1	66	65.130	ENSSMAG00000001326	smarcad1a	70	61.691	Scophthalmus_maximus
ENSPSIG00000010255	SMARCAD1	66	64.224	ENSSDUG00000022338	smarcad1a	88	61.446	Seriola_dumerili
ENSPSIG00000010255	SMARCAD1	89	63.793	ENSSLDG00000024986	smarcad1a	99	61.044	Seriola_lalandi_dorsalis
ENSPSIG00000010255	SMARCAD1	58	89.112	ENSSPUG00000004633	SMARCAD1	100	89.112	Sphenodon_punctatus
ENSPSIG00000010255	SMARCAD1	68	64.681	ENSSPAG00000001970	smarcad1a	64	64.681	Stegastes_partitus
ENSPSIG00000010255	SMARCAD1	100	73.327	ENSSSCG00000009193	SMARCAD1	100	78.343	Sus_scrofa
ENSPSIG00000010255	SMARCAD1	76	81.132	ENSTGUG00000003127	SMARCAD1	99	81.589	Taeniopygia_guttata
ENSPSIG00000010255	SMARCAD1	85	57.514	ENSTNIG00000017585	smarcad1a	99	57.514	Tetraodon_nigroviridis
ENSPSIG00000010255	SMARCAD1	90	85.516	ENSTBEG00000002789	SMARCAD1	91	85.516	Tupaia_belangeri
ENSPSIG00000010255	SMARCAD1	95	74.949	ENSTTRG00000000226	SMARCAD1	98	75.356	Tursiops_truncatus
ENSPSIG00000010255	SMARCAD1	100	72.849	ENSUAMG00000022262	SMARCAD1	99	81.402	Ursus_americanus
ENSPSIG00000010255	SMARCAD1	100	73.110	ENSUMAG00000004549	SMARCAD1	100	73.110	Ursus_maritimus
ENSPSIG00000010255	SMARCAD1	100	72.945	ENSVVUG00000007271	SMARCAD1	97	81.450	Vulpes_vulpes
ENSPSIG00000010255	SMARCAD1	83	66.363	ENSXETG00000019214	smarcad1	100	66.363	Xenopus_tropicalis
ENSPSIG00000010255	SMARCAD1	76	59.772	ENSXCOG00000005232	smarcad1a	86	62.606	Xiphophorus_couchianus
ENSPSIG00000010255	SMARCAD1	68	63.805	ENSXMAG00000015350	smarcad1a	67	61.321	Xiphophorus_maculatus