EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000010713 (Gene tree)
Gene ID: 102463723
Gene Symbol: PRPF4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 20707 bases
Position: chrJH207194.1:1121503-1142209
Accession: 102463723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000011859	PRP4	PF08799.11	3.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000011916	PRPF4-201	5802	XM_006117359	ENSPSIP00000011859	569 (aa)	XP_006117421	K7FUZ9

Gene Model

Click here to download ENSPSIG00000010713's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000010713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000010713	PRPF4	51	32.500	ENSPSIG00000014809	POC1A	83	32.500
ENSPSIG00000010713	PRPF4	52	32.121	ENSPSIG00000004298	POC1B	62	32.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000010713	PRPF4	91	90.154	ENSG00000136875	PRPF4	100	89.635	Homo_sapiens
ENSPSIG00000010713	PRPF4	89	76.715	ENSAPOG00000014132	prpf4	98	76.715	Acanthochromis_polyacanthus
ENSPSIG00000010713	PRPF4	96	86.630	ENSAMEG00000013048	PRPF4	99	86.630	Ailuropoda_melanoleuca
ENSPSIG00000010713	PRPF4	89	76.726	ENSACIG00000005579	prpf4	99	76.726	Amphilophus_citrinellus
ENSPSIG00000010713	PRPF4	89	75.591	ENSAOCG00000005457	prpf4	100	75.342	Amphiprion_ocellaris
ENSPSIG00000010713	PRPF4	89	75.394	ENSAPEG00000000776	prpf4	100	75.147	Amphiprion_percula
ENSPSIG00000010713	PRPF4	89	75.937	ENSATEG00000023013	prpf4	99	75.937	Anabas_testudineus
ENSPSIG00000010713	PRPF4	90	92.203	ENSAPLG00000006534	PRPF4	96	92.203	Anas_platyrhynchos
ENSPSIG00000010713	PRPF4	92	89.866	ENSACAG00000015110	PRPF4	100	89.866	Anolis_carolinensis
ENSPSIG00000010713	PRPF4	91	90.347	ENSANAG00000022464	PRPF4	96	89.827	Aotus_nancymaae
ENSPSIG00000010713	PRPF4	89	76.331	ENSACLG00000019031	prpf4	100	76.078	Astatotilapia_calliptera
ENSPSIG00000010713	PRPF4	89	61.377	ENSAMXG00000006756	prpf4	100	72.584	Astyanax_mexicanus
ENSPSIG00000010713	PRPF4	90	91.016	ENSBTAG00000004571	PRPF4	98	91.016	Bos_taurus
ENSPSIG00000010713	PRPF4	83	44.937	WBGene00007972	prp-4	96	44.842	Caenorhabditis_elegans
ENSPSIG00000010713	PRPF4	90	91.051	ENSCJAG00000017856	PRPF4	98	91.051	Callithrix_jacchus
ENSPSIG00000010713	PRPF4	91	90.347	ENSCAFG00000003224	PRPF4	97	89.827	Canis_familiaris
ENSPSIG00000010713	PRPF4	91	90.347	ENSCAFG00020022637	PRPF4	99	91.051	Canis_lupus_dingo
ENSPSIG00000010713	PRPF4	90	91.051	ENSCHIG00000024648	-	98	91.051	Capra_hircus
ENSPSIG00000010713	PRPF4	91	90.154	ENSTSYG00000010366	PRPF4	99	90.154	Carlito_syrichta
ENSPSIG00000010713	PRPF4	73	83.055	ENSCAPG00000008935	PRPF4	97	83.055	Cavia_aperea
ENSPSIG00000010713	PRPF4	91	84.333	ENSCPOG00000014729	-	99	84.333	Cavia_porcellus
