EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000010328 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 4272 bases
Position: chrJH212619.1:48422-52693
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000011428	zf-C2H2	PF00096.26	5.1e-54	1	8
ENSPSIP00000011428	zf-C2H2	PF00096.26	5.1e-54	2	8
ENSPSIP00000011428	zf-C2H2	PF00096.26	5.1e-54	3	8
ENSPSIP00000011428	zf-C2H2	PF00096.26	5.1e-54	4	8
ENSPSIP00000011428	zf-C2H2	PF00096.26	5.1e-54	5	8
ENSPSIP00000011428	zf-C2H2	PF00096.26	5.1e-54	6	8
ENSPSIP00000011428	zf-C2H2	PF00096.26	5.1e-54	7	8
ENSPSIP00000011428	zf-C2H2	PF00096.26	5.1e-54	8	8
ENSPSIP00000011428	zf-met	PF12874.7	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000011485	-	1377	-	ENSPSIP00000011428	458 (aa)	-	K7FTR8

Gene Model

Click here to download ENSPSIG00000010328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000010328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000010328	-	97	51.899	ENSPSIG00000010248	-	93	51.899
ENSPSIG00000010328	-	97	56.972	ENSPSIG00000016380	-	97	55.639
ENSPSIG00000010328	-	78	53.302	ENSPSIG00000000522	-	91	53.302
ENSPSIG00000010328	-	68	49.189	ENSPSIG00000001739	-	99	49.189
ENSPSIG00000010328	-	75	53.879	ENSPSIG00000009650	-	70	54.113
ENSPSIG00000010328	-	71	37.975	ENSPSIG00000013505	PRDM5	77	38.785
ENSPSIG00000010328	-	66	44.595	ENSPSIG00000016395	SNAI2	85	44.595
ENSPSIG00000010328	-	96	44.954	ENSPSIG00000005672	-	97	42.892
ENSPSIG00000010328	-	71	55.602	ENSPSIG00000002569	-	79	55.602
ENSPSIG00000010328	-	66	41.071	ENSPSIG00000011896	ZIC3	55	41.071
ENSPSIG00000010328	-	96	48.571	ENSPSIG00000005603	-	95	48.571
ENSPSIG00000010328	-	87	49.378	ENSPSIG00000000333	-	96	49.378
ENSPSIG00000010328	-	98	52.093	ENSPSIG00000015465	-	99	54.741
ENSPSIG00000010328	-	82	34.146	ENSPSIG00000005522	ZNF646	93	45.000
ENSPSIG00000010328	-	75	48.765	ENSPSIG00000003152	-	79	48.765
ENSPSIG00000010328	-	76	45.033	ENSPSIG00000008588	-	100	45.033
ENSPSIG00000010328	-	97	55.921	ENSPSIG00000012865	-	98	55.921
ENSPSIG00000010328	-	68	44.118	ENSPSIG00000012112	GFI1B	53	44.118
ENSPSIG00000010328	-	88	34.555	ENSPSIG00000006944	PRDM15	54	34.555
ENSPSIG00000010328	-	94	42.500	ENSPSIG00000009893	-	99	42.500
ENSPSIG00000010328	-	67	42.169	ENSPSIG00000000943	ZNF770	99	42.169
ENSPSIG00000010328	-	80	44.737	ENSPSIG00000004262	SNAI3	87	44.737
ENSPSIG00000010328	-	90	41.615	ENSPSIG00000009270	-	87	41.615
ENSPSIG00000010328	-	96	46.388	ENSPSIG00000013021	-	97	46.388
ENSPSIG00000010328	-	66	40.000	ENSPSIG00000006586	-	99	40.206
ENSPSIG00000010328	-	73	47.500	ENSPSIG00000009603	-	99	47.099
ENSPSIG00000010328	-	72	33.636	ENSPSIG00000011562	-	85	33.636
ENSPSIG00000010328	-	71	37.383	ENSPSIG00000004303	ZNF319	92	37.383
