EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000010699 (Gene tree)
Gene ID: 102463556
Gene Symbol: TARBP1
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 115116 bases
Position: chrJH208531.1:2196706-2311821
Accession: 102463556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000011852	SpoU_methylase	PF00588.19	4.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000011909	TARBP1-201	4243	XM_006122081	ENSPSIP00000011852	1279 (aa)	XP_025039886	K7FUZ2

Gene Model

Click here to download ENSPSIG00000010699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000010699's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000010699	TARBP1	100	71.008	ENSG00000059588	TARBP1	79	71.085	Homo_sapiens
ENSPSIG00000010699	TARBP1	99	46.012	ENSAPOG00000016419	si:dkey-85a20.4	79	46.012	Acanthochromis_polyacanthus
ENSPSIG00000010699	TARBP1	99	69.099	ENSAMEG00000003359	TARBP1	94	69.099	Ailuropoda_melanoleuca
ENSPSIG00000010699	TARBP1	99	44.769	ENSATEG00000020266	si:dkey-85a20.4	79	44.769	Anabas_testudineus
ENSPSIG00000010699	TARBP1	100	77.683	ENSAPLG00000007666	TARBP1	98	78.123	Anas_platyrhynchos
ENSPSIG00000010699	TARBP1	98	69.206	ENSACAG00000001142	TARBP1	79	69.206	Anolis_carolinensis
ENSPSIG00000010699	TARBP1	99	70.181	ENSANAG00000022031	TARBP1	81	70.260	Aotus_nancymaae
ENSPSIG00000010699	TARBP1	99	69.953	ENSBTAG00000004517	TARBP1	77	76.078	Bos_taurus
ENSPSIG00000010699	TARBP1	100	70.620	ENSCJAG00000018155	TARBP1	79	70.698	Callithrix_jacchus
ENSPSIG00000010699	TARBP1	99	69.171	ENSCAFG00000011533	TARBP1	91	69.464	Canis_familiaris
ENSPSIG00000010699	TARBP1	99	69.440	ENSCAFG00020027141	TARBP1	79	69.440	Canis_lupus_dingo
ENSPSIG00000010699	TARBP1	99	69.440	ENSCHIG00000011437	TARBP1	79	69.673	Capra_hircus
ENSPSIG00000010699	TARBP1	100	69.033	ENSTSYG00000010382	TARBP1	95	69.033	Carlito_syrichta
ENSPSIG00000010699	TARBP1	99	59.483	ENSCAPG00000010831	TARBP1	99	59.906	Cavia_aperea
ENSPSIG00000010699	TARBP1	99	65.888	ENSCPOG00000013995	TARBP1	80	66.226	Cavia_porcellus
ENSPSIG00000010699	TARBP1	95	76.073	ENSCCAG00000037278	TARBP1	78	76.073	Cebus_capucinus
ENSPSIG00000010699	TARBP1	100	70.775	ENSCATG00000011754	TARBP1	79	70.698	Cercocebus_atys
ENSPSIG00000010699	TARBP1	99	66.277	ENSCLAG00000003655	TARBP1	94	66.459	Chinchilla_lanigera
ENSPSIG00000010699	TARBP1	100	70.620	ENSCSAG00000010100	TARBP1	99	70.620	Chlorocebus_sabaeus
ENSPSIG00000010699	TARBP1	93	89.443	ENSCPBG00000005587	TARBP1	80	89.443	Chrysemys_picta_bellii
ENSPSIG00000010699	TARBP1	100	70.930	ENSCANG00000034343	TARBP1	94	70.930	Colobus_angolensis_palliatus
ENSPSIG00000010699	TARBP1	99	64.981	ENSCGRG00001016690	Tarbp1	81	64.981	Cricetulus_griseus_chok1gshd
ENSPSIG00000010699	TARBP1	99	64.981	ENSCGRG00000016893	Tarbp1	87	64.981	Cricetulus_griseus_crigri
ENSPSIG00000010699	TARBP1	99	42.352	ENSCSEG00000005255	si:dkey-85a20.4	78	46.890	Cynoglossus_semilaevis
ENSPSIG00000010699	TARBP1	99	45.872	ENSDARG00000079055	si:dkey-85a20.4	99	54.561	Danio_rerio