ENSPSIG00000010713	PRPF4	91	89.575	ENSCPOG00000010747	-	100	89.060	Cavia_porcellus
ENSPSIG00000010713	PRPF4	95	87.963	ENSCCAG00000028990	PRPF4	100	90.019	Cebus_capucinus
ENSPSIG00000010713	PRPF4	89	91.881	ENSCATG00000021552	PRPF4	100	89.827	Cercocebus_atys
ENSPSIG00000010713	PRPF4	91	89.768	ENSCLAG00000013448	PRPF4	100	89.251	Chinchilla_lanigera
ENSPSIG00000010713	PRPF4	79	90.708	ENSCHOG00000007233	PRPF4	100	90.708	Choloepus_hoffmanni
ENSPSIG00000010713	PRPF4	90	96.437	ENSCPBG00000019136	PRPF4	74	96.296	Chrysemys_picta_bellii
ENSPSIG00000010713	PRPF4	90	57.364	ENSCING00000001299	-	99	57.364	Ciona_intestinalis
ENSPSIG00000010713	PRPF4	86	59.109	ENSCSAVG00000009178	-	99	59.524	Ciona_savignyi
ENSPSIG00000010713	PRPF4	91	90.347	ENSCANG00000003246	PRPF4	100	89.827	Colobus_angolensis_palliatus
ENSPSIG00000010713	PRPF4	91	89.961	ENSCGRG00001016992	Prpf4	100	89.443	Cricetulus_griseus_chok1gshd
ENSPSIG00000010713	PRPF4	91	89.961	ENSCGRG00000017560	Prpf4	100	89.443	Cricetulus_griseus_crigri
ENSPSIG00000010713	PRPF4	89	75.787	ENSCSEG00000020451	prpf4	100	75.787	Cynoglossus_semilaevis
ENSPSIG00000010713	PRPF4	89	78.698	ENSDARG00000067639	prpf4	100	78.698	Danio_rerio
ENSPSIG00000010713	PRPF4	89	91.356	ENSDNOG00000013203	PRPF4	98	91.356	Dasypus_novemcinctus
ENSPSIG00000010713	PRPF4	91	90.347	ENSDORG00000026275	Prpf4	100	89.827	Dipodomys_ordii
ENSPSIG00000010713	PRPF4	80	57.330	FBgn0036733	U4-U6-60K	99	50.817	Drosophila_melanogaster
ENSPSIG00000010713	PRPF4	90	89.903	ENSETEG00000020389	PRPF4	98	89.903	Echinops_telfairi
ENSPSIG00000010713	PRPF4	89	70.946	ENSEBUG00000015229	prpf4	88	71.396	Eptatretus_burgeri
ENSPSIG00000010713	PRPF4	91	90.347	ENSEASG00005022678	PRPF4	100	89.827	Equus_asinus_asinus
ENSPSIG00000010713	PRPF4	91	90.347	ENSECAG00000007072	PRPF4	100	89.827	Equus_caballus
ENSPSIG00000010713	PRPF4	90	70.889	ENSEEUG00000007480	PRPF4	98	70.889	Erinaceus_europaeus
ENSPSIG00000010713	PRPF4	89	79.093	ENSELUG00000007510	prpf4	100	79.093	Esox_lucius
ENSPSIG00000010713	PRPF4	90	91.051	ENSFCAG00000005514	PRPF4	98	91.051	Felis_catus
ENSPSIG00000010713	PRPF4	90	90.359	ENSFALG00000005423	PRPF4	87	90.359	Ficedula_albicollis
ENSPSIG00000010713	PRPF4	91	89.575	ENSFDAG00000005839	PRPF4	100	89.060	Fukomys_damarensis
ENSPSIG00000010713	PRPF4	89	76.331	ENSFHEG00000001300	prpf4	100	76.078	Fundulus_heteroclitus
ENSPSIG00000010713	PRPF4	90	92.172	ENSGALG00000008857	PRPF4	95	92.172	Gallus_gallus
ENSPSIG00000010713	PRPF4	58	71.687	ENSGAFG00000012164	prpf4	68	71.687	Gambusia_affinis
ENSPSIG00000010713	PRPF4	89	68.359	ENSGACG00000015476	prpf4	99	67.969	Gasterosteus_aculeatus