ENSPSIG00000010328	-	75	47.347	ENSPSIG00000005128	-	97	47.347
ENSPSIG00000010328	-	71	49.798	ENSPSIG00000016247	-	60	48.454
ENSPSIG00000010328	-	96	43.805	ENSPSIG00000004502	-	83	40.618
ENSPSIG00000010328	-	66	40.506	ENSPSIG00000014208	-	51	40.506
ENSPSIG00000010328	-	97	47.561	ENSPSIG00000004614	-	99	47.561
ENSPSIG00000010328	-	74	42.349	ENSPSIG00000000075	-	71	42.349
ENSPSIG00000010328	-	64	40.491	ENSPSIG00000004682	ZNF652	66	40.491
ENSPSIG00000010328	-	79	50.847	ENSPSIG00000015216	-	96	49.789
ENSPSIG00000010328	-	75	46.226	ENSPSIG00000016033	-	57	46.226
ENSPSIG00000010328	-	71	48.447	ENSPSIG00000006790	-	89	48.447
ENSPSIG00000010328	-	98	62.791	ENSPSIG00000002565	-	87	62.791
ENSPSIG00000010328	-	96	50.237	ENSPSIG00000015459	-	96	50.237
ENSPSIG00000010328	-	68	37.306	ENSPSIG00000018010	ZBTB47	54	35.023
ENSPSIG00000010328	-	72	34.091	ENSPSIG00000016553	-	59	34.091
ENSPSIG00000010328	-	73	46.288	ENSPSIG00000000672	-	85	46.288
ENSPSIG00000010328	-	81	48.649	ENSPSIG00000012650	-	85	48.649
ENSPSIG00000010328	-	71	51.393	ENSPSIG00000001026	-	91	51.393
ENSPSIG00000010328	-	85	33.103	ENSPSIG00000003607	SNAI1	90	34.507
ENSPSIG00000010328	-	72	48.889	ENSPSIG00000010405	-	99	48.117
ENSPSIG00000010328	-	81	43.836	ENSPSIG00000000760	-	91	43.836

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000010328	-	68	45.850	ENSACAG00000024898	-	98	45.850	Anolis_carolinensis
ENSPSIG00000010328	-	97	46.569	ENSACAG00000024956	-	99	46.569	Anolis_carolinensis
ENSPSIG00000010328	-	83	52.766	ENSACAG00000008664	-	70	52.766	Anolis_carolinensis
ENSPSIG00000010328	-	71	48.523	ENSAMXG00000034847	-	90	48.523	Astyanax_mexicanus
ENSPSIG00000010328	-	71	51.827	ENSAMXG00000038636	-	98	51.827	Astyanax_mexicanus
ENSPSIG00000010328	-	71	47.973	ENSAMXG00000010805	-	94	47.973	Astyanax_mexicanus
ENSPSIG00000010328	-	75	50.000	ENSAMXG00000038325	-	92	49.362	Astyanax_mexicanus
ENSPSIG00000010328	-	74	48.299	ENSAMXG00000038536	-	89	48.299	Astyanax_mexicanus
ENSPSIG00000010328	-	71	48.500	ENSAMXG00000032841	-	78	48.500	Astyanax_mexicanus
ENSPSIG00000010328	-	75	42.411	ENSAMXG00000035246	-	74	42.411	Astyanax_mexicanus
ENSPSIG00000010328	-	71	53.097	ENSAMXG00000042784	-	94	53.097	Astyanax_mexicanus
ENSPSIG00000010328	-	71	50.347	ENSAMXG00000036233	-	83	50.347	Astyanax_mexicanus
ENSPSIG00000010328	-	71	52.471	ENSAMXG00000025452	-	99	52.471	Astyanax_mexicanus
ENSPSIG00000010328	-	74	48.148	ENSAMXG00000042746	-	86	48.148	Astyanax_mexicanus
ENSPSIG00000010328	-	73	46.863	ENSAMXG00000034344	-	77	46.863	Astyanax_mexicanus
ENSPSIG00000010328	-	76	43.939	ENSBTAG00000038322	-	96	43.939	Bos_taurus
ENSPSIG00000010328	-	75	45.923	ENSCPBG00000001526	-	89	45.923	Chrysemys_picta_bellii
ENSPSIG00000010328	-	76	39.863	ENSCPBG00000013652	-	66	40.426	Chrysemys_picta_bellii