ENSPSIG00000010699	TARBP1	100	70.316	ENSDNOG00000008637	TARBP1	78	70.547	Dasypus_novemcinctus
ENSPSIG00000010699	TARBP1	99	64.041	ENSDORG00000007984	Tarbp1	99	64.119	Dipodomys_ordii
ENSPSIG00000010699	TARBP1	99	71.151	ENSEASG00005000252	TARBP1	80	71.151	Equus_asinus_asinus
ENSPSIG00000010699	TARBP1	99	71.328	ENSECAG00000023673	TARBP1	78	73.448	Equus_caballus
ENSPSIG00000010699	TARBP1	99	45.223	ENSELUG00000012193	si:dkey-85a20.4	80	45.300	Esox_lucius
ENSPSIG00000010699	TARBP1	99	66.641	ENSFCAG00000014183	TARBP1	79	66.641	Felis_catus
ENSPSIG00000010699	TARBP1	99	76.457	ENSFALG00000013565	TARBP1	98	75.816	Ficedula_albicollis
ENSPSIG00000010699	TARBP1	99	64.751	ENSFDAG00000001308	TARBP1	99	64.855	Fukomys_damarensis
ENSPSIG00000010699	TARBP1	92	55.840	ENSFHEG00000007565	si:dkey-85a20.4	77	55.840	Fundulus_heteroclitus
ENSPSIG00000010699	TARBP1	99	43.779	ENSGMOG00000004549	si:dkey-85a20.4	93	43.856	Gadus_morhua
ENSPSIG00000010699	TARBP1	100	70.333	ENSGALG00000011000	TARBP1	80	71.108	Gallus_gallus
ENSPSIG00000010699	TARBP1	99	46.278	ENSGAFG00000007387	si:dkey-85a20.4	79	46.201	Gambusia_affinis
ENSPSIG00000010699	TARBP1	99	46.237	ENSGACG00000005865	si:dkey-85a20.4	91	46.160	Gasterosteus_aculeatus
ENSPSIG00000010699	TARBP1	100	89.682	ENSGAGG00000012102	TARBP1	83	89.682	Gopherus_agassizii
ENSPSIG00000010699	TARBP1	100	68.600	ENSGGOG00000022879	TARBP1	94	68.677	Gorilla_gorilla
ENSPSIG00000010699	TARBP1	99	46.973	ENSHBUG00000008877	si:dkey-85a20.4	79	47.126	Haplochromis_burtoni
ENSPSIG00000010699	TARBP1	99	67.263	ENSHGLG00000011592	TARBP1	80	67.444	Heterocephalus_glaber_female
ENSPSIG00000010699	TARBP1	99	67.186	ENSHGLG00100015169	TARBP1	88	67.186	Heterocephalus_glaber_male
ENSPSIG00000010699	TARBP1	98	45.242	ENSIPUG00000005249	si:dkey-85a20.4	77	45.476	Ictalurus_punctatus
ENSPSIG00000010699	TARBP1	99	64.766	ENSSTOG00000032291	TARBP1	92	64.844	Ictidomys_tridecemlineatus
ENSPSIG00000010699	TARBP1	99	61.413	ENSJJAG00000017840	Tarbp1	88	61.413	Jaculus_jaculus
ENSPSIG00000010699	TARBP1	75	48.684	ENSKMAG00000017546	si:dkey-85a20.4	64	48.928	Kryptolebias_marmoratus
ENSPSIG00000010699	TARBP1	74	51.070	ENSLBEG00000012132	si:dkey-85a20.4	70	51.070	Labrus_bergylta
ENSPSIG00000010699	TARBP1	99	57.980	ENSLACG00000004337	TARBP1	79	57.980	Latimeria_chalumnae
ENSPSIG00000010699	TARBP1	99	52.636	ENSLOCG00000016214	si:dkey-85a20.4	79	52.636	Lepisosteus_oculatus
ENSPSIG00000010699	TARBP1	99	70.031	ENSLAFG00000011394	TARBP1	81	70.031	Loxodonta_africana
ENSPSIG00000010699	TARBP1	100	68.087	ENSMFAG00000041068	TARBP1	80	68.009	Macaca_fascicularis
ENSPSIG00000010699	TARBP1	100	68.242	ENSMMUG00000021703	TARBP1	79	68.164	Macaca_mulatta
ENSPSIG00000010699	TARBP1	100	70.775	ENSMNEG00000045002	TARBP1	79	70.775	Macaca_nemestrina
ENSPSIG00000010699	TARBP1	100	70.698	ENSMLEG00000044182	TARBP1	95	70.698	Mandrillus_leucophaeus
ENSPSIG00000010699	TARBP1	99	46.465	ENSMAMG00000021760	si:dkey-85a20.4	80	46.465	Mastacembelus_armatus