ENSPSIG00000010713	PRPF4	90	96.296	ENSGAGG00000025029	PRPF4	95	96.296	Gopherus_agassizii
ENSPSIG00000010713	PRPF4	97	86.364	ENSGGOG00000006943	PRPF4	100	89.635	Gorilla_gorilla
ENSPSIG00000010713	PRPF4	89	76.134	ENSHBUG00000000562	prpf4	100	75.882	Haplochromis_burtoni
ENSPSIG00000010713	PRPF4	92	71.209	ENSHGLG00000003838	-	100	71.209	Heterocephalus_glaber_female
ENSPSIG00000010713	PRPF4	91	89.575	ENSHGLG00000015191	PRPF4	100	89.060	Heterocephalus_glaber_female
ENSPSIG00000010713	PRPF4	90	75.195	ENSHGLG00000016628	-	98	75.977	Heterocephalus_glaber_female
ENSPSIG00000010713	PRPF4	92	71.209	ENSHGLG00100005571	-	100	71.209	Heterocephalus_glaber_male
ENSPSIG00000010713	PRPF4	89	77.120	ENSIPUG00000017956	PRPF4	100	77.120	Ictalurus_punctatus
ENSPSIG00000010713	PRPF4	91	90.154	ENSSTOG00000027833	PRPF4	100	89.635	Ictidomys_tridecemlineatus
ENSPSIG00000010713	PRPF4	91	90.154	ENSJJAG00000008838	Prpf4	100	89.635	Jaculus_jaculus
ENSPSIG00000010713	PRPF4	89	76.134	ENSKMAG00000013236	prpf4	99	76.134	Kryptolebias_marmoratus
ENSPSIG00000010713	PRPF4	89	75.644	ENSLBEG00000020611	prpf4	99	75.644	Labrus_bergylta
ENSPSIG00000010713	PRPF4	91	79.383	ENSLACG00000016317	PRPF4	99	79.383	Latimeria_chalumnae
ENSPSIG00000010713	PRPF4	89	80.868	ENSLOCG00000000581	prpf4	100	80.868	Lepisosteus_oculatus
ENSPSIG00000010713	PRPF4	90	91.228	ENSLAFG00000018225	PRPF4	100	89.847	Loxodonta_africana
ENSPSIG00000010713	PRPF4	89	91.683	ENSMFAG00000039397	PRPF4	100	89.635	Macaca_fascicularis
ENSPSIG00000010713	PRPF4	89	91.881	ENSMMUG00000005844	PRPF4	100	89.827	Macaca_mulatta
ENSPSIG00000010713	PRPF4	89	81.980	ENSMNEG00000033737	PRPF4	100	80.230	Macaca_nemestrina
ENSPSIG00000010713	PRPF4	89	91.881	ENSMLEG00000040284	PRPF4	100	89.827	Mandrillus_leucophaeus
ENSPSIG00000010713	PRPF4	89	75.686	ENSMAMG00000020141	prpf4	100	75.686	Mastacembelus_armatus
ENSPSIG00000010713	PRPF4	89	76.331	ENSMZEG00005023205	prpf4	100	76.078	Maylandia_zebra
ENSPSIG00000010713	PRPF4	90	91.961	ENSMGAG00000001796	PRPF4	95	91.961	Meleagris_gallopavo
ENSPSIG00000010713	PRPF4	90	90.784	ENSMAUG00000018022	Prpf4	100	89.060	Mesocricetus_auratus
ENSPSIG00000010713	PRPF4	90	90.588	ENSMICG00000015022	PRPF4	98	90.078	Microcebus_murinus
ENSPSIG00000010713	PRPF4	91	89.575	ENSMOCG00000018273	Prpf4	100	89.060	Microtus_ochrogaster
ENSPSIG00000010713	PRPF4	89	75.787	ENSMMOG00000021177	prpf4	100	75.787	Mola_mola
ENSPSIG00000010713	PRPF4	90	90.411	ENSMODG00000004444	-	98	90.411	Monodelphis_domestica
ENSPSIG00000010713	PRPF4	90	90.411	ENSMODG00000025096	-	96	89.382	Monodelphis_domestica
ENSPSIG00000010713	PRPF4	89	76.134	ENSMALG00000013624	prpf4	99	76.134	Monopterus_albus