ENSPSIG00000010328	-	90	37.826	ENSCPBG00000008580	-	100	38.710	Chrysemys_picta_bellii
ENSPSIG00000010328	-	71	53.333	ENSCPBG00000026433	-	63	53.333	Chrysemys_picta_bellii
ENSPSIG00000010328	-	66	46.237	ENSCSAVG00000010960	-	100	46.237	Ciona_savignyi
ENSPSIG00000010328	-	77	43.893	ENSDNOG00000047495	-	98	40.758	Dasypus_novemcinctus
ENSPSIG00000010328	-	71	47.826	ENSEBUG00000011694	-	95	47.826	Eptatretus_burgeri
ENSPSIG00000010328	-	67	40.523	ENSEBUG00000015837	-	73	40.523	Eptatretus_burgeri
ENSPSIG00000010328	-	73	41.237	ENSEBUG00000005264	-	73	41.237	Eptatretus_burgeri
ENSPSIG00000010328	-	100	46.690	ENSEBUG00000008306	-	99	46.690	Eptatretus_burgeri
ENSPSIG00000010328	-	100	50.463	ENSEBUG00000011435	-	99	50.463	Eptatretus_burgeri
ENSPSIG00000010328	-	72	46.400	ENSEBUG00000002075	-	76	46.622	Eptatretus_burgeri
ENSPSIG00000010328	-	99	48.630	ENSEBUG00000012919	-	99	48.630	Eptatretus_burgeri
ENSPSIG00000010328	-	71	36.842	ENSEBUG00000014717	-	72	36.842	Eptatretus_burgeri
ENSPSIG00000010328	-	71	35.632	ENSEBUG00000013875	-	83	35.632	Eptatretus_burgeri
ENSPSIG00000010328	-	74	43.243	ENSEASG00005004469	-	94	42.803	Equus_asinus_asinus
ENSPSIG00000010328	-	66	41.333	ENSGMOG00000018506	-	100	41.333	Gadus_morhua
ENSPSIG00000010328	-	72	48.264	ENSGALG00000055127	-	72	48.264	Gallus_gallus
ENSPSIG00000010328	-	76	49.814	ENSGALG00000054325	-	98	49.814	Gallus_gallus
ENSPSIG00000010328	-	100	49.451	ENSGALG00000044069	-	84	49.451	Gallus_gallus
ENSPSIG00000010328	-	71	51.331	ENSGALG00000046336	-	99	51.331	Gallus_gallus
ENSPSIG00000010328	-	66	48.739	ENSGALG00000049609	-	58	48.739	Gallus_gallus
ENSPSIG00000010328	-	93	50.993	ENSGALG00000053507	-	99	50.993	Gallus_gallus
ENSPSIG00000010328	-	58	44.361	ENSGACG00000006283	-	88	44.361	Gasterosteus_aculeatus
ENSPSIG00000010328	-	75	49.735	ENSGAGG00000011399	-	91	49.735	Gopherus_agassizii
ENSPSIG00000010328	-	84	42.199	ENSGAGG00000018885	-	75	42.199	Gopherus_agassizii
ENSPSIG00000010328	-	79	48.501	ENSGAGG00000011366	-	95	48.501	Gopherus_agassizii
ENSPSIG00000010328	-	68	44.792	ENSHCOG00000018201	-	83	44.792	Hippocampus_comes
ENSPSIG00000010328	-	99	46.713	ENSIPUG00000015468	-	96	50.855	Ictalurus_punctatus
ENSPSIG00000010328	-	72	50.000	ENSIPUG00000021515	-	85	50.000	Ictalurus_punctatus
ENSPSIG00000010328	-	77	44.196	ENSIPUG00000012109	ZN12	58	44.196	Ictalurus_punctatus
ENSPSIG00000010328	-	68	51.232	ENSJJAG00000023633	Zfp672	92	50.725	Jaculus_jaculus
ENSPSIG00000010328	-	97	43.131	ENSLACG00000022211	-	99	43.131	Latimeria_chalumnae
ENSPSIG00000010328	-	70	40.969	ENSLACG00000009005	-	100	40.969	Latimeria_chalumnae
ENSPSIG00000010328	-	66	37.153	ENSLACG00000005264	-	96	37.743	Latimeria_chalumnae