ENSPSIG00000010699	TARBP1	99	46.897	ENSMZEG00005005751	si:dkey-85a20.4	79	47.050	Maylandia_zebra
ENSPSIG00000010699	TARBP1	99	64.798	ENSMAUG00000020968	Tarbp1	81	64.798	Mesocricetus_auratus
ENSPSIG00000010699	TARBP1	99	62.286	ENSMICG00000015280	TARBP1	78	62.286	Microcebus_murinus
ENSPSIG00000010699	TARBP1	99	64.614	ENSMOCG00000004128	Tarbp1	81	64.614	Microtus_ochrogaster
ENSPSIG00000010699	TARBP1	99	44.771	ENSMMOG00000007795	si:dkey-85a20.4	79	45.081	Mola_mola
ENSPSIG00000010699	TARBP1	100	73.011	ENSMODG00000008504	TARBP1	78	73.011	Monodelphis_domestica
ENSPSIG00000010699	TARBP1	99	45.476	ENSMALG00000002916	si:dkey-85a20.4	79	45.859	Monopterus_albus
ENSPSIG00000010699	TARBP1	99	64.692	MGP_CAROLIEiJ_G0031729	Tarbp1	78	75.486	Mus_caroli
ENSPSIG00000010699	TARBP1	99	64.536	ENSMUSG00000090290	Tarbp1	81	64.536	Mus_musculus
ENSPSIG00000010699	TARBP1	99	64.386	MGP_PahariEiJ_G0023326	Tarbp1	81	64.386	Mus_pahari
ENSPSIG00000010699	TARBP1	99	64.458	MGP_SPRETEiJ_G0032846	Tarbp1	81	64.458	Mus_spretus
ENSPSIG00000010699	TARBP1	97	69.144	ENSMPUG00000002802	TARBP1	99	69.144	Mustela_putorius_furo
ENSPSIG00000010699	TARBP1	99	63.251	ENSMLUG00000002414	TARBP1	94	63.482	Myotis_lucifugus
ENSPSIG00000010699	TARBP1	100	70.853	ENSNLEG00000002518	TARBP1	79	70.930	Nomascus_leucogenys
ENSPSIG00000010699	TARBP1	79	75.042	ENSOPRG00000013822	TARBP1	62	75.042	Ochotona_princeps
ENSPSIG00000010699	TARBP1	99	66.745	ENSODEG00000005238	TARBP1	83	66.926	Octodon_degus
ENSPSIG00000010699	TARBP1	99	46.784	ENSONIG00000009789	si:dkey-85a20.4	92	46.937	Oreochromis_niloticus
ENSPSIG00000010699	TARBP1	99	68.974	ENSOCUG00000017418	TARBP1	79	69.051	Oryctolagus_cuniculus
ENSPSIG00000010699	TARBP1	99	45.035	ENSORLG00000010529	si:dkey-85a20.4	78	45.251	Oryzias_latipes
ENSPSIG00000010699	TARBP1	99	44.958	ENSORLG00020019264	si:dkey-85a20.4	78	45.174	Oryzias_latipes_hni
ENSPSIG00000010699	TARBP1	99	44.727	ENSORLG00015003276	si:dkey-85a20.4	78	44.942	Oryzias_latipes_hsok
ENSPSIG00000010699	TARBP1	100	66.977	ENSOGAG00000002379	TARBP1	79	66.977	Otolemur_garnettii
ENSPSIG00000010699	TARBP1	99	69.255	ENSOARG00000003434	TARBP1	85	69.488	Ovis_aries
ENSPSIG00000010699	TARBP1	100	71.008	ENSPPAG00000028097	TARBP1	94	71.085	Pan_paniscus
ENSPSIG00000010699	TARBP1	99	66.563	ENSPPRG00000013561	TARBP1	83	61.658	Panthera_pardus
ENSPSIG00000010699	TARBP1	99	69.129	ENSPTIG00000009281	TARBP1	95	69.129	Panthera_tigris_altaica
ENSPSIG00000010699	TARBP1	100	71.008	ENSPTRG00000002124	TARBP1	79	71.085	Pan_troglodytes
ENSPSIG00000010699	TARBP1	100	70.620	ENSPANG00000021933	TARBP1	79	70.620	Papio_anubis
ENSPSIG00000010699	TARBP1	99	47.312	ENSPKIG00000016716	si:dkey-85a20.4	78	47.389	Paramormyrops_kingsleyae
ENSPSIG00000010699	TARBP1	99	64.829	ENSPEMG00000006888	Tarbp1	85	64.829	Peromyscus_maniculatus_bairdii
ENSPSIG00000010699	TARBP1	90	86.893	ENSPCIG00000029710	TARBP1	76	86.893	Phascolarctos_cinereus
