EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000011204 (Gene tree)
Gene ID: 102459371
Gene Symbol: -
Alias: -
Full Name: nucleophosmin 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 18646 bases
Position: chrJH206762.1:4003175-4021820
Accession: 102459371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000012540	Nucleoplasmin	PF03066.15	2.7e-40	1	1
ENSPSIP00000012546	Nucleoplasmin	PF03066.15	7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000012601	-	4002	XM_006115772	ENSPSIP00000012540	307 (aa)	XP_006115834	K7FWY0
ENSPSIT00000012607	-	936	-	ENSPSIP00000012546	312 (aa)	-	K7FWY6

Gene Model

Click here to download ENSPSIG00000011204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000011204's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000011204	-	92	47.945	ENSAPOG00000004268	npm1b	96	47.635	Acanthochromis_polyacanthus
ENSPSIG00000011204	-	92	46.207	ENSAOCG00000012549	npm1b	96	45.918	Amphiprion_ocellaris
ENSPSIG00000011204	-	92	46.690	ENSAPEG00000000868	npm1b	96	46.392	Amphiprion_percula
ENSPSIG00000011204	-	92	45.085	ENSATEG00000006254	npm1b	96	47.333	Anabas_testudineus
ENSPSIG00000011204	-	92	70.732	ENSACAG00000015626	-	96	75.087	Anolis_carolinensis
ENSPSIG00000011204	-	92	42.215	ENSAMXG00000042148	npm1b	97	43.434	Astyanax_mexicanus
ENSPSIG00000011204	-	81	46.538	ENSCAFG00000023359	-	98	46.875	Canis_familiaris
ENSPSIG00000011204	-	92	89.362	ENSCPBG00000021221	-	58	87.413	Chrysemys_picta_bellii
ENSPSIG00000011204	-	92	45.890	ENSCSEG00000004530	npm1b	96	46.284	Cynoglossus_semilaevis
ENSPSIG00000011204	-	92	45.918	ENSCVAG00000013016	npm1b	96	45.302	Cyprinodon_variegatus
ENSPSIG00000011204	-	92	46.048	ENSDARG00000037675	npm1b	97	45.763	Danio_rerio
ENSPSIG00000011204	-	92	41.892	ENSELUG00000022123	npm1b	95	41.472	Esox_lucius
ENSPSIG00000011204	-	91	76.325	ENSFALG00000003320	-	95	75.618	Ficedula_albicollis
ENSPSIG00000011204	-	92	45.085	ENSFHEG00000020794	npm1b	96	44.147	Fundulus_heteroclitus
ENSPSIG00000011204	-	92	42.424	ENSGMOG00000002689	npm1b	97	40.461	Gadus_morhua
ENSPSIG00000011204	-	92	77.936	ENSGALG00000002197	-	70	77.193	Gallus_gallus
ENSPSIG00000011204	-	92	41.438	ENSGAFG00000017709	npm1b	96	42.617	Gambusia_affinis
ENSPSIG00000011204	-	92	44.406	ENSGACG00000016706	npm1b	97	45.361	Gasterosteus_aculeatus
ENSPSIG00000011204	-	92	84.452	ENSGAGG00000020250	-	96	83.972	Gopherus_agassizii
ENSPSIG00000011204	-	92	44.178	ENSHBUG00000019903	npm1b	91	45.695	Haplochromis_burtoni
ENSPSIG00000011204	-	92	42.215	ENSHCOG00000003895	npm1b	96	44.710	Hippocampus_comes
ENSPSIG00000011204	-	92	43.051	ENSIPUG00000020165	npm1b	97	43.144	Ictalurus_punctatus
ENSPSIG00000011204	-	92	43.448	ENSKMAG00000008260	npm1b	97	44.444	Kryptolebias_marmoratus
ENSPSIG00000011204	-	86	46.831	ENSLACG00000001779	-	99	45.070	Latimeria_chalumnae
ENSPSIG00000011204	-	89	50.000	ENSLACG00000013460	-	86	52.490	Latimeria_chalumnae
ENSPSIG00000011204	-	90	39.604	ENSLOCG00000001942	npm1b	99	39.145	Lepisosteus_oculatus
ENSPSIG00000011204	-	68	46.667	ENSMAMG00000015335	npm1b	98	46.256	Mastacembelus_armatus
ENSPSIG00000011204	-	90	79.348	ENSMGAG00000001591	-	100	78.623	Meleagris_gallopavo
ENSPSIG00000011204	-	77	44.715	ENSMALG00000015383	npm1b	98	46.215	Monopterus_albus
ENSPSIG00000011204	-	92	43.643	ENSONIG00000001397	npm1b	95	41.892	Oreochromis_niloticus
ENSPSIG00000011204	-	92	38.676	ENSOMEG00000003414	npm1b	94	38.909	Oryzias_melastigma
ENSPSIG00000011204	-	92	46.179	ENSPKIG00000020050	npm1b	95	46.382	Paramormyrops_kingsleyae
ENSPSIG00000011204	-	90	38.929	ENSPMAG00000004930	npm1b	99	39.643	Petromyzon_marinus
ENSPSIG00000011204	-	92	44.558	ENSPFOG00000018357	npm1b	96	43.960	Poecilia_formosa
ENSPSIG00000011204	-	92	44.637	ENSPNAG00000005498	npm1b	97	44.027	Pygocentrus_nattereri
ENSPSIG00000011204	-	90	42.199	ENSSFOG00015005064	npm1b	95	42.254	Scleropages_formosus
ENSPSIG00000011204	-	93	42.712	ENSSMAG00000008088	npm1b	96	44.558	Scophthalmus_maximus
ENSPSIG00000011204	-	92	46.644	ENSSDUG00000007726	npm1b	96	46.644	Seriola_dumerili
ENSPSIG00000011204	-	92	46.980	ENSSLDG00000021396	npm1b	96	46.980	Seriola_lalandi_dorsalis
ENSPSIG00000011204	-	92	42.955	ENSSPAG00000011152	npm1b	96	46.780	Stegastes_partitus
ENSPSIG00000011204	-	90	77.778	ENSTGUG00000014970	-	100	77.061	Taeniopygia_guttata
ENSPSIG00000011204	-	92	44.097	ENSTRUG00000008105	npm1b	91	45.704	Takifugu_rubripes
ENSPSIG00000011204	-	92	43.206	ENSTNIG00000013057	npm1b	96	43.299	Tetraodon_nigroviridis
ENSPSIG00000011204	-	92	61.986	ENSXETG00000008403	npm1	96	61.986	Xenopus_tropicalis
ENSPSIG00000011204	-	92	43.537	ENSXMAG00000001986	npm1b	96	44.482	Xiphophorus_maculatus