ENSPSIG00000010328	-	71	45.486	ENSLOCG00000017864	-	99	45.486	Lepisosteus_oculatus
ENSPSIG00000010328	-	74	51.701	ENSMGAG00000013362	-	100	51.701	Meleagris_gallopavo
ENSPSIG00000010328	-	72	51.232	ENSMAUG00000009945	Zfp672	89	50.725	Mesocricetus_auratus
ENSPSIG00000010328	-	72	47.445	ENSMMOG00000003923	-	83	47.445	Mola_mola
ENSPSIG00000010328	-	97	43.051	ENSMODG00000010532	-	99	43.051	Monodelphis_domestica
ENSPSIG00000010328	-	96	44.397	ENSMODG00000001880	-	99	44.397	Monodelphis_domestica
ENSPSIG00000010328	-	97	46.256	MGP_CAROLIEiJ_G0030502	-	93	40.127	Mus_caroli
ENSPSIG00000010328	-	66	51.232	MGP_CAROLIEiJ_G0016391	Zfp672	88	50.725	Mus_caroli
ENSPSIG00000010328	-	97	42.803	ENSMUSG00000030823	9130019O22Rik	91	41.456	Mus_musculus
ENSPSIG00000010328	-	66	51.232	MGP_SPRETEiJ_G0017233	Zfp672	90	50.725	Mus_spretus
ENSPSIG00000010328	-	65	47.727	MGP_SPRETEiJ_G0031613	-	84	47.727	Mus_spretus
ENSPSIG00000010328	-	96	40.203	ENSNGAG00000015777	Zim1	94	41.554	Nannospalax_galili
ENSPSIG00000010328	-	64	44.531	ENSNBRG00000007276	-	50	44.531	Neolamprologus_brichardi
ENSPSIG00000010328	-	66	39.145	ENSNBRG00000000708	-	90	41.319	Neolamprologus_brichardi
ENSPSIG00000010328	-	63	47.500	ENSORLG00020001922	-	85	45.865	Oryzias_latipes_hni
ENSPSIG00000010328	-	63	49.587	ENSOMEG00000001598	-	81	49.587	Oryzias_melastigma
ENSPSIG00000010328	-	79	37.209	ENSPREG00000002642	-	98	37.209	Poecilia_reticulata
ENSPSIG00000010328	-	69	46.250	ENSPNYG00000015486	-	60	46.250	Pundamilia_nyererei
ENSPSIG00000010328	-	75	52.995	ENSPNAG00000018395	-	59	54.225	Pygocentrus_nattereri
ENSPSIG00000010328	-	80	54.945	ENSPNAG00000000088	-	97	54.945	Pygocentrus_nattereri
ENSPSIG00000010328	-	66	51.724	ENSRNOG00000002713	Zfp672	88	49.123	Rattus_norvegicus
ENSPSIG00000010328	-	99	43.144	ENSSHAG00000018106	-	100	43.144	Sarcophilus_harrisii
ENSPSIG00000010328	-	71	48.464	ENSSFOG00015019818	-	81	50.000	Scleropages_formosus
ENSPSIG00000010328	-	68	37.188	ENSSMAG00000004252	-	90	35.068	Scophthalmus_maximus
ENSPSIG00000010328	-	75	48.173	ENSSPUG00000010016	-	93	49.421	Sphenodon_punctatus
ENSPSIG00000010328	-	82	56.757	ENSSPUG00000004366	-	67	56.757	Sphenodon_punctatus
ENSPSIG00000010328	-	66	50.459	ENSSPAG00000021653	-	79	50.459	Stegastes_partitus
ENSPSIG00000010328	-	70	51.587	ENSTGUG00000015210	-	100	51.525	Taeniopygia_guttata
ENSPSIG00000010328	-	74	57.407	ENSTGUG00000018351	-	99	57.407	Taeniopygia_guttata
ENSPSIG00000010328	-	78	41.631	ENSTRUG00000022066	-	88	43.229	Takifugu_rubripes
ENSPSIG00000010328	-	74	44.628	ENSXETG00000031192	-	100	46.154	Xenopus_tropicalis
ENSPSIG00000010328	-	66	51.528	ENSXCOG00000006553	-	87	51.528	Xiphophorus_couchianus
ENSPSIG00000010328	-	87	38.776	ENSXMAG00000026680	-	94	38.776	Xiphophorus_maculatus