ENSPSIG00000010699	TARBP1	99	45.894	ENSPFOG00000013020	si:dkey-85a20.4	92	45.894	Poecilia_formosa
ENSPSIG00000010699	TARBP1	99	45.888	ENSPLAG00000006044	si:dkey-85a20.4	79	45.811	Poecilia_latipinna
ENSPSIG00000010699	TARBP1	99	45.894	ENSPMEG00000017857	si:dkey-85a20.4	79	45.817	Poecilia_mexicana
ENSPSIG00000010699	TARBP1	99	46.195	ENSPREG00000022753	si:dkey-85a20.4	79	46.042	Poecilia_reticulata
ENSPSIG00000010699	TARBP1	89	80.645	ENSPPYG00000000102	TARBP1	77	80.645	Pongo_abelii
ENSPSIG00000010699	TARBP1	81	87.500	ENSPCAG00000004808	TARBP1	65	87.500	Procavia_capensis
ENSPSIG00000010699	TARBP1	99	67.237	ENSPCOG00000005666	TARBP1	79	67.237	Propithecus_coquereli
ENSPSIG00000010699	TARBP1	99	56.942	ENSPVAG00000014798	TARBP1	80	56.942	Pteropus_vampyrus
ENSPSIG00000010699	TARBP1	99	46.023	ENSPNYG00000019135	si:dkey-85a20.4	78	46.178	Pundamilia_nyererei
ENSPSIG00000010699	TARBP1	99	61.652	ENSRNOG00000053574	Tarbp1	81	61.652	Rattus_norvegicus
ENSPSIG00000010699	TARBP1	100	65.891	ENSRBIG00000043362	TARBP1	87	65.891	Rhinopithecus_bieti
ENSPSIG00000010699	TARBP1	100	70.930	ENSRROG00000029527	TARBP1	83	70.853	Rhinopithecus_roxellana
ENSPSIG00000010699	TARBP1	100	70.411	ENSSBOG00000034503	TARBP1	92	70.543	Saimiri_boliviensis_boliviensis
ENSPSIG00000010699	TARBP1	100	72.411	ENSSHAG00000000013	TARBP1	95	72.411	Sarcophilus_harrisii
ENSPSIG00000010699	TARBP1	99	46.565	ENSSFOG00015002660	si:dkey-85a20.4	95	46.183	Scleropages_formosus
ENSPSIG00000010699	TARBP1	99	47.181	ENSSMAG00000007081	si:dkey-85a20.4	77	47.259	Scophthalmus_maximus
ENSPSIG00000010699	TARBP1	99	44.643	ENSSDUG00000023566	si:dkey-85a20.4	79	44.798	Seriola_dumerili
ENSPSIG00000010699	TARBP1	99	46.338	ENSSLDG00000020200	si:dkey-85a20.4	79	46.492	Seriola_lalandi_dorsalis
ENSPSIG00000010699	TARBP1	94	78.837	ENSSARG00000012207	TARBP1	74	78.837	Sorex_araneus
ENSPSIG00000010699	TARBP1	100	76.279	ENSSPUG00000015364	TARBP1	79	75.814	Sphenodon_punctatus
ENSPSIG00000010699	TARBP1	99	46.385	ENSSPAG00000007213	si:dkey-85a20.4	79	46.385	Stegastes_partitus
ENSPSIG00000010699	TARBP1	95	81.818	ENSSSCG00000010160	TARBP1	78	81.818	Sus_scrofa
ENSPSIG00000010699	TARBP1	99	76.599	ENSTGUG00000010214	TARBP1	98	76.599	Taeniopygia_guttata
ENSPSIG00000010699	TARBP1	99	46.082	ENSTNIG00000016586	si:dkey-85a20.4	94	46.512	Tetraodon_nigroviridis
ENSPSIG00000010699	TARBP1	94	65.677	ENSTTRG00000008707	TARBP1	78	65.924	Tursiops_truncatus
ENSPSIG00000010699	TARBP1	99	68.634	ENSUMAG00000006730	TARBP1	96	68.634	Ursus_maritimus
ENSPSIG00000010699	TARBP1	85	86.598	ENSVPAG00000007665	TARBP1	75	86.598	Vicugna_pacos
ENSPSIG00000010699	TARBP1	99	69.782	ENSVVUG00000007460	TARBP1	95	71.875	Vulpes_vulpes
ENSPSIG00000010699	TARBP1	99	58.482	ENSXETG00000016224	tarbp1	94	58.482	Xenopus_tropicalis
ENSPSIG00000010699	TARBP1	91	50.408	ENSXCOG00000011779	si:dkey-85a20.4	86	50.408	Xiphophorus_couchianus
ENSPSIG00000010699	TARBP1	82	44.579	ENSXMAG00000009600	si:dkey-85a20.4	100	44.486	Xiphophorus_maculatus