ENSPSIG00000010713	PRPF4	90	90.998	MGP_CAROLIEiJ_G0026078	Prpf4	100	89.443	Mus_caroli
ENSPSIG00000010713	PRPF4	90	90.998	ENSMUSG00000066148	Prpf4	100	89.443	Mus_musculus
ENSPSIG00000010713	PRPF4	90	90.802	MGP_PahariEiJ_G0028413	Prpf4	100	89.251	Mus_pahari
ENSPSIG00000010713	PRPF4	90	90.998	MGP_SPRETEiJ_G0027042	Prpf4	100	89.443	Mus_spretus
ENSPSIG00000010713	PRPF4	91	90.347	ENSMPUG00000007883	PRPF4	100	89.827	Mustela_putorius_furo
ENSPSIG00000010713	PRPF4	90	89.432	ENSMLUG00000008626	-	96	89.432	Myotis_lucifugus
ENSPSIG00000010713	PRPF4	91	90.135	ENSMLUG00000015309	-	96	90.135	Myotis_lucifugus
ENSPSIG00000010713	PRPF4	91	84.942	ENSNGAG00000000468	Prpf4	100	84.453	Nannospalax_galili
ENSPSIG00000010713	PRPF4	89	76.529	ENSNBRG00000007972	prpf4	100	76.275	Neolamprologus_brichardi
ENSPSIG00000010713	PRPF4	91	90.347	ENSNLEG00000016647	PRPF4	100	89.827	Nomascus_leucogenys
ENSPSIG00000010713	PRPF4	90	90.411	ENSMEUG00000013256	PRPF4	99	90.411	Notamacropus_eugenii
ENSPSIG00000010713	PRPF4	90	90.856	ENSOPRG00000005302	PRPF4	98	90.856	Ochotona_princeps
ENSPSIG00000010713	PRPF4	91	89.961	ENSODEG00000018147	PRPF4	100	89.443	Octodon_degus
ENSPSIG00000010713	PRPF4	89	76.331	ENSONIG00000012671	prpf4	100	76.078	Oreochromis_niloticus
ENSPSIG00000010713	PRPF4	91	90.541	ENSOCUG00000005046	PRPF4	100	90.019	Oryctolagus_cuniculus
ENSPSIG00000010713	PRPF4	89	74.606	ENSORLG00000019641	prpf4	100	74.606	Oryzias_latipes
ENSPSIG00000010713	PRPF4	89	74.606	ENSORLG00020019438	prpf4	100	74.606	Oryzias_latipes_hni
ENSPSIG00000010713	PRPF4	89	74.636	ENSOMEG00000020941	prpf4	100	74.636	Oryzias_melastigma
ENSPSIG00000010713	PRPF4	91	86.100	ENSOGAG00000007802	PRPF4	98	85.605	Otolemur_garnettii
ENSPSIG00000010713	PRPF4	95	87.918	ENSOARG00000006319	PRPF4	99	87.918	Ovis_aries
ENSPSIG00000010713	PRPF4	97	86.364	ENSPPAG00000041797	PRPF4	100	89.635	Pan_paniscus
ENSPSIG00000010713	PRPF4	91	90.347	ENSPPRG00000014360	PRPF4	100	89.827	Panthera_pardus
ENSPSIG00000010713	PRPF4	91	90.347	ENSPTIG00000009574	PRPF4	100	89.827	Panthera_tigris_altaica
ENSPSIG00000010713	PRPF4	97	86.364	ENSPTRG00000021274	PRPF4	98	90.856	Pan_troglodytes
ENSPSIG00000010713	PRPF4	89	91.683	ENSPANG00000025776	PRPF4	98	86.630	Papio_anubis
ENSPSIG00000010713	PRPF4	89	80.868	ENSPKIG00000017259	prpf4	100	80.868	Paramormyrops_kingsleyae
ENSPSIG00000010713	PRPF4	90	57.895	ENSPMGG00000000997	prpf4	99	57.713	Periophthalmus_magnuspinnatus
ENSPSIG00000010713	PRPF4	91	89.961	ENSPEMG00000024115	Prpf4	100	89.443	Peromyscus_maniculatus_bairdii
ENSPSIG00000010713	PRPF4	91	89.903	ENSPCIG00000003821	PRPF4	100	89.903	Phascolarctos_cinereus
ENSPSIG00000010713	PRPF4	89	69.472	ENSPFOG00000013524	prpf4	99	72.393	Poecilia_formosa
ENSPSIG00000010713	PRPF4	60	68.605	ENSPLAG00000011620	prpf4	99	68.405	Poecilia_latipinna
ENSPSIG00000010713	PRPF4	87	73.214	ENSPMEG00000006813	prpf4	99	73.214	Poecilia_mexicana
ENSPSIG00000010713	PRPF4	90	91.051	ENSPCAG00000002561	PRPF4	100	91.051	Procavia_capensis
ENSPSIG00000010713	PRPF4	90	91.373	ENSPCOG00000011975	PRPF4	100	89.635	Propithecus_coquereli
ENSPSIG00000010713	PRPF4	90	87.549	ENSPVAG00000004708	PRPF4	98	87.549	Pteropus_vampyrus
ENSPSIG00000010713	PRPF4	89	76.331	ENSPNYG00000008013	prpf4	100	76.078	Pundamilia_nyererei
ENSPSIG00000010713	PRPF4	89	78.107	ENSPNAG00000000697	prpf4	100	78.107	Pygocentrus_nattereri
ENSPSIG00000010713	PRPF4	90	90.802	ENSRNOG00000014777	Prpf4	100	89.251	Rattus_norvegicus
ENSPSIG00000010713	PRPF4	91	90.347	ENSRBIG00000040221	PRPF4	100	89.827	Rhinopithecus_bieti
ENSPSIG00000010713	PRPF4	91	90.347	ENSRROG00000040240	PRPF4	100	89.827	Rhinopithecus_roxellana
ENSPSIG00000010713	PRPF4	90	90.607	ENSSHAG00000017658	PRPF4	98	90.607	Sarcophilus_harrisii
ENSPSIG00000010713	PRPF4	89	81.460	ENSSFOG00015008963	prpf4	100	81.460	Scleropages_formosus
ENSPSIG00000010713	PRPF4	89	75.148	ENSSMAG00000008889	prpf4	99	75.148	Scophthalmus_maximus
ENSPSIG00000010713	PRPF4	89	72.638	ENSSDUG00000022083	prpf4	99	72.835	Seriola_dumerili
ENSPSIG00000010713	PRPF4	89	72.871	ENSSLDG00000008115	prpf4	98	73.069	Seriola_lalandi_dorsalis
ENSPSIG00000010713	PRPF4	90	93.333	ENSSPUG00000015582	PRPF4	98	93.333	Sphenodon_punctatus
ENSPSIG00000010713	PRPF4	89	70.392	ENSSPAG00000011286	prpf4	99	70.392	Stegastes_partitus
ENSPSIG00000010713	PRPF4	91	90.347	ENSSSCG00000024648	PRPF4	100	89.827	Sus_scrofa
ENSPSIG00000010713	PRPF4	87	92.292	ENSTGUG00000002623	PRPF4	100	92.434	Taeniopygia_guttata
ENSPSIG00000010713	PRPF4	89	75.442	ENSTRUG00000008853	prpf4	100	75.442	Takifugu_rubripes
ENSPSIG00000010713	PRPF4	89	76.181	ENSTNIG00000013250	prpf4	100	76.181	Tetraodon_nigroviridis
ENSPSIG00000010713	PRPF4	90	82.685	ENSTBEG00000000821	PRPF4	98	82.685	Tupaia_belangeri
ENSPSIG00000010713	PRPF4	75	96.512	ENSTTRG00000003246	PRPF4	85	96.512	Tursiops_truncatus
ENSPSIG00000010713	PRPF4	59	84.431	ENSUAMG00000018288	PRPF4	88	89.251	Ursus_americanus
ENSPSIG00000010713	PRPF4	91	89.961	ENSUMAG00000019375	PRPF4	100	89.443	Ursus_maritimus
ENSPSIG00000010713	PRPF4	90	90.856	ENSVPAG00000005281	PRPF4	98	90.856	Vicugna_pacos
ENSPSIG00000010713	PRPF4	91	89.272	ENSVVUG00000002476	PRPF4	99	91.287	Vulpes_vulpes
ENSPSIG00000010713	PRPF4	63	58.889	ENSXCOG00000006101	prpf4	93	59.852	Xiphophorus_couchianus
ENSPSIG00000010713	PRPF4	81	64.224	ENSXMAG00000002750	prpf4	99	65.226	Xiphophorus_maculatus